RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
CTSD-201ENST00000236671 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
CTSD-201ENST00000236671 KRTAP19-7Q3SYF9 63 aa5.52□□□□□ -1.53
CTSD-201ENST00000236671 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
CTSD-201ENST00000236671 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
CTSD-201ENST00000236671 KRTAP6-3Q3LI67 103 aa5.39□□□□□ -1.55
CTSD-201ENST00000236671 MT1LQ93083 61 aa5.36□□□□□ -1.55
CTSD-201ENST00000236671 MT1EP04732 61 aa5.35□□□□□ -1.55
CTSD-201ENST00000236671 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
CTSD-201ENST00000236671 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
CTSD-201ENST00000236671 SPRR2FQ96RM1 72 aa5.35□□□□□ -1.55
CTSD-201ENST00000236671 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
CTSD-201ENST00000236671 KRTAP2-1Q9BYU5 128 aa5.35□□□□□ -1.55
CTSD-201ENST00000236671 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
CTSD-201ENST00000236671 NEBP20929 6669 aa5.24□□□□□ -1.57
CTSD-201ENST00000236671 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
CTSD-201ENST00000236671 SPRR2EP22531 72 aa5.15□□□□□ -1.58
CTSD-201ENST00000236671 SPRR2BP35325 72 aa5.15□□□□□ -1.58
CTSD-201ENST00000236671 SPRR2AP35326 72 aa5.15□□□□□ -1.58
CTSD-201ENST00000236671 LCE1AQ5T7P2 110 aa5.14□□□□□ -1.59
CTSD-201ENST00000236671 KRTAP4-3Q9BYR4 195 aa5.06□□□□□ -1.6
CTSD-201ENST00000236671 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
CTSD-201ENST00000236671 MT1GP13640 62 aa5□□□□□ -1.61
CTSD-201ENST00000236671 MT1MQ8N339 61 aa4.99□□□□□ -1.61
CTSD-201ENST00000236671 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
CTSD-201ENST00000236671 SPRR2DP22532 72 aa4.96□□□□□ -1.62
CTSD-201ENST00000236671 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
CTSD-201ENST00000236671 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
CTSD-201ENST00000236671 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
CTSD-201ENST00000236671 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
CTSD-201ENST00000236671 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
CTSD-201ENST00000236671 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
CTSD-201ENST00000236671 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
CTSD-201ENST00000236671 MT1AP04731 61 aa4.53□□□□□ -1.68
CTSD-201ENST00000236671 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
CTSD-201ENST00000236671 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
CTSD-201ENST00000236671 MT4P47944 62 aa4.4□□□□□ -1.7
CTSD-201ENST00000236671 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.7
CTSD-201ENST00000236671 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
CTSD-201ENST00000236671 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
CTSD-201ENST00000236671 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
CTSD-201ENST00000236671 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
CTSD-201ENST00000236671 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
CTSD-201ENST00000236671 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
CTSD-201ENST00000236671 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
CTSD-201ENST00000236671 PRM1P04553 51 aa4.18□□□□□ -1.74
CTSD-201ENST00000236671 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
CTSD-201ENST00000236671 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
CTSD-201ENST00000236671 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
CTSD-201ENST00000236671 MT3P25713 68 aa4.01□□□□□ -1.77
CTSD-201ENST00000236671 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
CTSD-201ENST00000236671 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
CTSD-201ENST00000236671 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.78
CTSD-201ENST00000236671 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
CTSD-201ENST00000236671 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
CTSD-201ENST00000236671 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
CTSD-201ENST00000236671 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
CTSD-201ENST00000236671 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
CTSD-201ENST00000236671 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
CTSD-201ENST00000236671 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
CTSD-201ENST00000236671 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
CTSD-201ENST00000236671 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
CTSD-201ENST00000236671 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
CTSD-201ENST00000236671 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
CTSD-201ENST00000236671 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
CTSD-201ENST00000236671 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
CTSD-201ENST00000236671 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
CTSD-201ENST00000236671 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
CTSD-201ENST00000236671 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
CTSD-201ENST00000236671 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
CTSD-201ENST00000236671 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
CTSD-201ENST00000236671 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
CTSD-201ENST00000236671 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
CTSD-201ENST00000236671 LCE1FQ5T754 118 aa2.54□□□□□ -2
CTSD-201ENST00000236671 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
CTSD-201ENST00000236671 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
CTSD-201ENST00000236671 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 59.1 ms