RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
LAPTM4A-201ENST00000175091 NDUFAF8A1L188 74 aa5.43□□□□□ -1.54
LAPTM4A-201ENST00000175091 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
LAPTM4A-201ENST00000175091 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
LAPTM4A-201ENST00000175091 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
LAPTM4A-201ENST00000175091 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
LAPTM4A-201ENST00000175091 KRTAP5-9P26371 169 aa5.39□□□□□ -1.55
LAPTM4A-201ENST00000175091 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
LAPTM4A-201ENST00000175091 MT1GP13640 62 aa5.34□□□□□ -1.55
LAPTM4A-201ENST00000175091 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
LAPTM4A-201ENST00000175091 MT1MQ8N339 61 aa5.32□□□□□ -1.56
LAPTM4A-201ENST00000175091 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
LAPTM4A-201ENST00000175091 MDN1Q9NU22 5596 aa5.27□□□□□ -1.57
LAPTM4A-201ENST00000175091 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
LAPTM4A-201ENST00000175091 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.57
LAPTM4A-201ENST00000175091 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.57
LAPTM4A-201ENST00000175091 KRTAP6-3Q3LI67 103 aa5.21□□□□□ -1.58
LAPTM4A-201ENST00000175091 SPRR2EP22531 72 aa5.14□□□□□ -1.59
LAPTM4A-201ENST00000175091 SPRR2BP35325 72 aa5.14□□□□□ -1.59
LAPTM4A-201ENST00000175091 SPRR2AP35326 72 aa5.14□□□□□ -1.59
LAPTM4A-201ENST00000175091 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
LAPTM4A-201ENST00000175091 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
LAPTM4A-201ENST00000175091 SPRR2DP22532 72 aa4.95□□□□□ -1.62
LAPTM4A-201ENST00000175091 KRTAP2-3P0C7H8 128 aa4.89□□□□□ -1.63
LAPTM4A-201ENST00000175091 KRTAP2-4Q9BYR9 128 aa4.89□□□□□ -1.63
LAPTM4A-201ENST00000175091 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
LAPTM4A-201ENST00000175091 NEBP20929 6669 aa4.88□□□□□ -1.63
LAPTM4A-201ENST00000175091 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
LAPTM4A-201ENST00000175091 LCE3BQ5TA77 95 aa4.75□□□□□ -1.65
LAPTM4A-201ENST00000175091 MT1AP04731 61 aa4.71□□□□□ -1.66
LAPTM4A-201ENST00000175091 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
LAPTM4A-201ENST00000175091 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
LAPTM4A-201ENST00000175091 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
LAPTM4A-201ENST00000175091 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
LAPTM4A-201ENST00000175091 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
LAPTM4A-201ENST00000175091 INE1O15225 51 aa4.47□□□□□ -1.69
LAPTM4A-201ENST00000175091 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
LAPTM4A-201ENST00000175091 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
LAPTM4A-201ENST00000175091 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
LAPTM4A-201ENST00000175091 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
LAPTM4A-201ENST00000175091 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
LAPTM4A-201ENST00000175091 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
LAPTM4A-201ENST00000175091 MT4P47944 62 aa4.3□□□□□ -1.72
LAPTM4A-201ENST00000175091 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
LAPTM4A-201ENST00000175091 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
LAPTM4A-201ENST00000175091 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
LAPTM4A-201ENST00000175091 MT3P25713 68 aa4.24□□□□□ -1.73
LAPTM4A-201ENST00000175091 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
LAPTM4A-201ENST00000175091 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
LAPTM4A-201ENST00000175091 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.74
LAPTM4A-201ENST00000175091 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
LAPTM4A-201ENST00000175091 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
LAPTM4A-201ENST00000175091 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
LAPTM4A-201ENST00000175091 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
LAPTM4A-201ENST00000175091 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
LAPTM4A-201ENST00000175091 GPR98Q8WXG9 6306 aa3.86□□□□□ -1.79
LAPTM4A-201ENST00000175091 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
LAPTM4A-201ENST00000175091 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
LAPTM4A-201ENST00000175091 PRM1P04553 51 aa3.59□□□□□ -1.83
LAPTM4A-201ENST00000175091 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
LAPTM4A-201ENST00000175091 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
LAPTM4A-201ENST00000175091 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
LAPTM4A-201ENST00000175091 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
LAPTM4A-201ENST00000175091 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
LAPTM4A-201ENST00000175091 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
LAPTM4A-201ENST00000175091 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
LAPTM4A-201ENST00000175091 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
LAPTM4A-201ENST00000175091 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
LAPTM4A-201ENST00000175091 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
LAPTM4A-201ENST00000175091 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
LAPTM4A-201ENST00000175091 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
LAPTM4A-201ENST00000175091 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
LAPTM4A-201ENST00000175091 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
LAPTM4A-201ENST00000175091 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
LAPTM4A-201ENST00000175091 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
LAPTM4A-201ENST00000175091 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
LAPTM4A-201ENST00000175091 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 75.3 ms