RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
LRFN3-201ENST00000246529 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
LRFN3-201ENST00000246529 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
LRFN3-201ENST00000246529 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
LRFN3-201ENST00000246529 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
LRFN3-201ENST00000246529 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
LRFN3-201ENST00000246529 MT1MQ8N339 61 aa5.71□□□□□ -1.5
LRFN3-201ENST00000246529 MT1GP13640 62 aa5.7□□□□□ -1.5
LRFN3-201ENST00000246529 MACF1Q9UPN3 7388 aaKnown RBP5.69□□□□□ -1.5
LRFN3-201ENST00000246529 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
LRFN3-201ENST00000246529 CRCT1Q9UGL9 99 aa5.61□□□□□ -1.51
LRFN3-201ENST00000246529 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
LRFN3-201ENST00000246529 DSTQ03001 7570 aaKnown RBP5.6□□□□□ -1.51
LRFN3-201ENST00000246529 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
LRFN3-201ENST00000246529 SYNE2Q8WXH0 6885 aaKnown RBP5.54□□□□□ -1.52
LRFN3-201ENST00000246529 MDN1Q9NU22 5596 aa5.41□□□□□ -1.54
LRFN3-201ENST00000246529 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
LRFN3-201ENST00000246529 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
LRFN3-201ENST00000246529 KRTAP5-9P26371 169 aa5.23□□□□□ -1.57
LRFN3-201ENST00000246529 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
LRFN3-201ENST00000246529 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
LRFN3-201ENST00000246529 SPRR2EP22531 72 aa5.16□□□□□ -1.58
LRFN3-201ENST00000246529 SPRR2BP35325 72 aa5.16□□□□□ -1.58
LRFN3-201ENST00000246529 SPRR2AP35326 72 aa5.16□□□□□ -1.58
LRFN3-201ENST00000246529 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
LRFN3-201ENST00000246529 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
LRFN3-201ENST00000246529 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
LRFN3-201ENST00000246529 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
LRFN3-201ENST00000246529 MT1AP04731 61 aa5.07□□□□□ -1.6
LRFN3-201ENST00000246529 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
LRFN3-201ENST00000246529 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.02□□□□□ -1.61
LRFN3-201ENST00000246529 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
LRFN3-201ENST00000246529 SPRR2DP22532 72 aa4.93□□□□□ -1.62
LRFN3-201ENST00000246529 LCE3DQ9BYE3 92 aa4.83□□□□□ -1.64
LRFN3-201ENST00000246529 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
LRFN3-201ENST00000246529 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
LRFN3-201ENST00000246529 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
LRFN3-201ENST00000246529 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
LRFN3-201ENST00000246529 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
LRFN3-201ENST00000246529 NEBP20929 6669 aa4.61□□□□□ -1.67
LRFN3-201ENST00000246529 MT3P25713 68 aa4.56□□□□□ -1.68
LRFN3-201ENST00000246529 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
LRFN3-201ENST00000246529 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
LRFN3-201ENST00000246529 PRM1P04553 51 aa4.5□□□□□ -1.69
LRFN3-201ENST00000246529 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
LRFN3-201ENST00000246529 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
LRFN3-201ENST00000246529 MT4P47944 62 aa4.39□□□□□ -1.71
LRFN3-201ENST00000246529 LCE1DQ5T752 114 aa4.34□□□□□ -1.71
LRFN3-201ENST00000246529 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
LRFN3-201ENST00000246529 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
LRFN3-201ENST00000246529 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
LRFN3-201ENST00000246529 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
LRFN3-201ENST00000246529 KRTAP5-2Q701N4 177 aa4.18□□□□□ -1.74
LRFN3-201ENST00000246529 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
LRFN3-201ENST00000246529 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
LRFN3-201ENST00000246529 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
LRFN3-201ENST00000246529 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
LRFN3-201ENST00000246529 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
LRFN3-201ENST00000246529 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
LRFN3-201ENST00000246529 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
LRFN3-201ENST00000246529 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
LRFN3-201ENST00000246529 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
LRFN3-201ENST00000246529 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
LRFN3-201ENST00000246529 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
LRFN3-201ENST00000246529 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
LRFN3-201ENST00000246529 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
LRFN3-201ENST00000246529 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
LRFN3-201ENST00000246529 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
LRFN3-201ENST00000246529 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
LRFN3-201ENST00000246529 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
LRFN3-201ENST00000246529 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
LRFN3-201ENST00000246529 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
LRFN3-201ENST00000246529 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
LRFN3-201ENST00000246529 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
LRFN3-201ENST00000246529 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
LRFN3-201ENST00000246529 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
LRFN3-201ENST00000246529 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 132.6 ms