RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
ZC3H4-201ENST00000253048 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
ZC3H4-201ENST00000253048 MT1LQ93083 61 aa4.59□□□□□ -1.67
ZC3H4-201ENST00000253048 MT1EP04732 61 aa4.58□□□□□ -1.68
ZC3H4-201ENST00000253048 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
ZC3H4-201ENST00000253048 MT1MQ8N339 61 aa4.52□□□□□ -1.69
ZC3H4-201ENST00000253048 KRTAP4-7Q9BYR0 210 aa4.49□□□□□ -1.69
ZC3H4-201ENST00000253048 MUC2Q02817 5179 aa4.46□□□□□ -1.7
ZC3H4-201ENST00000253048 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
ZC3H4-201ENST00000253048 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
ZC3H4-201ENST00000253048 UBR4Q5T4S7 5183 aa4.45□□□□□ -1.7
ZC3H4-201ENST00000253048 FAT4Q6V0I7 4981 aa4.43□□□□□ -1.7
ZC3H4-201ENST00000253048 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
ZC3H4-201ENST00000253048 HMCN2Q8NDA2 5059 aa4.41□□□□□ -1.7
ZC3H4-201ENST00000253048 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
ZC3H4-201ENST00000253048 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
ZC3H4-201ENST00000253048 PRM1P04553 51 aa4.35□□□□□ -1.71
ZC3H4-201ENST00000253048 FSIP2Q5CZC0 6907 aa4.34□□□□□ -1.72
ZC3H4-201ENST00000253048 LCE2AQ5TA79 106 aaPredicted RBP4.31□□□□□ -1.72
ZC3H4-201ENST00000253048 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
ZC3H4-201ENST00000253048 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.29□□□□□ -1.72
ZC3H4-201ENST00000253048 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
ZC3H4-201ENST00000253048 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
ZC3H4-201ENST00000253048 KRTAP2-1Q9BYU5 128 aa4.25□□□□□ -1.73
ZC3H4-201ENST00000253048 SYNE2Q8WXH0 6885 aaKnown RBP4.22□□□□□ -1.73
ZC3H4-201ENST00000253048 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
ZC3H4-201ENST00000253048 MT1AP04731 61 aa4.2□□□□□ -1.74
ZC3H4-201ENST00000253048 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
ZC3H4-201ENST00000253048 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
ZC3H4-201ENST00000253048 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
ZC3H4-201ENST00000253048 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
ZC3H4-201ENST00000253048 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
ZC3H4-201ENST00000253048 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
ZC3H4-201ENST00000253048 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
ZC3H4-201ENST00000253048 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
ZC3H4-201ENST00000253048 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
ZC3H4-201ENST00000253048 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
ZC3H4-201ENST00000253048 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.78
ZC3H4-201ENST00000253048 KMT2DO14686 5537 aa3.89□□□□□ -1.79
ZC3H4-201ENST00000253048 USH2AO75445 5202 aa3.87□□□□□ -1.79
ZC3H4-201ENST00000253048 FCGBPQ9Y6R7 5405 aaPredicted RBP3.85□□□□□ -1.79
ZC3H4-201ENST00000253048 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
ZC3H4-201ENST00000253048 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
ZC3H4-201ENST00000253048 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.8
ZC3H4-201ENST00000253048 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
ZC3H4-201ENST00000253048 NEBP20929 6669 aa3.53□□□□□ -1.84
ZC3H4-201ENST00000253048 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
ZC3H4-201ENST00000253048 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
ZC3H4-201ENST00000253048 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
ZC3H4-201ENST00000253048 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
ZC3H4-201ENST00000253048 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
ZC3H4-201ENST00000253048 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
ZC3H4-201ENST00000253048 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
ZC3H4-201ENST00000253048 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
ZC3H4-201ENST00000253048 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.9
ZC3H4-201ENST00000253048 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
ZC3H4-201ENST00000253048 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
ZC3H4-201ENST00000253048 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
ZC3H4-201ENST00000253048 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
ZC3H4-201ENST00000253048 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
ZC3H4-201ENST00000253048 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
ZC3H4-201ENST00000253048 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
ZC3H4-201ENST00000253048 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
ZC3H4-201ENST00000253048 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
ZC3H4-201ENST00000253048 KRTAP5-8O75690 187 aa2.54□□□□□ -2
ZC3H4-201ENST00000253048 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
ZC3H4-201ENST00000253048 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
ZC3H4-201ENST00000253048 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
ZC3H4-201ENST00000253048 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
ZC3H4-201ENST00000253048 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
ZC3H4-201ENST00000253048 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
ZC3H4-201ENST00000253048 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
ZC3H4-201ENST00000253048 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
ZC3H4-201ENST00000253048 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
ZC3H4-201ENST00000253048 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
ZC3H4-201ENST00000253048 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
ZC3H4-201ENST00000253048 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 7.4 ms