RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 SPRR2DP22532 72 aa7.23□□□□□ -1.25
CENPA-201ENST00000233505 KRTAP19-7Q3SYF9 63 aa7.23□□□□□ -1.25
CENPA-201ENST00000233505 MT1EP04732 61 aa7.15□□□□□ -1.26
CENPA-201ENST00000233505 KRTAP2-2Q9BYT5 123 aa7.15□□□□□ -1.26
CENPA-201ENST00000233505 KRTAP2-1Q9BYU5 128 aa7.15□□□□□ -1.26
CENPA-201ENST00000233505 LCE3AQ5TA76 89 aa7.13□□□□□ -1.27
CENPA-201ENST00000233505 KRTAP4-9Q9BYQ8 210 aa7.13□□□□□ -1.27
CENPA-201ENST00000233505 KRTAP25-1Q3LHN0 102 aa7.11□□□□□ -1.27
CENPA-201ENST00000233505 KRTAP19-5Q3LI72 72 aa7.11□□□□□ -1.27
CENPA-201ENST00000233505 CDC42SE1Q9NRR8 79 aa7.11□□□□□ -1.27
CENPA-201ENST00000233505 KRTAP19-3Q7Z4W3 81 aa7.02□□□□□ -1.29
CENPA-201ENST00000233505 LCE5AQ5TCM9 118 aa6.99□□□□□ -1.29
CENPA-201ENST00000233505 H3BS24 57 aa6.98□□□□□ -1.29
CENPA-201ENST00000233505 KRTAP4-2Q9BYR5 136 aa6.98□□□□□ -1.29
CENPA-201ENST00000233505 LCE4AQ5TA78 99 aa6.97□□□□□ -1.29
CENPA-201ENST00000233505 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
CENPA-201ENST00000233505 MT1GP13640 62 aa6.9□□□□□ -1.3
CENPA-201ENST00000233505 ROMO1P60602 79 aa6.89□□□□□ -1.31
CENPA-201ENST00000233505 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
CENPA-201ENST00000233505 MT1LQ93083 61 aa6.89□□□□□ -1.31
CENPA-201ENST00000233505 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
CENPA-201ENST00000233505 KRTAP4-11Q9BYQ6 195 aa6.87□□□□□ -1.31
CENPA-201ENST00000233505 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
CENPA-201ENST00000233505 DSTQ03001 7570 aaKnown RBP6.82□□□□□ -1.32
CENPA-201ENST00000233505 BRK1Q8WUW1 75 aa6.79□□□□□ -1.32
CENPA-201ENST00000233505 MT1MQ8N339 61 aa6.77□□□□□ -1.33
CENPA-201ENST00000233505 PRO0628Q9UI54 55 aa6.6□□□□□ -1.35
CENPA-201ENST00000233505 KRTAP15-1Q3LI76 137 aa6.56□□□□□ -1.36
CENPA-201ENST00000233505 KRTAP4-3Q9BYR4 195 aa6.53□□□□□ -1.36
CENPA-201ENST00000233505 GPR98Q8WXG9 6306 aa6.52□□□□□ -1.37
CENPA-201ENST00000233505 PMAIP1Q13794 54 aa6.44□□□□□ -1.38
CENPA-201ENST00000233505 HMCN1Q96RW7 5635 aa6.38□□□□□ -1.39
CENPA-201ENST00000233505 LCE3CQ5T5A8 94 aa6.37□□□□□ -1.39
CENPA-201ENST00000233505 MT4P47944 62 aa6.36□□□□□ -1.39
CENPA-201ENST00000233505 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
CENPA-201ENST00000233505 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
CENPA-201ENST00000233505 KRTAP5-5Q701N2 237 aaPredicted RBP6.21□□□□□ -1.42
CENPA-201ENST00000233505 AHNAK2Q8IVF2 5795 aa6.18□□□□□ -1.42
CENPA-201ENST00000233505 KTN1-AS1Q86SY8 53 aa6.13□□□□□ -1.43
CENPA-201ENST00000233505 PRAC1Q96KF2 57 aa5.99□□□□□ -1.45
CENPA-201ENST00000233505 KRTAP9-6A8MVA2 160 aa5.98□□□□□ -1.45
CENPA-201ENST00000233505 KRTAP5-10Q6L8G5 202 aa5.97□□□□□ -1.45
CENPA-201ENST00000233505 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
CENPA-201ENST00000233505 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
CENPA-201ENST00000233505 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
CENPA-201ENST00000233505 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
CENPA-201ENST00000233505 MT1AP04731 61 aa5.88□□□□□ -1.47
CENPA-201ENST00000233505 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
CENPA-201ENST00000233505 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
CENPA-201ENST00000233505 KRTAP5-7Q6L8G8 165 aa5.73□□□□□ -1.49
CENPA-201ENST00000233505 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
CENPA-201ENST00000233505 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
CENPA-201ENST00000233505 MT3P25713 68 aa5.36□□□□□ -1.55
CENPA-201ENST00000233505 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
CENPA-201ENST00000233505 KRTAP5-8O75690 187 aa5.22□□□□□ -1.57
CENPA-201ENST00000233505 MUC5BQ9HC84 5762 aaPredicted RBP5.11□□□□□ -1.59
CENPA-201ENST00000233505 AHNAKQ09666 5890 aaKnown RBP5.1□□□□□ -1.59
CENPA-201ENST00000233505 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
CENPA-201ENST00000233505 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
CENPA-201ENST00000233505 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
CENPA-201ENST00000233505 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
CENPA-201ENST00000233505 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
CENPA-201ENST00000233505 NDUFAF8A1L188 74 aa4.69□□□□□ -1.66
CENPA-201ENST00000233505 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
CENPA-201ENST00000233505 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
CENPA-201ENST00000233505 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
CENPA-201ENST00000233505 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
CENPA-201ENST00000233505 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
CENPA-201ENST00000233505 INE1O15225 51 aa3.94□□□□□ -1.78
CENPA-201ENST00000233505 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
CENPA-201ENST00000233505 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
CENPA-201ENST00000233505 KRTAP21-2Q3LI59 83 aa3.83□□□□□ -1.8
CENPA-201ENST00000233505 PRM1P04553 51 aa3.52□□□□□ -1.85
CENPA-201ENST00000233505 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
CENPA-201ENST00000233505 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
CENPA-201ENST00000233505 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
CENPA-201ENST00000233505 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 66.6 ms