RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 ZCCHC13Q8WW36 166 aaKnown RBP2.22□□□□□ -2.05
GABRA1-220ENST00000638159 CYSTM1Q9H1C7 97 aa2.22□□□□□ -2.05
GABRA1-220ENST00000638159 NDUFC1O43677 76 aa2.21□□□□□ -2.06
GABRA1-220ENST00000638159 RPS28P62857 69 aaKnown RBP2.21□□□□□ -2.06
GABRA1-220ENST00000638159 SNURFQ9Y675 71 aa2.21□□□□□ -2.06
GABRA1-220ENST00000638159 MACF1Q9UPN3 7388 aaKnown RBP2.21□□□□□ -2.06
GABRA1-220ENST00000638159 K7EQZ3 153 aa2.21□□□□□ -2.06
GABRA1-220ENST00000638159 C4orf26Q17RF5 130 aa2.21□□□□□ -2.06
GABRA1-220ENST00000638159 SPRR2FQ96RM1 72 aa2.2□□□□□ -2.06
GABRA1-220ENST00000638159 KRTAP4-9Q9BYQ8 210 aa2.2□□□□□ -2.06
GABRA1-220ENST00000638159 MP68P56378 58 aa2.2□□□□□ -2.06
GABRA1-220ENST00000638159 ELOF1P60002 83 aaKnown RBP2.2□□□□□ -2.06
GABRA1-220ENST00000638159 S4R3F8 94 aa2.2□□□□□ -2.06
GABRA1-220ENST00000638159 Q5XG85 94 aa2.19□□□□□ -2.06
GABRA1-220ENST00000638159 CAMK2N1Q7Z7J9 78 aa2.19□□□□□ -2.06
GABRA1-220ENST00000638159 KRTAP9-8Q9BYQ0 159 aa2.19□□□□□ -2.06
GABRA1-220ENST00000638159 TRAV7A0A075B6U4 112 aa2.19□□□□□ -2.06
GABRA1-220ENST00000638159 FAT4Q6V0I7 4981 aa2.18□□□□□ -2.06
GABRA1-220ENST00000638159 A8MUN3 132 aa2.18□□□□□ -2.06
GABRA1-220ENST00000638159 LRP1Q07954 4544 aaKnown RBP2.18□□□□□ -2.06
GABRA1-220ENST00000638159 TRBV7-4A0A0J9YYF1 115 aa2.18□□□□□ -2.06
GABRA1-220ENST00000638159 SPRR2DP22532 72 aa2.18□□□□□ -2.06
GABRA1-220ENST00000638159 BRK1Q8WUW1 75 aa2.18□□□□□ -2.06
GABRA1-220ENST00000638159 SERP1Q9Y6X1 66 aa2.18□□□□□ -2.06
GABRA1-220ENST00000638159 R4GN34 69 aa2.18□□□□□ -2.06
GABRA1-220ENST00000638159 HCG22E2RYF7 251 aa2.17□□□□□ -2.06
GABRA1-220ENST00000638159 MPLKIPQ8TAP9 179 aa2.17□□□□□ -2.06
GABRA1-220ENST00000638159 DEFB116Q30KQ4 102 aa2.17□□□□□ -2.06
GABRA1-220ENST00000638159 Q6ZQT0 140 aa2.17□□□□□ -2.06
GABRA1-220ENST00000638159 KRTAP8-1Q8IUC2 63 aa2.17□□□□□ -2.06
GABRA1-220ENST00000638159 SMIM26A0A096LP01 95 aa2.17□□□□□ -2.06
GABRA1-220ENST00000638159 Q8N9L7 120 aa2.17□□□□□ -2.06
GABRA1-220ENST00000638159 SPTSSBQ8NFR3 76 aa2.17□□□□□ -2.06
GABRA1-220ENST00000638159 H7BZZ5 65 aa2.16□□□□□ -2.06
GABRA1-220ENST00000638159 ATP5EP56381 51 aaPredicted RBP2.16□□□□□ -2.06
GABRA1-220ENST00000638159 CXCL6P80162 114 aa2.16□□□□□ -2.06
