RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 KRTAP4-3Q9BYR4 195 aa6.24□□□□□ -1.41
CHPF-201ENST00000243776 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
CHPF-201ENST00000243776 DSTQ03001 7570 aaKnown RBP6.23□□□□□ -1.41
CHPF-201ENST00000243776 CRCT1Q9UGL9 99 aa6.19□□□□□ -1.42
CHPF-201ENST00000243776 MT1GP13640 62 aa6.12□□□□□ -1.43
CHPF-201ENST00000243776 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.45
CHPF-201ENST00000243776 KRTAP19-6Q3LI70 58 aa5.92□□□□□ -1.46
CHPF-201ENST00000243776 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.46
CHPF-201ENST00000243776 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.47
CHPF-201ENST00000243776 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
CHPF-201ENST00000243776 MT1MQ8N339 61 aa5.87□□□□□ -1.47
CHPF-201ENST00000243776 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
CHPF-201ENST00000243776 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
CHPF-201ENST00000243776 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
CHPF-201ENST00000243776 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
CHPF-201ENST00000243776 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
CHPF-201ENST00000243776 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
CHPF-201ENST00000243776 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
CHPF-201ENST00000243776 MDN1Q9NU22 5596 aa5.59□□□□□ -1.52
CHPF-201ENST00000243776 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
CHPF-201ENST00000243776 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
CHPF-201ENST00000243776 KRTAP9-2Q9BYQ4 174 aa5.36□□□□□ -1.55
CHPF-201ENST00000243776 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
CHPF-201ENST00000243776 LCE3DQ9BYE3 92 aa5.33□□□□□ -1.56
CHPF-201ENST00000243776 MT1AP04731 61 aa5.25□□□□□ -1.57
CHPF-201ENST00000243776 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
CHPF-201ENST00000243776 PRM1P04553 51 aa5.24□□□□□ -1.57
CHPF-201ENST00000243776 KRTAP5-5Q701N2 237 aaPredicted RBP5.21□□□□□ -1.58
CHPF-201ENST00000243776 LCE1AQ5T7P2 110 aa5.13□□□□□ -1.59
CHPF-201ENST00000243776 SPRR2EP22531 72 aa5.08□□□□□ -1.6
CHPF-201ENST00000243776 SPRR2BP35325 72 aa5.08□□□□□ -1.6
CHPF-201ENST00000243776 SPRR2AP35326 72 aa5.08□□□□□ -1.6
CHPF-201ENST00000243776 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
CHPF-201ENST00000243776 KRTAP5-9P26371 169 aa4.97□□□□□ -1.61
CHPF-201ENST00000243776 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
CHPF-201ENST00000243776 SPRR2DP22532 72 aa4.84□□□□□ -1.63
CHPF-201ENST00000243776 MT3P25713 68 aa4.7□□□□□ -1.66
CHPF-201ENST00000243776 KRTAP6-3Q3LI67 103 aa4.64□□□□□ -1.67
CHPF-201ENST00000243776 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
CHPF-201ENST00000243776 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
CHPF-201ENST00000243776 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
CHPF-201ENST00000243776 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.7
CHPF-201ENST00000243776 MT4P47944 62 aa4.4□□□□□ -1.71
CHPF-201ENST00000243776 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
CHPF-201ENST00000243776 NEBP20929 6669 aa4.28□□□□□ -1.72
CHPF-201ENST00000243776 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
CHPF-201ENST00000243776 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
CHPF-201ENST00000243776 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.74
CHPF-201ENST00000243776 LCE1DQ5T752 114 aa4.13□□□□□ -1.75
CHPF-201ENST00000243776 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
CHPF-201ENST00000243776 LCE4AQ5TA78 99 aa4.03□□□□□ -1.77
CHPF-201ENST00000243776 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
CHPF-201ENST00000243776 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
CHPF-201ENST00000243776 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
CHPF-201ENST00000243776 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
CHPF-201ENST00000243776 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
CHPF-201ENST00000243776 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
CHPF-201ENST00000243776 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
CHPF-201ENST00000243776 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
CHPF-201ENST00000243776 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
CHPF-201ENST00000243776 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
CHPF-201ENST00000243776 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
CHPF-201ENST00000243776 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
CHPF-201ENST00000243776 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
CHPF-201ENST00000243776 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
CHPF-201ENST00000243776 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
CHPF-201ENST00000243776 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
CHPF-201ENST00000243776 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
CHPF-201ENST00000243776 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.9
CHPF-201ENST00000243776 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.91
CHPF-201ENST00000243776 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
CHPF-201ENST00000243776 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
CHPF-201ENST00000243776 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
CHPF-201ENST00000243776 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
CHPF-201ENST00000243776 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
CHPF-201ENST00000243776 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
CHPF-201ENST00000243776 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms