RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
CDKN1B-201ENST00000228872 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
CDKN1B-201ENST00000228872 MT1LQ93083 61 aa5.92□□□□□ -1.46
CDKN1B-201ENST00000228872 MT1EP04732 61 aa5.86□□□□□ -1.47
CDKN1B-201ENST00000228872 MACF1Q9UPN3 7388 aaKnown RBP5.8□□□□□ -1.48
CDKN1B-201ENST00000228872 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
CDKN1B-201ENST00000228872 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
CDKN1B-201ENST00000228872 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
CDKN1B-201ENST00000228872 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
CDKN1B-201ENST00000228872 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
CDKN1B-201ENST00000228872 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
CDKN1B-201ENST00000228872 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
CDKN1B-201ENST00000228872 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
CDKN1B-201ENST00000228872 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
CDKN1B-201ENST00000228872 MT1GP13640 62 aa5.57□□□□□ -1.52
CDKN1B-201ENST00000228872 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
CDKN1B-201ENST00000228872 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
CDKN1B-201ENST00000228872 MT1MQ8N339 61 aa5.51□□□□□ -1.53
CDKN1B-201ENST00000228872 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
CDKN1B-201ENST00000228872 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
CDKN1B-201ENST00000228872 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
CDKN1B-201ENST00000228872 SPRR2EP22531 72 aa5.36□□□□□ -1.55
CDKN1B-201ENST00000228872 SPRR2BP35325 72 aa5.36□□□□□ -1.55
CDKN1B-201ENST00000228872 SPRR2AP35326 72 aa5.36□□□□□ -1.55
CDKN1B-201ENST00000228872 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
CDKN1B-201ENST00000228872 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
CDKN1B-201ENST00000228872 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
CDKN1B-201ENST00000228872 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
CDKN1B-201ENST00000228872 MT1AP04731 61 aa5.2□□□□□ -1.58
CDKN1B-201ENST00000228872 SPRR2DP22532 72 aa5.17□□□□□ -1.58
CDKN1B-201ENST00000228872 NEBP20929 6669 aa5.1□□□□□ -1.59
CDKN1B-201ENST00000228872 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
CDKN1B-201ENST00000228872 LCE3DQ9BYE3 92 aa5.09□□□□□ -1.59
CDKN1B-201ENST00000228872 PRM1P04553 51 aa5.09□□□□□ -1.6
CDKN1B-201ENST00000228872 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
CDKN1B-201ENST00000228872 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
CDKN1B-201ENST00000228872 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
CDKN1B-201ENST00000228872 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
CDKN1B-201ENST00000228872 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
CDKN1B-201ENST00000228872 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
CDKN1B-201ENST00000228872 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
CDKN1B-201ENST00000228872 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
CDKN1B-201ENST00000228872 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
CDKN1B-201ENST00000228872 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
CDKN1B-201ENST00000228872 MT4P47944 62 aa4.47□□□□□ -1.69
CDKN1B-201ENST00000228872 MT3P25713 68 aa4.42□□□□□ -1.7
CDKN1B-201ENST00000228872 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
CDKN1B-201ENST00000228872 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
CDKN1B-201ENST00000228872 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
CDKN1B-201ENST00000228872 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
CDKN1B-201ENST00000228872 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
CDKN1B-201ENST00000228872 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
CDKN1B-201ENST00000228872 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
CDKN1B-201ENST00000228872 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
CDKN1B-201ENST00000228872 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.8
CDKN1B-201ENST00000228872 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
CDKN1B-201ENST00000228872 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
CDKN1B-201ENST00000228872 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
CDKN1B-201ENST00000228872 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
CDKN1B-201ENST00000228872 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
CDKN1B-201ENST00000228872 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
CDKN1B-201ENST00000228872 LCE1FQ5T754 118 aa3.65□□□□□ -1.82
CDKN1B-201ENST00000228872 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
CDKN1B-201ENST00000228872 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
CDKN1B-201ENST00000228872 KRTAP5-7Q6L8G8 165 aa3.58□□□□□ -1.84
CDKN1B-201ENST00000228872 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
CDKN1B-201ENST00000228872 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CDKN1B-201ENST00000228872 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
CDKN1B-201ENST00000228872 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
CDKN1B-201ENST00000228872 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
CDKN1B-201ENST00000228872 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
CDKN1B-201ENST00000228872 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
CDKN1B-201ENST00000228872 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
CDKN1B-201ENST00000228872 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
CDKN1B-201ENST00000228872 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
CDKN1B-201ENST00000228872 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
CDKN1B-201ENST00000228872 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms