RNA–Protein interactions for RNA: ENST00000249330.2

VGF-201, Transcript of VGF nerve growth factor inducible, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VGF, Length 2,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGF-201ENST00000249330 KRTAP2-3P0C7H8 128 aa6.98□□□□□ -1.29
VGF-201ENST00000249330 KRTAP2-4Q9BYR9 128 aa6.98□□□□□ -1.29
VGF-201ENST00000249330 KRTAP2-1Q9BYU5 128 aa6.98□□□□□ -1.29
VGF-201ENST00000249330 SYNE2Q8WXH0 6885 aaKnown RBP6.98□□□□□ -1.29
VGF-201ENST00000249330 MT1LQ93083 61 aa6.95□□□□□ -1.3
VGF-201ENST00000249330 KRTAP4-7Q9BYR0 210 aa6.93□□□□□ -1.3
VGF-201ENST00000249330 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.31
VGF-201ENST00000249330 SPRR2FQ96RM1 72 aa6.85□□□□□ -1.31
VGF-201ENST00000249330 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
VGF-201ENST00000249330 KRTAP19-3Q7Z4W3 81 aa6.74□□□□□ -1.33
VGF-201ENST00000249330 KRTAP4-3Q9BYR4 195 aa6.68□□□□□ -1.34
VGF-201ENST00000249330 MDN1Q9NU22 5596 aa6.67□□□□□ -1.34
VGF-201ENST00000249330 MT1GP13640 62 aa6.66□□□□□ -1.34
VGF-201ENST00000249330 MT1MQ8N339 61 aa6.64□□□□□ -1.35
VGF-201ENST00000249330 DSTQ03001 7570 aaKnown RBP6.62□□□□□ -1.35
VGF-201ENST00000249330 KRTAP5-9P26371 169 aa6.61□□□□□ -1.35
VGF-201ENST00000249330 LCE5AQ5TCM9 118 aa6.61□□□□□ -1.35
VGF-201ENST00000249330 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
VGF-201ENST00000249330 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
VGF-201ENST00000249330 LCE1AQ5T7P2 110 aa6.5□□□□□ -1.37
VGF-201ENST00000249330 SPRR2EP22531 72 aa6.42□□□□□ -1.38
VGF-201ENST00000249330 SPRR2BP35325 72 aa6.42□□□□□ -1.38
VGF-201ENST00000249330 SPRR2AP35326 72 aa6.42□□□□□ -1.38
VGF-201ENST00000249330 KRTAP6-3Q3LI67 103 aa6.39□□□□□ -1.39
VGF-201ENST00000249330 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
VGF-201ENST00000249330 KRTAP9-7A8MTY7 169 aa6.24□□□□□ -1.41
VGF-201ENST00000249330 SPRR2DP22532 72 aa6.16□□□□□ -1.42
VGF-201ENST00000249330 NEBP20929 6669 aa6.02□□□□□ -1.45
VGF-201ENST00000249330 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
VGF-201ENST00000249330 KRTAP5-5Q701N2 237 aaPredicted RBP5.95□□□□□ -1.46
VGF-201ENST00000249330 KRTAP6-1Q3LI64 71 aa5.91□□□□□ -1.46
VGF-201ENST00000249330 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.47
VGF-201ENST00000249330 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
VGF-201ENST00000249330 MT1AP04731 61 aa5.87□□□□□ -1.47
VGF-201ENST00000249330 LCE3DQ9BYE3 92 aa5.74□□□□□ -1.49
VGF-201ENST00000249330 LCE3EQ5T5B0 92 aa5.69□□□□□ -1.5
VGF-201ENST00000249330 PRM1P04553 51 aa5.57□□□□□ -1.52
VGF-201ENST00000249330 KRTAP9-4Q9BYQ2 154 aa5.57□□□□□ -1.52
VGF-201ENST00000249330 KRTAP5-4Q6L8H1 288 aa5.56□□□□□ -1.52
VGF-201ENST00000249330 KRTAP20-1Q3LI63 56 aa5.51□□□□□ -1.53
VGF-201ENST00000249330 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
VGF-201ENST00000249330 MT4P47944 62 aa5.45□□□□□ -1.54
VGF-201ENST00000249330 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
VGF-201ENST00000249330 KRTAP6-2Q3LI66 62 aa5.41□□□□□ -1.54
VGF-201ENST00000249330 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.54
VGF-201ENST00000249330 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
VGF-201ENST00000249330 MT3P25713 68 aa5.29□□□□□ -1.56
VGF-201ENST00000249330 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
VGF-201ENST00000249330 HMCN1Q96RW7 5635 aa5.26□□□□□ -1.57
VGF-201ENST00000249330 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
VGF-201ENST00000249330 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
VGF-201ENST00000249330 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
VGF-201ENST00000249330 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
VGF-201ENST00000249330 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
VGF-201ENST00000249330 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
VGF-201ENST00000249330 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
VGF-201ENST00000249330 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.7
VGF-201ENST00000249330 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
VGF-201ENST00000249330 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
VGF-201ENST00000249330 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
VGF-201ENST00000249330 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
VGF-201ENST00000249330 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
VGF-201ENST00000249330 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
VGF-201ENST00000249330 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
VGF-201ENST00000249330 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
VGF-201ENST00000249330 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
VGF-201ENST00000249330 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.8
VGF-201ENST00000249330 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
VGF-201ENST00000249330 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
VGF-201ENST00000249330 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
VGF-201ENST00000249330 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
VGF-201ENST00000249330 KRTAP21-1Q3LI58 79 aa3.56□□□□□ -1.84
VGF-201ENST00000249330 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
VGF-201ENST00000249330 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
VGF-201ENST00000249330 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
VGF-201ENST00000249330 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
VGF-201ENST00000249330 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 121.3 ms