RNA–Protein interactions for RNA: ENST00000232165.7

UBE3A-201, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-201ENST00000232165 MT3P25713 68 aa5.44□□□□□ -1.54
UBE3A-201ENST00000232165 KRTAP19-7Q3SYF9 63 aa5.43□□□□□ -1.54
UBE3A-201ENST00000232165 KRTAP9-2Q9BYQ4 174 aa5.43□□□□□ -1.54
UBE3A-201ENST00000232165 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
UBE3A-201ENST00000232165 FAT4Q6V0I7 4981 aa5.41□□□□□ -1.54
UBE3A-201ENST00000232165 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
UBE3A-201ENST00000232165 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
UBE3A-201ENST00000232165 HMCN2Q8NDA2 5059 aa5.3□□□□□ -1.56
UBE3A-201ENST00000232165 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
UBE3A-201ENST00000232165 UBR4Q5T4S7 5183 aa5.26□□□□□ -1.57
UBE3A-201ENST00000232165 MT1AP04731 61 aa5.26□□□□□ -1.57
UBE3A-201ENST00000232165 PRM1P04553 51 aa5.23□□□□□ -1.57
UBE3A-201ENST00000232165 MT4P47944 62 aa5.22□□□□□ -1.57
UBE3A-201ENST00000232165 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
UBE3A-201ENST00000232165 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
UBE3A-201ENST00000232165 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
UBE3A-201ENST00000232165 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
UBE3A-201ENST00000232165 KRTAP9-6A0A140TA67 174 aa5.09□□□□□ -1.59
UBE3A-201ENST00000232165 FSIP2Q5CZC0 6907 aa4.99□□□□□ -1.61
UBE3A-201ENST00000232165 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
UBE3A-201ENST00000232165 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
UBE3A-201ENST00000232165 LCE1BQ5T7P3 118 aa4.97□□□□□ -1.61
UBE3A-201ENST00000232165 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
UBE3A-201ENST00000232165 MUC2Q02817 5179 aa4.94□□□□□ -1.62
UBE3A-201ENST00000232165 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
UBE3A-201ENST00000232165 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
UBE3A-201ENST00000232165 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
UBE3A-201ENST00000232165 KRTAP20-1Q3LI63 56 aa4.84□□□□□ -1.63
UBE3A-201ENST00000232165 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
UBE3A-201ENST00000232165 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
UBE3A-201ENST00000232165 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
UBE3A-201ENST00000232165 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
UBE3A-201ENST00000232165 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
UBE3A-201ENST00000232165 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
UBE3A-201ENST00000232165 SYNE2Q8WXH0 6885 aaKnown RBP4.71□□□□□ -1.66
UBE3A-201ENST00000232165 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
UBE3A-201ENST00000232165 USH2AO75445 5202 aa4.53□□□□□ -1.68
UBE3A-201ENST00000232165 KRTAP5-9P26371 169 aa4.37□□□□□ -1.71
UBE3A-201ENST00000232165 FCGBPQ9Y6R7 5405 aaPredicted RBP4.33□□□□□ -1.72
UBE3A-201ENST00000232165 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
UBE3A-201ENST00000232165 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
UBE3A-201ENST00000232165 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
UBE3A-201ENST00000232165 SSPOA2VEC9 5147 aa4.14□□□□□ -1.75
UBE3A-201ENST00000232165 KMT2DO14686 5537 aa4.12□□□□□ -1.75
UBE3A-201ENST00000232165 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
UBE3A-201ENST00000232165 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
UBE3A-201ENST00000232165 NEBP20929 6669 aa4.08□□□□□ -1.76
UBE3A-201ENST00000232165 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
UBE3A-201ENST00000232165 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
UBE3A-201ENST00000232165 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
UBE3A-201ENST00000232165 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
UBE3A-201ENST00000232165 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
UBE3A-201ENST00000232165 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
UBE3A-201ENST00000232165 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
UBE3A-201ENST00000232165 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
UBE3A-201ENST00000232165 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
UBE3A-201ENST00000232165 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
UBE3A-201ENST00000232165 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
UBE3A-201ENST00000232165 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.86
UBE3A-201ENST00000232165 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.86
UBE3A-201ENST00000232165 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
UBE3A-201ENST00000232165 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
UBE3A-201ENST00000232165 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
UBE3A-201ENST00000232165 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
UBE3A-201ENST00000232165 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
UBE3A-201ENST00000232165 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
UBE3A-201ENST00000232165 KRTAP5-8O75690 187 aa2.96□□□□□ -1.93
UBE3A-201ENST00000232165 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
UBE3A-201ENST00000232165 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
UBE3A-201ENST00000232165 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.98
UBE3A-201ENST00000232165 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
UBE3A-201ENST00000232165 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
UBE3A-201ENST00000232165 PHGR1C9JFL3 82 aa2.53□□□□□ -2
UBE3A-201ENST00000232165 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
UBE3A-201ENST00000232165 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
UBE3A-201ENST00000232165 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
UBE3A-201ENST00000232165 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms