RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
USP11-201ENST00000218348 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
USP11-201ENST00000218348 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
USP11-201ENST00000218348 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
USP11-201ENST00000218348 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
USP11-201ENST00000218348 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
USP11-201ENST00000218348 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
USP11-201ENST00000218348 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
USP11-201ENST00000218348 MT1EP04732 61 aa3.48□□□□□ -1.85
USP11-201ENST00000218348 NEBP20929 6669 aa3.47□□□□□ -1.85
USP11-201ENST00000218348 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
USP11-201ENST00000218348 MT1LQ93083 61 aa3.45□□□□□ -1.86
USP11-201ENST00000218348 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
USP11-201ENST00000218348 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
USP11-201ENST00000218348 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
USP11-201ENST00000218348 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
USP11-201ENST00000218348 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
USP11-201ENST00000218348 MT1GP13640 62 aa3.34□□□□□ -1.87
USP11-201ENST00000218348 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
USP11-201ENST00000218348 SPRR2EP22531 72 aa3.28□□□□□ -1.88
USP11-201ENST00000218348 SPRR2BP35325 72 aa3.28□□□□□ -1.88
USP11-201ENST00000218348 SPRR2AP35326 72 aa3.28□□□□□ -1.88
USP11-201ENST00000218348 MT1MQ8N339 61 aa3.28□□□□□ -1.88
USP11-201ENST00000218348 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
USP11-201ENST00000218348 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
USP11-201ENST00000218348 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
USP11-201ENST00000218348 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
USP11-201ENST00000218348 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
USP11-201ENST00000218348 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
USP11-201ENST00000218348 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
USP11-201ENST00000218348 SPRR2DP22532 72 aa3.16□□□□□ -1.9
USP11-201ENST00000218348 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.91
USP11-201ENST00000218348 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
USP11-201ENST00000218348 LCE3BQ5TA77 95 aa3.09□□□□□ -1.91
USP11-201ENST00000218348 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
USP11-201ENST00000218348 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
USP11-201ENST00000218348 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
USP11-201ENST00000218348 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
USP11-201ENST00000218348 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
USP11-201ENST00000218348 PRM1P04553 51 aa2.92□□□□□ -1.94
USP11-201ENST00000218348 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
USP11-201ENST00000218348 MT1AP04731 61 aa2.86□□□□□ -1.95
USP11-201ENST00000218348 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
USP11-201ENST00000218348 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
USP11-201ENST00000218348 LCE4AQ5TA78 99 aa2.86□□□□□ -1.95
USP11-201ENST00000218348 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
USP11-201ENST00000218348 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
USP11-201ENST00000218348 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
USP11-201ENST00000218348 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
USP11-201ENST00000218348 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
USP11-201ENST00000218348 MT4P47944 62 aa2.73□□□□□ -1.97
USP11-201ENST00000218348 KRTAP9-4Q9BYQ2 154 aa2.72□□□□□ -1.97
USP11-201ENST00000218348 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.97
USP11-201ENST00000218348 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
USP11-201ENST00000218348 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
USP11-201ENST00000218348 MT3P25713 68 aa2.61□□□□□ -1.99
USP11-201ENST00000218348 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
USP11-201ENST00000218348 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
USP11-201ENST00000218348 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
USP11-201ENST00000218348 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.02
USP11-201ENST00000218348 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
USP11-201ENST00000218348 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
USP11-201ENST00000218348 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
USP11-201ENST00000218348 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
USP11-201ENST00000218348 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
USP11-201ENST00000218348 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
USP11-201ENST00000218348 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
USP11-201ENST00000218348 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
USP11-201ENST00000218348 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
USP11-201ENST00000218348 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
USP11-201ENST00000218348 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
USP11-201ENST00000218348 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
USP11-201ENST00000218348 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
USP11-201ENST00000218348 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
USP11-201ENST00000218348 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
USP11-201ENST00000218348 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
USP11-201ENST00000218348 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 70.7 ms