RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 MT1MQ8N339 61 aa5.09□□□□□ -1.59
HDAC5-201ENST00000225983 RNF213Q63HN8 5207 aa5.08□□□□□ -1.6
HDAC5-201ENST00000225983 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
HDAC5-201ENST00000225983 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
HDAC5-201ENST00000225983 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
HDAC5-201ENST00000225983 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
HDAC5-201ENST00000225983 LCE2DQ5TA82 110 aaPredicted RBP4.91□□□□□ -1.62
HDAC5-201ENST00000225983 LCE2AQ5TA79 106 aaPredicted RBP4.91□□□□□ -1.62
HDAC5-201ENST00000225983 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.63
HDAC5-201ENST00000225983 MT3P25713 68 aa4.84□□□□□ -1.63
HDAC5-201ENST00000225983 MT4P47944 62 aa4.84□□□□□ -1.63
HDAC5-201ENST00000225983 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
HDAC5-201ENST00000225983 PRM1P04553 51 aa4.83□□□□□ -1.64
HDAC5-201ENST00000225983 MUC2Q02817 5179 aa4.82□□□□□ -1.64
HDAC5-201ENST00000225983 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
HDAC5-201ENST00000225983 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
HDAC5-201ENST00000225983 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
HDAC5-201ENST00000225983 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
HDAC5-201ENST00000225983 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
HDAC5-201ENST00000225983 MT1AP04731 61 aa4.68□□□□□ -1.66
HDAC5-201ENST00000225983 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
HDAC5-201ENST00000225983 LCE1BQ5T7P3 118 aa4.63□□□□□ -1.67
HDAC5-201ENST00000225983 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
HDAC5-201ENST00000225983 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
HDAC5-201ENST00000225983 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
HDAC5-201ENST00000225983 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
HDAC5-201ENST00000225983 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
HDAC5-201ENST00000225983 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
HDAC5-201ENST00000225983 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
HDAC5-201ENST00000225983 USH2AO75445 5202 aa4.36□□□□□ -1.71
HDAC5-201ENST00000225983 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
HDAC5-201ENST00000225983 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
HDAC5-201ENST00000225983 KMT2DO14686 5537 aa4.31□□□□□ -1.72
HDAC5-201ENST00000225983 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
HDAC5-201ENST00000225983 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
HDAC5-201ENST00000225983 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
HDAC5-201ENST00000225983 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.73
HDAC5-201ENST00000225983 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.2□□□□□ -1.74
HDAC5-201ENST00000225983 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
HDAC5-201ENST00000225983 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
HDAC5-201ENST00000225983 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
HDAC5-201ENST00000225983 SSPOA2VEC9 5147 aa3.97□□□□□ -1.77
HDAC5-201ENST00000225983 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
HDAC5-201ENST00000225983 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
HDAC5-201ENST00000225983 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
HDAC5-201ENST00000225983 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
HDAC5-201ENST00000225983 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
HDAC5-201ENST00000225983 NEBP20929 6669 aa3.76□□□□□ -1.81
HDAC5-201ENST00000225983 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
HDAC5-201ENST00000225983 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
HDAC5-201ENST00000225983 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
HDAC5-201ENST00000225983 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
HDAC5-201ENST00000225983 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
HDAC5-201ENST00000225983 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
HDAC5-201ENST00000225983 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
HDAC5-201ENST00000225983 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
HDAC5-201ENST00000225983 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
HDAC5-201ENST00000225983 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
HDAC5-201ENST00000225983 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
HDAC5-201ENST00000225983 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
HDAC5-201ENST00000225983 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
HDAC5-201ENST00000225983 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
HDAC5-201ENST00000225983 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
HDAC5-201ENST00000225983 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
HDAC5-201ENST00000225983 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
HDAC5-201ENST00000225983 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
HDAC5-201ENST00000225983 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
HDAC5-201ENST00000225983 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
HDAC5-201ENST00000225983 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
HDAC5-201ENST00000225983 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
HDAC5-201ENST00000225983 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
HDAC5-201ENST00000225983 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
HDAC5-201ENST00000225983 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
HDAC5-201ENST00000225983 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
HDAC5-201ENST00000225983 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
HDAC5-201ENST00000225983 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
HDAC5-201ENST00000225983 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 8 ms