RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
ACTN4-201ENST00000252699 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
ACTN4-201ENST00000252699 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
ACTN4-201ENST00000252699 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
ACTN4-201ENST00000252699 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
ACTN4-201ENST00000252699 MT1MQ8N339 61 aa5.53□□□□□ -1.52
ACTN4-201ENST00000252699 KRTAP19-7Q3SYF9 63 aa5.52□□□□□ -1.53
ACTN4-201ENST00000252699 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
ACTN4-201ENST00000252699 KRTAP4-3Q9BYR4 195 aa5.42□□□□□ -1.54
ACTN4-201ENST00000252699 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
ACTN4-201ENST00000252699 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
ACTN4-201ENST00000252699 USH2AO75445 5202 aa5.28□□□□□ -1.56
ACTN4-201ENST00000252699 LCE3EQ5T5B0 92 aa5.21□□□□□ -1.58
ACTN4-201ENST00000252699 MT4P47944 62 aa5.14□□□□□ -1.59
ACTN4-201ENST00000252699 MT3P25713 68 aa5.11□□□□□ -1.59
ACTN4-201ENST00000252699 SYNE2Q8WXH0 6885 aaKnown RBP5.1□□□□□ -1.59
ACTN4-201ENST00000252699 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
ACTN4-201ENST00000252699 KRTAP6-3Q3LI67 103 aa5.06□□□□□ -1.6
ACTN4-201ENST00000252699 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
ACTN4-201ENST00000252699 MT1AP04731 61 aa5.05□□□□□ -1.6
ACTN4-201ENST00000252699 LCE5AQ5TCM9 118 aa5.03□□□□□ -1.6
ACTN4-201ENST00000252699 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
ACTN4-201ENST00000252699 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
ACTN4-201ENST00000252699 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
ACTN4-201ENST00000252699 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
ACTN4-201ENST00000252699 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
ACTN4-201ENST00000252699 KMT2DO14686 5537 aa4.97□□□□□ -1.61
ACTN4-201ENST00000252699 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
ACTN4-201ENST00000252699 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
ACTN4-201ENST00000252699 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
ACTN4-201ENST00000252699 SSPOA2VEC9 5147 aa4.88□□□□□ -1.63
ACTN4-201ENST00000252699 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
ACTN4-201ENST00000252699 MACF1Q9UPN3 7388 aaKnown RBP4.84□□□□□ -1.63
ACTN4-201ENST00000252699 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
ACTN4-201ENST00000252699 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
ACTN4-201ENST00000252699 MUC12Q9UKN1 5478 aa4.75□□□□□ -1.65
ACTN4-201ENST00000252699 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
ACTN4-201ENST00000252699 LCE1BQ5T7P3 118 aa4.7□□□□□ -1.66
ACTN4-201ENST00000252699 PRM1P04553 51 aa4.7□□□□□ -1.66
ACTN4-201ENST00000252699 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
ACTN4-201ENST00000252699 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
ACTN4-201ENST00000252699 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
ACTN4-201ENST00000252699 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
ACTN4-201ENST00000252699 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
ACTN4-201ENST00000252699 NEBP20929 6669 aa4.42□□□□□ -1.7
ACTN4-201ENST00000252699 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
ACTN4-201ENST00000252699 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
ACTN4-201ENST00000252699 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
ACTN4-201ENST00000252699 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
ACTN4-201ENST00000252699 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
ACTN4-201ENST00000252699 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
ACTN4-201ENST00000252699 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
ACTN4-201ENST00000252699 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
ACTN4-201ENST00000252699 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
ACTN4-201ENST00000252699 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
ACTN4-201ENST00000252699 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
ACTN4-201ENST00000252699 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
ACTN4-201ENST00000252699 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
ACTN4-201ENST00000252699 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
ACTN4-201ENST00000252699 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
ACTN4-201ENST00000252699 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
ACTN4-201ENST00000252699 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
ACTN4-201ENST00000252699 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
ACTN4-201ENST00000252699 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
ACTN4-201ENST00000252699 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
ACTN4-201ENST00000252699 KRTAP5-8O75690 187 aa3.15□□□□□ -1.9
ACTN4-201ENST00000252699 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
ACTN4-201ENST00000252699 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
ACTN4-201ENST00000252699 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
ACTN4-201ENST00000252699 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
ACTN4-201ENST00000252699 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
ACTN4-201ENST00000252699 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
ACTN4-201ENST00000252699 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
ACTN4-201ENST00000252699 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
ACTN4-201ENST00000252699 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
ACTN4-201ENST00000252699 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
ACTN4-201ENST00000252699 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms