RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 SPRR2FQ96RM1 72 aa6.37□□□□□ -1.39
CTSA-201ENST00000191018 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
CTSA-201ENST00000191018 MT1GP13640 62 aa6.33□□□□□ -1.4
CTSA-201ENST00000191018 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
CTSA-201ENST00000191018 SYNE2Q8WXH0 6885 aaKnown RBP6.3□□□□□ -1.4
CTSA-201ENST00000191018 H3BS24 57 aa6.28□□□□□ -1.4
CTSA-201ENST00000191018 MT1MQ8N339 61 aa6.28□□□□□ -1.4
CTSA-201ENST00000191018 KRTAP5-9P26371 169 aa6.26□□□□□ -1.41
CTSA-201ENST00000191018 LCE5AQ5TCM9 118 aa6.26□□□□□ -1.41
CTSA-201ENST00000191018 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.19□□□□□ -1.42
CTSA-201ENST00000191018 KRTAP4-3Q9BYR4 195 aa6.19□□□□□ -1.42
CTSA-201ENST00000191018 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.44
CTSA-201ENST00000191018 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.44
CTSA-201ENST00000191018 MDN1Q9NU22 5596 aa6.02□□□□□ -1.44
CTSA-201ENST00000191018 KRTAP6-3Q3LI67 103 aa6.02□□□□□ -1.45
CTSA-201ENST00000191018 SPRR2EP22531 72 aa5.98□□□□□ -1.45
CTSA-201ENST00000191018 SPRR2BP35325 72 aa5.98□□□□□ -1.45
CTSA-201ENST00000191018 SPRR2AP35326 72 aa5.98□□□□□ -1.45
CTSA-201ENST00000191018 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
CTSA-201ENST00000191018 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
CTSA-201ENST00000191018 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
CTSA-201ENST00000191018 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
CTSA-201ENST00000191018 KRTAP2-1Q9BYU5 128 aa5.92□□□□□ -1.46
CTSA-201ENST00000191018 DSTQ03001 7570 aaKnown RBP5.91□□□□□ -1.46
CTSA-201ENST00000191018 SPRR2DP22532 72 aa5.75□□□□□ -1.49
CTSA-201ENST00000191018 KRTAP5-5Q701N2 237 aaPredicted RBP5.66□□□□□ -1.5
CTSA-201ENST00000191018 NEBP20929 6669 aa5.66□□□□□ -1.5
CTSA-201ENST00000191018 MT1AP04731 61 aa5.58□□□□□ -1.52
CTSA-201ENST00000191018 KRTAP6-1Q3LI64 71 aa5.56□□□□□ -1.52
CTSA-201ENST00000191018 INE1O15225 51 aa5.55□□□□□ -1.52
CTSA-201ENST00000191018 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
CTSA-201ENST00000191018 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
CTSA-201ENST00000191018 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
CTSA-201ENST00000191018 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
CTSA-201ENST00000191018 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
CTSA-201ENST00000191018 KRTAP4-9Q9BYQ8 210 aa5.18□□□□□ -1.58
CTSA-201ENST00000191018 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
CTSA-201ENST00000191018 KRTAP2-2Q9BYT5 123 aa5.12□□□□□ -1.59
CTSA-201ENST00000191018 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
CTSA-201ENST00000191018 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
CTSA-201ENST00000191018 MT3P25713 68 aa5.03□□□□□ -1.6
CTSA-201ENST00000191018 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
CTSA-201ENST00000191018 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
CTSA-201ENST00000191018 MT4P47944 62 aa4.99□□□□□ -1.61
CTSA-201ENST00000191018 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
CTSA-201ENST00000191018 LCE3EQ5T5B0 92 aa4.89□□□□□ -1.63
CTSA-201ENST00000191018 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
CTSA-201ENST00000191018 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
CTSA-201ENST00000191018 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
CTSA-201ENST00000191018 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
CTSA-201ENST00000191018 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
CTSA-201ENST00000191018 PRM1P04553 51 aa4.37□□□□□ -1.71
CTSA-201ENST00000191018 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
CTSA-201ENST00000191018 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
CTSA-201ENST00000191018 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
CTSA-201ENST00000191018 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
CTSA-201ENST00000191018 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
CTSA-201ENST00000191018 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
CTSA-201ENST00000191018 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
CTSA-201ENST00000191018 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
CTSA-201ENST00000191018 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
CTSA-201ENST00000191018 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
CTSA-201ENST00000191018 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
CTSA-201ENST00000191018 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
CTSA-201ENST00000191018 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
CTSA-201ENST00000191018 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
CTSA-201ENST00000191018 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
CTSA-201ENST00000191018 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
CTSA-201ENST00000191018 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
CTSA-201ENST00000191018 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
CTSA-201ENST00000191018 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
CTSA-201ENST00000191018 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
CTSA-201ENST00000191018 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
CTSA-201ENST00000191018 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
CTSA-201ENST00000191018 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
CTSA-201ENST00000191018 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
CTSA-201ENST00000191018 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms