RNA–Protein interactions for RNA: ENST00000216361.8

COCH-201, Transcript of cochlin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COCH, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-201ENST00000216361 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
COCH-201ENST00000216361 KRTAP19-6Q3LI70 58 aa6.78□□□□□ -1.32
COCH-201ENST00000216361 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
COCH-201ENST00000216361 FSIP2Q5CZC0 6907 aa6.76□□□□□ -1.33
COCH-201ENST00000216361 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
COCH-201ENST00000216361 KRTAP4-3Q9BYR4 195 aa6.69□□□□□ -1.34
COCH-201ENST00000216361 MT1GP13640 62 aa6.62□□□□□ -1.35
COCH-201ENST00000216361 MT1MQ8N339 61 aa6.59□□□□□ -1.35
COCH-201ENST00000216361 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
COCH-201ENST00000216361 FCGBPQ9Y6R7 5405 aaPredicted RBP6.53□□□□□ -1.36
COCH-201ENST00000216361 MUC12Q9UKN1 5478 aa6.47□□□□□ -1.37
COCH-201ENST00000216361 KRTAP12-4P60329 112 aa6.35□□□□□ -1.39
COCH-201ENST00000216361 KRTAP9-7A8MTY7 169 aa6.32□□□□□ -1.4
COCH-201ENST00000216361 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
COCH-201ENST00000216361 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.31□□□□□ -1.4
COCH-201ENST00000216361 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.42
COCH-201ENST00000216361 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
COCH-201ENST00000216361 DSTQ03001 7570 aaKnown RBP6.15□□□□□ -1.43
COCH-201ENST00000216361 MACF1Q9UPN3 7388 aaKnown RBP6.13□□□□□ -1.43
COCH-201ENST00000216361 KRTAP4-9Q9BYQ8 210 aa6.07□□□□□ -1.44
COCH-201ENST00000216361 MT1AP04731 61 aa6.06□□□□□ -1.44
COCH-201ENST00000216361 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
COCH-201ENST00000216361 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
COCH-201ENST00000216361 SYNE1Q8NF91 8797 aaKnown RBP5.88□□□□□ -1.47
COCH-201ENST00000216361 LCE3DQ9BYE3 92 aa5.87□□□□□ -1.47
COCH-201ENST00000216361 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
COCH-201ENST00000216361 KRTAP5-5Q701N2 237 aaPredicted RBP5.82□□□□□ -1.48
COCH-201ENST00000216361 LCE3EQ5T5B0 92 aa5.81□□□□□ -1.48
COCH-201ENST00000216361 LCE1AQ5T7P2 110 aa5.79□□□□□ -1.48
COCH-201ENST00000216361 MDN1Q9NU22 5596 aa5.78□□□□□ -1.48
COCH-201ENST00000216361 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
COCH-201ENST00000216361 NEBP20929 6669 aa5.65□□□□□ -1.5
COCH-201ENST00000216361 PRM1P04553 51 aa5.64□□□□□ -1.51
COCH-201ENST00000216361 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
COCH-201ENST00000216361 SPRR2EP22531 72 aa5.58□□□□□ -1.52
COCH-201ENST00000216361 SPRR2BP35325 72 aa5.58□□□□□ -1.52
COCH-201ENST00000216361 SPRR2AP35326 72 aa5.58□□□□□ -1.52
COCH-201ENST00000216361 KRTAP20-1Q3LI63 56 aa5.53□□□□□ -1.52
COCH-201ENST00000216361 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
COCH-201ENST00000216361 SPRR2DP22532 72 aa5.33□□□□□ -1.56
COCH-201ENST00000216361 MT3P25713 68 aa5.32□□□□□ -1.56
COCH-201ENST00000216361 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
COCH-201ENST00000216361 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
COCH-201ENST00000216361 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
COCH-201ENST00000216361 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
COCH-201ENST00000216361 GPR98Q8WXG9 6306 aa4.78□□□□□ -1.64
COCH-201ENST00000216361 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
COCH-201ENST00000216361 MT4P47944 62 aa4.7□□□□□ -1.66
COCH-201ENST00000216361 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
COCH-201ENST00000216361 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
COCH-201ENST00000216361 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
COCH-201ENST00000216361 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
COCH-201ENST00000216361 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
COCH-201ENST00000216361 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
COCH-201ENST00000216361 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
COCH-201ENST00000216361 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
COCH-201ENST00000216361 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
COCH-201ENST00000216361 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
COCH-201ENST00000216361 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
COCH-201ENST00000216361 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
COCH-201ENST00000216361 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.73
COCH-201ENST00000216361 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
COCH-201ENST00000216361 LCE1CQ5T751 118 aa4.09□□□□□ -1.76
COCH-201ENST00000216361 KRTAP21-2Q3LI59 83 aa3.89□□□□□ -1.79
COCH-201ENST00000216361 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
COCH-201ENST00000216361 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
COCH-201ENST00000216361 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
COCH-201ENST00000216361 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
COCH-201ENST00000216361 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
COCH-201ENST00000216361 KRTAP21-1Q3LI58 79 aa3.59□□□□□ -1.83
COCH-201ENST00000216361 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
COCH-201ENST00000216361 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
COCH-201ENST00000216361 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
COCH-201ENST00000216361 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
COCH-201ENST00000216361 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
COCH-201ENST00000216361 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
COCH-201ENST00000216361 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 85.8 ms