RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 TNP1P09430 55 aa4.44□□□□□ -1.7
CTSC-201ENST00000227266 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.7
CTSC-201ENST00000227266 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
CTSC-201ENST00000227266 KMT2DO14686 5537 aa4.39□□□□□ -1.71
CTSC-201ENST00000227266 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
CTSC-201ENST00000227266 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
CTSC-201ENST00000227266 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
CTSC-201ENST00000227266 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
CTSC-201ENST00000227266 INE1O15225 51 aa4.2□□□□□ -1.74
CTSC-201ENST00000227266 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
CTSC-201ENST00000227266 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
CTSC-201ENST00000227266 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
CTSC-201ENST00000227266 KRTAP19-5Q3LI72 72 aa4.16□□□□□ -1.74
CTSC-201ENST00000227266 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
CTSC-201ENST00000227266 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
CTSC-201ENST00000227266 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
CTSC-201ENST00000227266 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
CTSC-201ENST00000227266 MT1EP04732 61 aa4.09□□□□□ -1.76
CTSC-201ENST00000227266 NEBP20929 6669 aa4.05□□□□□ -1.76
CTSC-201ENST00000227266 SPRR2EP22531 72 aa4.02□□□□□ -1.77
CTSC-201ENST00000227266 SPRR2BP35325 72 aa4.02□□□□□ -1.77
CTSC-201ENST00000227266 SPRR2AP35326 72 aa4.02□□□□□ -1.77
CTSC-201ENST00000227266 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
CTSC-201ENST00000227266 KRTAP19-3Q7Z4W3 81 aa3.97□□□□□ -1.77
CTSC-201ENST00000227266 MT1LQ93083 61 aa3.97□□□□□ -1.77
CTSC-201ENST00000227266 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
CTSC-201ENST00000227266 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
CTSC-201ENST00000227266 MT1GP13640 62 aa3.91□□□□□ -1.78
CTSC-201ENST00000227266 SPRR2DP22532 72 aa3.88□□□□□ -1.79
CTSC-201ENST00000227266 MT1MQ8N339 61 aa3.86□□□□□ -1.79
CTSC-201ENST00000227266 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
CTSC-201ENST00000227266 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
CTSC-201ENST00000227266 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
CTSC-201ENST00000227266 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
CTSC-201ENST00000227266 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
CTSC-201ENST00000227266 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
CTSC-201ENST00000227266 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
CTSC-201ENST00000227266 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
CTSC-201ENST00000227266 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
CTSC-201ENST00000227266 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
CTSC-201ENST00000227266 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
CTSC-201ENST00000227266 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
CTSC-201ENST00000227266 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
CTSC-201ENST00000227266 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
CTSC-201ENST00000227266 MT4P47944 62 aa3.38□□□□□ -1.87
CTSC-201ENST00000227266 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
CTSC-201ENST00000227266 MT1AP04731 61 aa3.37□□□□□ -1.87
CTSC-201ENST00000227266 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
CTSC-201ENST00000227266 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
CTSC-201ENST00000227266 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
CTSC-201ENST00000227266 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
CTSC-201ENST00000227266 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
CTSC-201ENST00000227266 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
CTSC-201ENST00000227266 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
CTSC-201ENST00000227266 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
CTSC-201ENST00000227266 MT3P25713 68 aa3.07□□□□□ -1.92
CTSC-201ENST00000227266 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
CTSC-201ENST00000227266 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
CTSC-201ENST00000227266 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
CTSC-201ENST00000227266 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
CTSC-201ENST00000227266 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
CTSC-201ENST00000227266 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
CTSC-201ENST00000227266 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
CTSC-201ENST00000227266 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
CTSC-201ENST00000227266 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
CTSC-201ENST00000227266 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
CTSC-201ENST00000227266 PRM1P04553 51 aa2.67□□□□□ -1.98
CTSC-201ENST00000227266 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
CTSC-201ENST00000227266 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
CTSC-201ENST00000227266 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
CTSC-201ENST00000227266 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
CTSC-201ENST00000227266 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
CTSC-201ENST00000227266 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
CTSC-201ENST00000227266 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
CTSC-201ENST00000227266 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
CTSC-201ENST00000227266 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CTSC-201ENST00000227266 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 76.2 ms