RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
NOD1-201ENST00000222823 FSIP2Q5CZC0 6907 aa3.89□□□□□ -1.79
NOD1-201ENST00000222823 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
NOD1-201ENST00000222823 SPRR2DP22532 72 aa3.86□□□□□ -1.79
NOD1-201ENST00000222823 KRTAP19-3Q7Z4W3 81 aa3.8□□□□□ -1.8
NOD1-201ENST00000222823 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
NOD1-201ENST00000222823 MT1LQ93083 61 aa3.78□□□□□ -1.8
NOD1-201ENST00000222823 MT1EP04732 61 aa3.77□□□□□ -1.81
NOD1-201ENST00000222823 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
NOD1-201ENST00000222823 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
NOD1-201ENST00000222823 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
NOD1-201ENST00000222823 USH2AO75445 5202 aa3.71□□□□□ -1.82
NOD1-201ENST00000222823 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
NOD1-201ENST00000222823 KRTAP19-6Q3LI70 58 aa3.69□□□□□ -1.82
NOD1-201ENST00000222823 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
NOD1-201ENST00000222823 KMT2DO14686 5537 aa3.68□□□□□ -1.82
NOD1-201ENST00000222823 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
NOD1-201ENST00000222823 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
NOD1-201ENST00000222823 MT1MQ8N339 61 aa3.63□□□□□ -1.83
NOD1-201ENST00000222823 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
NOD1-201ENST00000222823 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
NOD1-201ENST00000222823 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
NOD1-201ENST00000222823 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
NOD1-201ENST00000222823 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
NOD1-201ENST00000222823 MT3P25713 68 aa3.52□□□□□ -1.85
NOD1-201ENST00000222823 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
NOD1-201ENST00000222823 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
NOD1-201ENST00000222823 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
NOD1-201ENST00000222823 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
NOD1-201ENST00000222823 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
NOD1-201ENST00000222823 MT4P47944 62 aa3.44□□□□□ -1.86
NOD1-201ENST00000222823 NEBP20929 6669 aa3.4□□□□□ -1.87
NOD1-201ENST00000222823 PRM1P04553 51 aa3.37□□□□□ -1.87
NOD1-201ENST00000222823 MT1AP04731 61 aa3.37□□□□□ -1.87
NOD1-201ENST00000222823 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
NOD1-201ENST00000222823 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
NOD1-201ENST00000222823 LCE1DQ5T752 114 aa3.31□□□□□ -1.88
NOD1-201ENST00000222823 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
NOD1-201ENST00000222823 MUC12Q9UKN1 5478 aa3.3□□□□□ -1.88
NOD1-201ENST00000222823 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
NOD1-201ENST00000222823 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
NOD1-201ENST00000222823 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
NOD1-201ENST00000222823 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
NOD1-201ENST00000222823 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
NOD1-201ENST00000222823 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
NOD1-201ENST00000222823 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
NOD1-201ENST00000222823 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
NOD1-201ENST00000222823 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
NOD1-201ENST00000222823 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
NOD1-201ENST00000222823 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
NOD1-201ENST00000222823 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
NOD1-201ENST00000222823 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
NOD1-201ENST00000222823 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
NOD1-201ENST00000222823 KRTAP4-6Q9BYQ5 205 aa2.64□□□□□ -1.99
NOD1-201ENST00000222823 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
NOD1-201ENST00000222823 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
NOD1-201ENST00000222823 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
NOD1-201ENST00000222823 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
NOD1-201ENST00000222823 HMCN1Q96RW7 5635 aa2.59□□□□□ -2
NOD1-201ENST00000222823 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
NOD1-201ENST00000222823 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
NOD1-201ENST00000222823 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
NOD1-201ENST00000222823 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
NOD1-201ENST00000222823 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
NOD1-201ENST00000222823 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
NOD1-201ENST00000222823 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
NOD1-201ENST00000222823 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
NOD1-201ENST00000222823 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
NOD1-201ENST00000222823 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
NOD1-201ENST00000222823 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
NOD1-201ENST00000222823 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
NOD1-201ENST00000222823 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
NOD1-201ENST00000222823 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
NOD1-201ENST00000222823 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
NOD1-201ENST00000222823 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.12
NOD1-201ENST00000222823 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
NOD1-201ENST00000222823 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 77.6 ms