RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
LTBR-201ENST00000228918 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
LTBR-201ENST00000228918 KRTAP2-1Q9BYU5 128 aa5.58□□□□□ -1.52
LTBR-201ENST00000228918 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
LTBR-201ENST00000228918 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
LTBR-201ENST00000228918 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
LTBR-201ENST00000228918 KRTAP4-3Q9BYR4 195 aa5.31□□□□□ -1.56
LTBR-201ENST00000228918 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
LTBR-201ENST00000228918 MT1MQ8N339 61 aa5.27□□□□□ -1.57
LTBR-201ENST00000228918 KRTAP19-3Q7Z4W3 81 aa5.27□□□□□ -1.57
LTBR-201ENST00000228918 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.26□□□□□ -1.57
LTBR-201ENST00000228918 SYNE2Q8WXH0 6885 aaKnown RBP5.26□□□□□ -1.57
LTBR-201ENST00000228918 MT1GP13640 62 aa5.25□□□□□ -1.57
LTBR-201ENST00000228918 MUC12Q9UKN1 5478 aa5.22□□□□□ -1.57
LTBR-201ENST00000228918 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
LTBR-201ENST00000228918 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
LTBR-201ENST00000228918 SPRR2FQ96RM1 72 aa5.04□□□□□ -1.6
LTBR-201ENST00000228918 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
LTBR-201ENST00000228918 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
LTBR-201ENST00000228918 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
LTBR-201ENST00000228918 KRTAP5-9P26371 169 aa4.93□□□□□ -1.62
LTBR-201ENST00000228918 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
LTBR-201ENST00000228918 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
LTBR-201ENST00000228918 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
LTBR-201ENST00000228918 SPRR2EP22531 72 aa4.76□□□□□ -1.65
LTBR-201ENST00000228918 SPRR2BP35325 72 aa4.76□□□□□ -1.65
LTBR-201ENST00000228918 SPRR2AP35326 72 aa4.76□□□□□ -1.65
LTBR-201ENST00000228918 NEBP20929 6669 aa4.76□□□□□ -1.65
LTBR-201ENST00000228918 MT1AP04731 61 aa4.75□□□□□ -1.65
LTBR-201ENST00000228918 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
LTBR-201ENST00000228918 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
LTBR-201ENST00000228918 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
LTBR-201ENST00000228918 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
LTBR-201ENST00000228918 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
LTBR-201ENST00000228918 SPRR2DP22532 72 aa4.58□□□□□ -1.68
LTBR-201ENST00000228918 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
LTBR-201ENST00000228918 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
LTBR-201ENST00000228918 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
LTBR-201ENST00000228918 PRM1P04553 51 aa4.43□□□□□ -1.7
LTBR-201ENST00000228918 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
LTBR-201ENST00000228918 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
LTBR-201ENST00000228918 MT3P25713 68 aa4.25□□□□□ -1.73
LTBR-201ENST00000228918 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
LTBR-201ENST00000228918 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
LTBR-201ENST00000228918 MT4P47944 62 aa4.02□□□□□ -1.77
LTBR-201ENST00000228918 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
LTBR-201ENST00000228918 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
LTBR-201ENST00000228918 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
LTBR-201ENST00000228918 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
LTBR-201ENST00000228918 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
LTBR-201ENST00000228918 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
LTBR-201ENST00000228918 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
LTBR-201ENST00000228918 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
LTBR-201ENST00000228918 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.83
LTBR-201ENST00000228918 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
LTBR-201ENST00000228918 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
LTBR-201ENST00000228918 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
LTBR-201ENST00000228918 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
LTBR-201ENST00000228918 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
LTBR-201ENST00000228918 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
LTBR-201ENST00000228918 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
LTBR-201ENST00000228918 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
LTBR-201ENST00000228918 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
LTBR-201ENST00000228918 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
LTBR-201ENST00000228918 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
LTBR-201ENST00000228918 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
LTBR-201ENST00000228918 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
LTBR-201ENST00000228918 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
LTBR-201ENST00000228918 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
LTBR-201ENST00000228918 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
LTBR-201ENST00000228918 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
LTBR-201ENST00000228918 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.96
LTBR-201ENST00000228918 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
LTBR-201ENST00000228918 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
LTBR-201ENST00000228918 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
LTBR-201ENST00000228918 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
LTBR-201ENST00000228918 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms