RNA–Protein interactions for RNA: ENST00000220584.8

FDFT1-201, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDFT1, Length 2,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-201ENST00000220584 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
FDFT1-201ENST00000220584 KRTAP9-6A8MVA2 160 aa7.47□□□□□ -1.21
FDFT1-201ENST00000220584 SYNE2Q8WXH0 6885 aaKnown RBP7.38□□□□□ -1.23
FDFT1-201ENST00000220584 MUC12Q9UKN1 5478 aa7.37□□□□□ -1.23
FDFT1-201ENST00000220584 SPRR2FQ96RM1 72 aa7.31□□□□□ -1.24
FDFT1-201ENST00000220584 KRTAP19-3Q7Z4W3 81 aa7.23□□□□□ -1.25
FDFT1-201ENST00000220584 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.22□□□□□ -1.25
FDFT1-201ENST00000220584 INE1O15225 51 aa7.2□□□□□ -1.26
FDFT1-201ENST00000220584 MT1GP13640 62 aa7.2□□□□□ -1.26
FDFT1-201ENST00000220584 KRTAP5-9P26371 169 aa7.18□□□□□ -1.26
FDFT1-201ENST00000220584 MT1MQ8N339 61 aa7.18□□□□□ -1.26
FDFT1-201ENST00000220584 KRTAP2-3P0C7H8 128 aa7.14□□□□□ -1.27
FDFT1-201ENST00000220584 KRTAP2-4Q9BYR9 128 aa7.14□□□□□ -1.27
FDFT1-201ENST00000220584 KRTAP2-1Q9BYU5 128 aa7.14□□□□□ -1.27
FDFT1-201ENST00000220584 KRTAP4-3Q9BYR4 195 aa7.12□□□□□ -1.27
FDFT1-201ENST00000220584 MDN1Q9NU22 5596 aa7.07□□□□□ -1.28
FDFT1-201ENST00000220584 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
FDFT1-201ENST00000220584 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
FDFT1-201ENST00000220584 KRTAP6-3Q3LI67 103 aa7.01□□□□□ -1.29
FDFT1-201ENST00000220584 LCE1AQ5T7P2 110 aa6.99□□□□□ -1.29
FDFT1-201ENST00000220584 SPRR2EP22531 72 aa6.91□□□□□ -1.3
FDFT1-201ENST00000220584 SPRR2BP35325 72 aa6.91□□□□□ -1.3
FDFT1-201ENST00000220584 SPRR2AP35326 72 aa6.91□□□□□ -1.3
FDFT1-201ENST00000220584 KRTAP9-7A8MTY7 169 aa6.86□□□□□ -1.31
FDFT1-201ENST00000220584 DSTQ03001 7570 aaKnown RBP6.81□□□□□ -1.32
FDFT1-201ENST00000220584 SPRR2DP22532 72 aa6.64□□□□□ -1.35
FDFT1-201ENST00000220584 NEBP20929 6669 aa6.58□□□□□ -1.36
FDFT1-201ENST00000220584 MT1AP04731 61 aa6.42□□□□□ -1.38
FDFT1-201ENST00000220584 KRTAP6-1Q3LI64 71 aa6.41□□□□□ -1.38
FDFT1-201ENST00000220584 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
FDFT1-201ENST00000220584 KRTAP5-5Q701N2 237 aaPredicted RBP6.38□□□□□ -1.39
FDFT1-201ENST00000220584 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
FDFT1-201ENST00000220584 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
FDFT1-201ENST00000220584 SYNE1Q8NF91 8797 aaKnown RBP6.1□□□□□ -1.43
FDFT1-201ENST00000220584 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
FDFT1-201ENST00000220584 KRTAP5-4Q6L8H1 288 aa6.01□□□□□ -1.45
FDFT1-201ENST00000220584 KRTAP20-1Q3LI63 56 aa6□□□□□ -1.45
FDFT1-201ENST00000220584 LCE3DQ9BYE3 92 aa5.99□□□□□ -1.45
FDFT1-201ENST00000220584 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
FDFT1-201ENST00000220584 LCE3EQ5T5B0 92 aa5.89□□□□□ -1.47
FDFT1-201ENST00000220584 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
FDFT1-201ENST00000220584 MT4P47944 62 aa5.82□□□□□ -1.48
FDFT1-201ENST00000220584 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
FDFT1-201ENST00000220584 KRTAP6-2Q3LI66 62 aa5.8□□□□□ -1.48
FDFT1-201ENST00000220584 MT3P25713 68 aa5.79□□□□□ -1.48
FDFT1-201ENST00000220584 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
FDFT1-201ENST00000220584 HMCN1Q96RW7 5635 aa5.67□□□□□ -1.5
FDFT1-201ENST00000220584 KRTAP20-2Q3LI61 65 aa5.64□□□□□ -1.51
FDFT1-201ENST00000220584 KRTAP5-2Q701N4 177 aa5.46□□□□□ -1.54
FDFT1-201ENST00000220584 PRM1P04553 51 aa5.45□□□□□ -1.54
FDFT1-201ENST00000220584 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
FDFT1-201ENST00000220584 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
FDFT1-201ENST00000220584 GPR98Q8WXG9 6306 aa5.13□□□□□ -1.59
FDFT1-201ENST00000220584 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
FDFT1-201ENST00000220584 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
FDFT1-201ENST00000220584 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
FDFT1-201ENST00000220584 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
FDFT1-201ENST00000220584 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
FDFT1-201ENST00000220584 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
FDFT1-201ENST00000220584 KRTAP5-10Q6L8G5 202 aa4.7□□□□□ -1.66
FDFT1-201ENST00000220584 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.66
FDFT1-201ENST00000220584 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
FDFT1-201ENST00000220584 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
FDFT1-201ENST00000220584 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
FDFT1-201ENST00000220584 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
FDFT1-201ENST00000220584 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
FDFT1-201ENST00000220584 KRTAP21-2Q3LI59 83 aa4.16□□□□□ -1.74
FDFT1-201ENST00000220584 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
FDFT1-201ENST00000220584 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
FDFT1-201ENST00000220584 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
FDFT1-201ENST00000220584 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
FDFT1-201ENST00000220584 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
FDFT1-201ENST00000220584 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
FDFT1-201ENST00000220584 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
FDFT1-201ENST00000220584 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
FDFT1-201ENST00000220584 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
FDFT1-201ENST00000220584 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 48.6 ms