RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Olfr1402Q8VET1 320 aa11.18□□□□□ -0.62
Nup88-202ENSMUST00000108530 AhspQ9CY02 102 aa11.18□□□□□ -0.62
Nup88-202ENSMUST00000108530 Trav14d-1A0A075B6B1 121 aa11.18□□□□□ -0.62
Nup88-202ENSMUST00000108530 Klf12O35738 402 aa11.18□□□□□ -0.62
Nup88-202ENSMUST00000108530 Hoxd3P09027 433 aa11.18□□□□□ -0.62
Nup88-202ENSMUST00000108530 NpbQ8K4P1 119 aa11.18□□□□□ -0.62
Nup88-202ENSMUST00000108530 Hyls1Q9CXX0 307 aa11.18□□□□□ -0.62
Nup88-202ENSMUST00000108530 Mmp23O88676 391 aa11.17□□□□□ -0.62
Nup88-202ENSMUST00000108530 Gm5150Q1AN92 299 aa11.17□□□□□ -0.62
Nup88-202ENSMUST00000108530 Klk15Q8CGR4 254 aa11.17□□□□□ -0.62
Nup88-202ENSMUST00000108530 Ube2e2Q91W82 201 aa11.17□□□□□ -0.62
Nup88-202ENSMUST00000108530 Ighv1-52A0A0A6YXC3 117 aa11.17□□□□□ -0.62
Nup88-202ENSMUST00000108530 Igkv4-70A0A0B4J1I5 116 aa11.17□□□□□ -0.62
Nup88-202ENSMUST00000108530 Ighv1-82A0A0G2JEU7 117 aa11.17□□□□□ -0.62
Nup88-202ENSMUST00000108530 DdtO35215 118 aa11.17□□□□□ -0.62
Nup88-202ENSMUST00000108530 Hcfc2Q9D968 241 aa11.17□□□□□ -0.62
Nup88-202ENSMUST00000108530 Q9DAA3 117 aa11.17□□□□□ -0.62
Nup88-202ENSMUST00000108530 Ighv1-9A0A0A6YW37 117 aa11.16□□□□□ -0.62
Nup88-202ENSMUST00000108530 AY761185Q5ERI8 94 aa11.16□□□□□ -0.62
Nup88-202ENSMUST00000108530 Foxc2Q61850 494 aa11.16□□□□□ -0.62
Nup88-202ENSMUST00000108530 Trbv17A0A140T8P8 114 aa11.16□□□□□ -0.62
Nup88-202ENSMUST00000108530 Itgb1bp1O35671 200 aa11.16□□□□□ -0.62
Nup88-202ENSMUST00000108530 P01801 115 aa11.16□□□□□ -0.62
Nup88-202ENSMUST00000108530 P01802 115 aa11.16□□□□□ -0.62
Nup88-202ENSMUST00000108530 Igll1P20764 209 aa11.16□□□□□ -0.62
Nup88-202ENSMUST00000108530 Rnf24Q8BGI1 148 aa11.16□□□□□ -0.62
Nup88-202ENSMUST00000108530 Plpp2Q9DAX2 276 aa11.16□□□□□ -0.62
Nup88-202ENSMUST00000108530 Ube2l6Q9QZU9 153 aa11.16□□□□□ -0.62
Nup88-202ENSMUST00000108530 P01739 132 aa11.15□□□□□ -0.62
Nup88-202ENSMUST00000108530 Olfr1012Q8VFJ7 311 aa11.15□□□□□ -0.62
Nup88-202ENSMUST00000108530 Plekhb2Q9QZC7 221 aa11.15□□□□□ -0.62
Nup88-202ENSMUST00000108530 P01750 117 aa11.14□□□□□ -0.63
Nup88-202ENSMUST00000108530 RnasekQ8K3C0 98 aa11.14□□□□□ -0.63
Nup88-202ENSMUST00000108530 Olfr1195Q8VG21 308 aa11.14□□□□□ -0.63
Nup88-202ENSMUST00000108530 Ube2cQ9D1C1 179 aa11.14□□□□□ -0.63
Nup88-202ENSMUST00000108530 Scgb1b3J3QJY4 93 aa11.14□□□□□ -0.63
Nup88-202ENSMUST00000108530 Erdr1J3QMM0 206 aa11.14□□□□□ -0.63
Nup88-202ENSMUST00000108530 Ighv14-1A0A075B5R4 117 aa11.13□□□□□ -0.63
Nup88-202ENSMUST00000108530 1810011H11RikE9PVZ2 95 aa11.13□□□□□ -0.63
Nup88-202ENSMUST00000108530 Igkv4-69A0A0B4J1I6 116 aa11.13□□□□□ -0.63
Nup88-202ENSMUST00000108530 Vmn1r119E9Q4H3 307 aa11.13□□□□□ -0.63
Nup88-202ENSMUST00000108530 Gm8439G3UWA7 96 aa11.13□□□□□ -0.63
Nup88-202ENSMUST00000108530 Srsf2Q62093 221 aaKnown RBP11.13□□□□□ -0.63
Nup88-202ENSMUST00000108530 Slc35d2Q762D5 326 aa11.13□□□□□ -0.63
Nup88-202ENSMUST00000108530 Q9D7E4 109 aa11.13□□□□□ -0.63
Nup88-202ENSMUST00000108530 Avpi1Q9D7H4 142 aa11.13□□□□□ -0.63
