RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 MT1EP04732 61 aa5.62□□□□□ -1.51
SLC1A4-201ENST00000234256 LCE2AQ5TA79 106 aaPredicted RBP5.62□□□□□ -1.51
SLC1A4-201ENST00000234256 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
SLC1A4-201ENST00000234256 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
SLC1A4-201ENST00000234256 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
SLC1A4-201ENST00000234256 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
SLC1A4-201ENST00000234256 LCE3DQ9BYE3 92 aa5.51□□□□□ -1.53
SLC1A4-201ENST00000234256 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
SLC1A4-201ENST00000234256 SPRR2DP22532 72 aa5.49□□□□□ -1.53
SLC1A4-201ENST00000234256 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
SLC1A4-201ENST00000234256 LCE3EQ5T5B0 92 aa5.4□□□□□ -1.54
SLC1A4-201ENST00000234256 MT1MQ8N339 61 aa5.4□□□□□ -1.54
SLC1A4-201ENST00000234256 KRTAP19-6Q3LI70 58 aa5.37□□□□□ -1.55
SLC1A4-201ENST00000234256 KMT2DO14686 5537 aa5.35□□□□□ -1.55
SLC1A4-201ENST00000234256 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
SLC1A4-201ENST00000234256 LCE2DQ5TA82 110 aaPredicted RBP5.26□□□□□ -1.57
SLC1A4-201ENST00000234256 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.58
SLC1A4-201ENST00000234256 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
SLC1A4-201ENST00000234256 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
SLC1A4-201ENST00000234256 PRM1P04553 51 aa5.07□□□□□ -1.6
SLC1A4-201ENST00000234256 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
SLC1A4-201ENST00000234256 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
SLC1A4-201ENST00000234256 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
SLC1A4-201ENST00000234256 MT3P25713 68 aa5.04□□□□□ -1.6
SLC1A4-201ENST00000234256 MT4P47944 62 aa5.04□□□□□ -1.6
SLC1A4-201ENST00000234256 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
SLC1A4-201ENST00000234256 MUC12Q9UKN1 5478 aa5.02□□□□□ -1.61
SLC1A4-201ENST00000234256 MT1AP04731 61 aa4.92□□□□□ -1.62
SLC1A4-201ENST00000234256 SSPOA2VEC9 5147 aa4.9□□□□□ -1.62
SLC1A4-201ENST00000234256 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
SLC1A4-201ENST00000234256 LCE1BQ5T7P3 118 aa4.83□□□□□ -1.64
SLC1A4-201ENST00000234256 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
SLC1A4-201ENST00000234256 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
SLC1A4-201ENST00000234256 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
SLC1A4-201ENST00000234256 MUC19Q7Z5P9 8384 aa4.69□□□□□ -1.66
SLC1A4-201ENST00000234256 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
SLC1A4-201ENST00000234256 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
SLC1A4-201ENST00000234256 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
SLC1A4-201ENST00000234256 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
SLC1A4-201ENST00000234256 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
SLC1A4-201ENST00000234256 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
SLC1A4-201ENST00000234256 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
SLC1A4-201ENST00000234256 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
SLC1A4-201ENST00000234256 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
SLC1A4-201ENST00000234256 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
SLC1A4-201ENST00000234256 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
SLC1A4-201ENST00000234256 NEBP20929 6669 aa4.07□□□□□ -1.76
SLC1A4-201ENST00000234256 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
SLC1A4-201ENST00000234256 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
SLC1A4-201ENST00000234256 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
SLC1A4-201ENST00000234256 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
SLC1A4-201ENST00000234256 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
SLC1A4-201ENST00000234256 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
SLC1A4-201ENST00000234256 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
SLC1A4-201ENST00000234256 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
SLC1A4-201ENST00000234256 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
SLC1A4-201ENST00000234256 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
SLC1A4-201ENST00000234256 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
SLC1A4-201ENST00000234256 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
SLC1A4-201ENST00000234256 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
SLC1A4-201ENST00000234256 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
SLC1A4-201ENST00000234256 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
SLC1A4-201ENST00000234256 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
SLC1A4-201ENST00000234256 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
SLC1A4-201ENST00000234256 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
SLC1A4-201ENST00000234256 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
SLC1A4-201ENST00000234256 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
SLC1A4-201ENST00000234256 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
SLC1A4-201ENST00000234256 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
SLC1A4-201ENST00000234256 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
SLC1A4-201ENST00000234256 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
SLC1A4-201ENST00000234256 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
SLC1A4-201ENST00000234256 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
SLC1A4-201ENST00000234256 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
SLC1A4-201ENST00000234256 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
SLC1A4-201ENST00000234256 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
SLC1A4-201ENST00000234256 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 9.5 ms