RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 LCE1DQ5T752 114 aa2.28□□□□□ -2.04
STAG1-201ENST00000236698 SYNE1Q8NF91 8797 aaKnown RBP2.25□□□□□ -2.05
STAG1-201ENST00000236698 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
STAG1-201ENST00000236698 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
STAG1-201ENST00000236698 UBR4Q5T4S7 5183 aa2.24□□□□□ -2.05
STAG1-201ENST00000236698 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
STAG1-201ENST00000236698 MT1LQ93083 61 aa2.23□□□□□ -2.05
STAG1-201ENST00000236698 HMCN2Q8NDA2 5059 aa2.22□□□□□ -2.05
STAG1-201ENST00000236698 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
STAG1-201ENST00000236698 FAT4Q6V0I7 4981 aa2.2□□□□□ -2.06
STAG1-201ENST00000236698 KRTAP9-9Q9BYP9 154 aa2.2□□□□□ -2.06
STAG1-201ENST00000236698 MT1EP04732 61 aa2.19□□□□□ -2.06
STAG1-201ENST00000236698 TNXBP22105 4242 aa2.19□□□□□ -2.06
STAG1-201ENST00000236698 PRM1P04553 51 aa2.18□□□□□ -2.06
STAG1-201ENST00000236698 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
STAG1-201ENST00000236698 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
STAG1-201ENST00000236698 KRTAP4-8A0A0G2JLE6 195 aa2.13□□□□□ -2.07
STAG1-201ENST00000236698 KRTAP4-8Q9BYQ9 185 aa2.13□□□□□ -2.07
STAG1-201ENST00000236698 MT1MQ8N339 61 aa2.08□□□□□ -2.08
STAG1-201ENST00000236698 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
STAG1-201ENST00000236698 KRTAP2-3P0C7H8 128 aa2.05□□□□□ -2.08
STAG1-201ENST00000236698 KRTAP2-4Q9BYR9 128 aa2.05□□□□□ -2.08
STAG1-201ENST00000236698 KRTAP2-1Q9BYU5 128 aa2.05□□□□□ -2.08
STAG1-201ENST00000236698 LPAP08519 4548 aa2.05□□□□□ -2.08
STAG1-201ENST00000236698 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
STAG1-201ENST00000236698 KRTAP9-2Q9BYQ4 174 aa2□□□□□ -2.09
STAG1-201ENST00000236698 MT1AP04731 61 aa1.99□□□□□ -2.09
STAG1-201ENST00000236698 KRTAP4-7Q9BYR0 210 aa1.95□□□□□ -2.1
STAG1-201ENST00000236698 USH2AO75445 5202 aa1.94□□□□□ -2.1
STAG1-201ENST00000236698 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
STAG1-201ENST00000236698 MUC2Q02817 5179 aa1.91□□□□□ -2.1
STAG1-201ENST00000236698 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
STAG1-201ENST00000236698 MT4P47944 62 aa1.88□□□□□ -2.11
STAG1-201ENST00000236698 KRTAP5-9P26371 169 aa1.84□□□□□ -2.12
STAG1-201ENST00000236698 KRTAP4-3Q9BYR4 195 aa1.82□□□□□ -2.12
STAG1-201ENST00000236698 FSIP2Q5CZC0 6907 aa1.82□□□□□ -2.12
STAG1-201ENST00000236698 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
STAG1-201ENST00000236698 LOC100996750A0A140TA64 210 aa1.79□□□□□ -2.12
STAG1-201ENST00000236698 FCGBPQ9Y6R7 5405 aaPredicted RBP1.78□□□□□ -2.12
STAG1-201ENST00000236698 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
STAG1-201ENST00000236698 KMT2DO14686 5537 aa1.76□□□□□ -2.13
STAG1-201ENST00000236698 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
STAG1-201ENST00000236698 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
STAG1-201ENST00000236698 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.74□□□□□ -2.13
STAG1-201ENST00000236698 DSTQ03001 7570 aaKnown RBP1.71□□□□□ -2.14
STAG1-201ENST00000236698 KRTAP4-12Q9BQ66 201 aa1.7□□□□□ -2.14
STAG1-201ENST00000236698 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
STAG1-201ENST00000236698 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.15
STAG1-201ENST00000236698 KRTAP4-9Q9BYQ8 210 aa1.62□□□□□ -2.15
STAG1-201ENST00000236698 SYNE2Q8WXH0 6885 aaKnown RBP1.61□□□□□ -2.15
STAG1-201ENST00000236698 MACF1Q9UPN3 7388 aaKnown RBP1.6□□□□□ -2.15
STAG1-201ENST00000236698 KRTAP5-5Q701N2 237 aaPredicted RBP1.59□□□□□ -2.16
STAG1-201ENST00000236698 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
STAG1-201ENST00000236698 KRTAP5-4Q6L8H1 288 aa1.53□□□□□ -2.16
STAG1-201ENST00000236698 KRTAP4-11Q9BYQ6 195 aa1.52□□□□□ -2.17
STAG1-201ENST00000236698 KRTAP20-2Q3LI61 65 aa1.52□□□□□ -2.17
STAG1-201ENST00000236698 NEBP20929 6669 aa1.52□□□□□ -2.17
STAG1-201ENST00000236698 KRTAP4-6Q9BYQ5 205 aa1.43□□□□□ -2.18
STAG1-201ENST00000236698 KRTAP5-2Q701N4 177 aa1.38□□□□□ -2.19
STAG1-201ENST00000236698 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
STAG1-201ENST00000236698 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
STAG1-201ENST00000236698 KRTAP5-3Q6L8H2 238 aa1.31□□□□□ -2.2
STAG1-201ENST00000236698 MUC5ACP98088 5654 aa1.27□□□□□ -2.21
STAG1-201ENST00000236698 KRTAP5-8O75690 187 aa1.25□□□□□ -2.21
STAG1-201ENST00000236698 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
STAG1-201ENST00000236698 KRTAP4-2Q9BYR5 136 aa1.2□□□□□ -2.22
STAG1-201ENST00000236698 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.19□□□□□ -2.22
STAG1-201ENST00000236698 KRTAP5-11Q6L8G4 156 aa1.17□□□□□ -2.22
STAG1-201ENST00000236698 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
STAG1-201ENST00000236698 KRTAP4-4Q9BYR3 166 aa1.15□□□□□ -2.23
STAG1-201ENST00000236698 KRTAP5-1Q6L8H4 278 aa1.13□□□□□ -2.23
STAG1-201ENST00000236698 KRTAP5-7Q6L8G8 165 aa1.12□□□□□ -2.23
STAG1-201ENST00000236698 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
STAG1-201ENST00000236698 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
STAG1-201ENST00000236698 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
STAG1-201ENST00000236698 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
STAG1-201ENST00000236698 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 80.5 ms