Nup88-202ENSMUST00000108530 Ighv2-7A0A075B5Q8 116 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Ighv1-64A0A075B5X3 117 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Trav14-3A0A075B607 120 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Ighv1-12A0A0A6YXJ9 117 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 A930009A15RikG3UYI6 118 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Trav3-3Q5R1C3 114 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Q9DAB9 146 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Dynlrb2Q9DAJ5 96 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Arhgap32Q811P8 2089 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 FlnbQ80X90 2602 aaKnown RBP11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Ighv12-3A0A075B5T1 117 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Gm26661M0QWV4 156 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 P01727 129 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Gm5464Q3UY29 175 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Olfr317Q5NCD6 327 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Vsig8Q6P3A4 417 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Vmn1r202Q8R259 302 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Olfr1262Q8VGN2 304 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Olfr954Q9EQB6 314 aa11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 NipblQ6KCD5 2798 aaKnown RBP11.12□□□□□ -0.63
Nup88-202ENSMUST00000108530 Hsbp1l1B2RXB2 72 aa11.11□□□□□ -0.63
Nup88-202ENSMUST00000108530 AponG3X9D6 251 aa11.11□□□□□ -0.63
Nup88-202ENSMUST00000108530 Rnase1P00683 149 aa11.11□□□□□ -0.63
Nup88-202ENSMUST00000108530 Sub1P11031 127 aaKnown RBP11.11□□□□□ -0.63
Nup88-202ENSMUST00000108530 Ucn2Q99ML8 113 aa11.11□□□□□ -0.63
Nup88-202ENSMUST00000108530 Spcs1Q9D958 161 aa11.11□□□□□ -0.63
Nup88-202ENSMUST00000108530 Wfdc2Q9DAU7 174 aa11.11□□□□□ -0.63
Nup88-202ENSMUST00000108530 Tax1bp3Q9DBG9 124 aa11.11□□□□□ -0.63
Nup88-202ENSMUST00000108530 Ins1P01325 108 aa11.11□□□□□ -0.63
Nup88-202ENSMUST00000108530 Klk10Q99M20 278 aa11.11□□□□□ -0.63
Nup88-202ENSMUST00000108530 Obox1Q9D350 204 aa11.11□□□□□ -0.63
Nup88-202ENSMUST00000108530 Tenm4Q3UHK6 2771 aa11.1□□□□□ -0.63
Nup88-202ENSMUST00000108530 Trav9-2A0A075B647 113 aa11.1□□□□□ -0.63
Nup88-202ENSMUST00000108530 Trav9-4A0A0B4J1K2 113 aa11.1□□□□□ -0.63
Nup88-202ENSMUST00000108530 Olfr311Q5NC59 308 aa11.1□□□□□ -0.63
Nup88-202ENSMUST00000108530 4930474N05RikQ8BVR5 218 aa11.1□□□□□ -0.63
Nup88-202ENSMUST00000108530 Olfr365Q8VFT2 312 aa11.1□□□□□ -0.63
Nup88-202ENSMUST00000108530 Gm12845A0A0N4SUM5 588 aa11.1□□□□□ -0.63
Nup88-202ENSMUST00000108530 Gm13030A2APQ6 143 aa11.1□□□□□ -0.63
Nup88-202ENSMUST00000108530 Tmem140Q8BGY5 185 aa11.1□□□□□ -0.63
Nup88-202ENSMUST00000108530 Ighv1-50A0A075B5W1 117 aa11.09□□□□□ -0.63
Nup88-202ENSMUST00000108530 Gm20379A0A087WR34 119 aa11.09□□□□□ -0.63
Nup88-202ENSMUST00000108530 Trav19A0A0B4J1K4 119 aa11.09□□□□□ -0.63
Nup88-202ENSMUST00000108530 P01791 123 aa11.09□□□□□ -0.63
Nup88-202ENSMUST00000108530 Olfr1431Q8VF59 312 aa11.09□□□□□ -0.63
Nup88-202ENSMUST00000108530 Igfn1Q3KNY0 2849 aa11.09□□□□□ -0.63
Nup88-202ENSMUST00000108530 Olfr1437Q7TQR7 312 aa11.09□□□□□ -0.63
Nup88-202ENSMUST00000108530 Mrpl20Q9CQL4 149 aa11.09□□□□□ -0.63
Nup88-202ENSMUST00000108530 Krtap26-1Q9D7N2 215 aa11.09□□□□□ -0.63
Nup88-202ENSMUST00000108530 Hspg2Q05793 3707 aaKnown RBP11.08□□□□□ -0.64
Nup88-202ENSMUST00000108530 Cd24P24807 76 aa11.08□□□□□ -0.64
Nup88-202ENSMUST00000108530 Olfr312Q7TRZ9 308 aa11.08□□□□□ -0.64
Nup88-202ENSMUST00000108530 CicQ924A2 2510 aa11.08□□□□□ -0.64
Nup88-202ENSMUST00000108530 Isg15Q64339 161 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms