RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 KMT2DO14686 5537 aa6.21□□□□□ -1.42
GAPDH-201ENST00000229239 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
GAPDH-201ENST00000229239 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
GAPDH-201ENST00000229239 MDN1Q9NU22 5596 aa6.16□□□□□ -1.42
GAPDH-201ENST00000229239 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
GAPDH-201ENST00000229239 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
GAPDH-201ENST00000229239 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
GAPDH-201ENST00000229239 KRTAP20-1Q3LI63 56 aa6.07□□□□□ -1.44
GAPDH-201ENST00000229239 MT1EP04732 61 aa5.98□□□□□ -1.45
GAPDH-201ENST00000229239 SPRR2EP22531 72 aa5.96□□□□□ -1.46
GAPDH-201ENST00000229239 SPRR2BP35325 72 aa5.96□□□□□ -1.46
GAPDH-201ENST00000229239 SPRR2AP35326 72 aa5.96□□□□□ -1.46
GAPDH-201ENST00000229239 MT1LQ93083 61 aa5.92□□□□□ -1.46
GAPDH-201ENST00000229239 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
GAPDH-201ENST00000229239 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
GAPDH-201ENST00000229239 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
GAPDH-201ENST00000229239 SPRR2DP22532 72 aa5.76□□□□□ -1.49
GAPDH-201ENST00000229239 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
GAPDH-201ENST00000229239 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
GAPDH-201ENST00000229239 KRTAP2-2Q9BYT5 123 aa5.72□□□□□ -1.49
GAPDH-201ENST00000229239 KRTAP2-1Q9BYU5 128 aa5.72□□□□□ -1.49
GAPDH-201ENST00000229239 INE1O15225 51 aa5.71□□□□□ -1.5
GAPDH-201ENST00000229239 MT1GP13640 62 aa5.68□□□□□ -1.5
GAPDH-201ENST00000229239 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
GAPDH-201ENST00000229239 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
GAPDH-201ENST00000229239 MT1MQ8N339 61 aa5.6□□□□□ -1.51
GAPDH-201ENST00000229239 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
GAPDH-201ENST00000229239 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
GAPDH-201ENST00000229239 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
GAPDH-201ENST00000229239 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
GAPDH-201ENST00000229239 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
GAPDH-201ENST00000229239 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
GAPDH-201ENST00000229239 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
GAPDH-201ENST00000229239 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
GAPDH-201ENST00000229239 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
GAPDH-201ENST00000229239 MT1AP04731 61 aa5.05□□□□□ -1.6
GAPDH-201ENST00000229239 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
GAPDH-201ENST00000229239 MT4P47944 62 aa5.03□□□□□ -1.6
GAPDH-201ENST00000229239 KRTAP5-5Q701N2 237 aaPredicted RBP5.01□□□□□ -1.61
GAPDH-201ENST00000229239 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.61
GAPDH-201ENST00000229239 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
GAPDH-201ENST00000229239 AHNAK2Q8IVF2 5795 aa4.91□□□□□ -1.62
GAPDH-201ENST00000229239 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
GAPDH-201ENST00000229239 KRTAP5-10Q6L8G5 202 aa4.78□□□□□ -1.64
GAPDH-201ENST00000229239 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
GAPDH-201ENST00000229239 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
GAPDH-201ENST00000229239 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
GAPDH-201ENST00000229239 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
GAPDH-201ENST00000229239 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
GAPDH-201ENST00000229239 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
GAPDH-201ENST00000229239 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
GAPDH-201ENST00000229239 MT3P25713 68 aa4.57□□□□□ -1.68
GAPDH-201ENST00000229239 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
GAPDH-201ENST00000229239 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
GAPDH-201ENST00000229239 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
GAPDH-201ENST00000229239 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
GAPDH-201ENST00000229239 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
GAPDH-201ENST00000229239 PRM1P04553 51 aa4.18□□□□□ -1.74
GAPDH-201ENST00000229239 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
GAPDH-201ENST00000229239 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
GAPDH-201ENST00000229239 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
GAPDH-201ENST00000229239 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
GAPDH-201ENST00000229239 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
GAPDH-201ENST00000229239 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
GAPDH-201ENST00000229239 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
GAPDH-201ENST00000229239 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
GAPDH-201ENST00000229239 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
GAPDH-201ENST00000229239 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
GAPDH-201ENST00000229239 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
GAPDH-201ENST00000229239 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
GAPDH-201ENST00000229239 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
GAPDH-201ENST00000229239 LCE1FQ5T754 118 aa3.09□□□□□ -1.92
GAPDH-201ENST00000229239 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
GAPDH-201ENST00000229239 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
GAPDH-201ENST00000229239 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
GAPDH-201ENST00000229239 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
GAPDH-201ENST00000229239 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 30.5 ms