RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 KRTAP19-3Q7Z4W3 81 aa7.01□□□□□ -1.29
SNAPC2-201ENST00000221573 MT1LQ93083 61 aa6.96□□□□□ -1.29
SNAPC2-201ENST00000221573 SPRR2DP22532 72 aa6.96□□□□□ -1.3
SNAPC2-201ENST00000221573 LCE5AQ5TCM9 118 aa6.96□□□□□ -1.3
SNAPC2-201ENST00000221573 PP632Q6XCG6 107 aa6.93□□□□□ -1.3
SNAPC2-201ENST00000221573 MT1GP13640 62 aa6.87□□□□□ -1.31
SNAPC2-201ENST00000221573 KRTAP20-1Q3LI63 56 aa6.84□□□□□ -1.31
SNAPC2-201ENST00000221573 MT1MQ8N339 61 aa6.81□□□□□ -1.32
SNAPC2-201ENST00000221573 KRTAP2-3P0C7H8 128 aa6.78□□□□□ -1.32
SNAPC2-201ENST00000221573 KRTAP2-4Q9BYR9 128 aa6.78□□□□□ -1.32
SNAPC2-201ENST00000221573 PRAC1Q96KF2 57 aa6.76□□□□□ -1.33
SNAPC2-201ENST00000221573 KRTAP15-1Q3LI76 137 aa6.75□□□□□ -1.33
SNAPC2-201ENST00000221573 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
SNAPC2-201ENST00000221573 KTN1-AS1Q86SY8 53 aa6.72□□□□□ -1.33
SNAPC2-201ENST00000221573 SVIPQ8NHG7 77 aa6.71□□□□□ -1.33
SNAPC2-201ENST00000221573 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
SNAPC2-201ENST00000221573 KRTAP4-3Q9BYR4 195 aa6.67□□□□□ -1.34
SNAPC2-201ENST00000221573 KRTAP2-2Q9BYT5 123 aa6.6□□□□□ -1.35
SNAPC2-201ENST00000221573 KRTAP2-1Q9BYU5 128 aa6.6□□□□□ -1.35
SNAPC2-201ENST00000221573 DSTQ03001 7570 aaKnown RBP6.6□□□□□ -1.35
SNAPC2-201ENST00000221573 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
SNAPC2-201ENST00000221573 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
SNAPC2-201ENST00000221573 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
SNAPC2-201ENST00000221573 KRTAP9-6A8MVA2 160 aa6.2□□□□□ -1.42
SNAPC2-201ENST00000221573 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
SNAPC2-201ENST00000221573 KRTAP5-4Q6L8H1 288 aa6.16□□□□□ -1.42
SNAPC2-201ENST00000221573 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
SNAPC2-201ENST00000221573 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.43
SNAPC2-201ENST00000221573 MT4P47944 62 aa6.06□□□□□ -1.44
SNAPC2-201ENST00000221573 LCE1DQ5T752 114 aa6.05□□□□□ -1.44
SNAPC2-201ENST00000221573 KRTAP4-6Q9BYQ5 205 aa5.95□□□□□ -1.46
SNAPC2-201ENST00000221573 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
SNAPC2-201ENST00000221573 HMCN1Q96RW7 5635 aa5.92□□□□□ -1.46
SNAPC2-201ENST00000221573 MT1AP04731 61 aa5.92□□□□□ -1.46
SNAPC2-201ENST00000221573 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
SNAPC2-201ENST00000221573 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
SNAPC2-201ENST00000221573 SYNE1Q8NF91 8797 aaKnown RBP5.82□□□□□ -1.48
SNAPC2-201ENST00000221573 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
SNAPC2-201ENST00000221573 GPR98Q8WXG9 6306 aa5.7□□□□□ -1.5
SNAPC2-201ENST00000221573 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.5
SNAPC2-201ENST00000221573 KRTAP5-3Q6L8H2 238 aa5.6□□□□□ -1.51
SNAPC2-201ENST00000221573 LUZP6Q538Z0 58 aa5.51□□□□□ -1.53
SNAPC2-201ENST00000221573 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
SNAPC2-201ENST00000221573 KRTAP5-2Q701N4 177 aa5.5□□□□□ -1.53
SNAPC2-201ENST00000221573 AHNAK2Q8IVF2 5795 aa5.5□□□□□ -1.53
SNAPC2-201ENST00000221573 MT3P25713 68 aa5.37□□□□□ -1.55
SNAPC2-201ENST00000221573 KRTAP5-10Q6L8G5 202 aa5.33□□□□□ -1.56
SNAPC2-201ENST00000221573 NDUFAF8A1L188 74 aa5.21□□□□□ -1.58
SNAPC2-201ENST00000221573 KRTAP4-11Q9BYQ6 195 aa5.14□□□□□ -1.59
SNAPC2-201ENST00000221573 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
SNAPC2-201ENST00000221573 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
SNAPC2-201ENST00000221573 KRTAP5-8O75690 187 aa4.97□□□□□ -1.61
SNAPC2-201ENST00000221573 KRTAP5-1Q6L8H4 278 aa4.84□□□□□ -1.63
SNAPC2-201ENST00000221573 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
SNAPC2-201ENST00000221573 LCE1EQ5T753 118 aa4.78□□□□□ -1.64
SNAPC2-201ENST00000221573 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
SNAPC2-201ENST00000221573 H3BS24 57 aa4.61□□□□□ -1.67
SNAPC2-201ENST00000221573 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
SNAPC2-201ENST00000221573 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
SNAPC2-201ENST00000221573 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
SNAPC2-201ENST00000221573 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
SNAPC2-201ENST00000221573 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
SNAPC2-201ENST00000221573 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
SNAPC2-201ENST00000221573 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
SNAPC2-201ENST00000221573 AHNAKQ09666 5890 aaKnown RBP4.42□□□□□ -1.7
SNAPC2-201ENST00000221573 INE1O15225 51 aa4.22□□□□□ -1.73
SNAPC2-201ENST00000221573 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
SNAPC2-201ENST00000221573 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
SNAPC2-201ENST00000221573 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
SNAPC2-201ENST00000221573 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
SNAPC2-201ENST00000221573 PRM1P04553 51 aa3.79□□□□□ -1.8
SNAPC2-201ENST00000221573 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
SNAPC2-201ENST00000221573 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
SNAPC2-201ENST00000221573 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
SNAPC2-201ENST00000221573 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
SNAPC2-201ENST00000221573 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
SNAPC2-201ENST00000221573 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 169.8 ms