RNA–Protein interactions for RNA: ENST00000209728.8

CDC6-201, Transcript of cell division cycle 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC6, Length 4,810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-201ENST00000209728 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
CDC6-201ENST00000209728 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
CDC6-201ENST00000209728 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
CDC6-201ENST00000209728 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
CDC6-201ENST00000209728 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
CDC6-201ENST00000209728 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
CDC6-201ENST00000209728 MT1MQ8N339 61 aa3.98□□□□□ -1.77
CDC6-201ENST00000209728 SPRR2DP22532 72 aa3.97□□□□□ -1.77
CDC6-201ENST00000209728 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
CDC6-201ENST00000209728 LCE2AQ5TA79 106 aaPredicted RBP3.91□□□□□ -1.78
CDC6-201ENST00000209728 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
CDC6-201ENST00000209728 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
CDC6-201ENST00000209728 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
CDC6-201ENST00000209728 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
CDC6-201ENST00000209728 FCGBPQ9Y6R7 5405 aaPredicted RBP3.82□□□□□ -1.8
CDC6-201ENST00000209728 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.8
CDC6-201ENST00000209728 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
CDC6-201ENST00000209728 PRM1P04553 51 aa3.76□□□□□ -1.81
CDC6-201ENST00000209728 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
CDC6-201ENST00000209728 USH2AO75445 5202 aa3.76□□□□□ -1.81
CDC6-201ENST00000209728 KMT2DO14686 5537 aa3.76□□□□□ -1.81
CDC6-201ENST00000209728 MT3P25713 68 aa3.69□□□□□ -1.82
CDC6-201ENST00000209728 MT1AP04731 61 aa3.64□□□□□ -1.83
CDC6-201ENST00000209728 LCE2DQ5TA82 110 aaPredicted RBP3.62□□□□□ -1.83
CDC6-201ENST00000209728 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
CDC6-201ENST00000209728 MT4P47944 62 aa3.6□□□□□ -1.83
CDC6-201ENST00000209728 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
CDC6-201ENST00000209728 LCE5AQ5TCM9 118 aa3.53□□□□□ -1.85
CDC6-201ENST00000209728 MUC12Q9UKN1 5478 aa3.47□□□□□ -1.85
CDC6-201ENST00000209728 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
CDC6-201ENST00000209728 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
CDC6-201ENST00000209728 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
CDC6-201ENST00000209728 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.87
CDC6-201ENST00000209728 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
CDC6-201ENST00000209728 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
CDC6-201ENST00000209728 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
CDC6-201ENST00000209728 SSPOA2VEC9 5147 aa3.33□□□□□ -1.88
CDC6-201ENST00000209728 KRTAP9-6A0A140TA67 174 aa3.24□□□□□ -1.89
CDC6-201ENST00000209728 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
CDC6-201ENST00000209728 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
CDC6-201ENST00000209728 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
CDC6-201ENST00000209728 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
CDC6-201ENST00000209728 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
CDC6-201ENST00000209728 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
CDC6-201ENST00000209728 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
CDC6-201ENST00000209728 KRTAP5-9P26371 169 aa3□□□□□ -1.93
CDC6-201ENST00000209728 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
CDC6-201ENST00000209728 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
CDC6-201ENST00000209728 NEBP20929 6669 aa2.87□□□□□ -1.95
CDC6-201ENST00000209728 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
CDC6-201ENST00000209728 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
CDC6-201ENST00000209728 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
CDC6-201ENST00000209728 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
CDC6-201ENST00000209728 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
CDC6-201ENST00000209728 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
CDC6-201ENST00000209728 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
CDC6-201ENST00000209728 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
CDC6-201ENST00000209728 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
CDC6-201ENST00000209728 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
CDC6-201ENST00000209728 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
CDC6-201ENST00000209728 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
CDC6-201ENST00000209728 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
CDC6-201ENST00000209728 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
CDC6-201ENST00000209728 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
CDC6-201ENST00000209728 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
CDC6-201ENST00000209728 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
CDC6-201ENST00000209728 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
CDC6-201ENST00000209728 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
CDC6-201ENST00000209728 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
CDC6-201ENST00000209728 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
CDC6-201ENST00000209728 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
CDC6-201ENST00000209728 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
CDC6-201ENST00000209728 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CDC6-201ENST00000209728 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
CDC6-201ENST00000209728 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
CDC6-201ENST00000209728 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
CDC6-201ENST00000209728 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 258.1 ms