GABRA1-220ENST00000638159 TMEM254Q8TBM7 123 aa2.16□□□□□ -2.06
GABRA1-220ENST00000638159 KRTAP2-2Q9BYT5 123 aa2.15□□□□□ -2.06
GABRA1-220ENST00000638159 KRTAP2-1Q9BYU5 128 aa2.15□□□□□ -2.06
GABRA1-220ENST00000638159 KLKP1Q107X0 134 aa2.15□□□□□ -2.07
GABRA1-220ENST00000638159 PRO0628Q9UI54 55 aa2.15□□□□□ -2.07
GABRA1-220ENST00000638159 A0A1B0GVX0 72 aa2.15□□□□□ -2.07
GABRA1-220ENST00000638159 CHKB-CPT1BH3BT56 60 aa2.14□□□□□ -2.07
GABRA1-220ENST00000638159 A8MUU9 505 aa2.13□□□□□ -2.07
GABRA1-220ENST00000638159 KRTAP4-1Q9BYQ7 146 aa2.13□□□□□ -2.07
GABRA1-220ENST00000638159 CRIPTQ9P021 101 aa2.13□□□□□ -2.07
GABRA1-220ENST00000638159 KRTAP9-3Q9BYQ3 159 aa2.12□□□□□ -2.07
GABRA1-220ENST00000638159 MT2AP02795 61 aa2.12□□□□□ -2.07
GABRA1-220ENST00000638159 SEC61GP60059 68 aa2.12□□□□□ -2.07
GABRA1-220ENST00000638159 C1orf64Q8NEQ6 169 aa2.11□□□□□ -2.07
GABRA1-220ENST00000638159 MRPL34Q9BQ48 92 aaKnown RBP2.11□□□□□ -2.07
GABRA1-220ENST00000638159 V9GYY9 64 aa2.11□□□□□ -2.07
GABRA1-220ENST00000638159 PSPHP1O15172 72 aa2.1□□□□□ -2.07
GABRA1-220ENST00000638159 LINC00208Q96KT6 92 aa2.1□□□□□ -2.07
GABRA1-220ENST00000638159 LCE5AQ5TCM9 118 aa2.1□□□□□ -2.07
GABRA1-220ENST00000638159 OCR1Q9BZK8 76 aa2.09□□□□□ -2.08
GABRA1-220ENST00000638159 C8orf17Q9NRJ1 99 aa2.09□□□□□ -2.08
GABRA1-220ENST00000638159 H0Y9P7 68 aa2.08□□□□□ -2.08
GABRA1-220ENST00000638159 KRTAP19-6Q3LI70 58 aa2.08□□□□□ -2.08
GABRA1-220ENST00000638159 M0QZ58 72 aa2.08□□□□□ -2.08
GABRA1-220ENST00000638159 LCE1DQ5T752 114 aa2.08□□□□□ -2.08
GABRA1-220ENST00000638159 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
GABRA1-220ENST00000638159 H3BPC8 53 aa2.07□□□□□ -2.08
GABRA1-220ENST00000638159 KRTAP15-1Q3LI76 137 aa2.07□□□□□ -2.08
GABRA1-220ENST00000638159 TP53AIP1Q9HCN2 124 aa2.07□□□□□ -2.08
GABRA1-220ENST00000638159 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
GABRA1-220ENST00000638159 PMAIP1Q13794 54 aa2.06□□□□□ -2.08
GABRA1-220ENST00000638159 TRAV22A0A0B4J277 110 aa2.05□□□□□ -2.08
GABRA1-220ENST00000638159 MT1FP04733 61 aa2.05□□□□□ -2.08
GABRA1-220ENST00000638159 PP632Q6XCG6 107 aa2.04□□□□□ -2.08
GABRA1-220ENST00000638159 PRR15LQ9BU68 103 aa2.04□□□□□ -2.08
GABRA1-220ENST00000638159 A6NED7 52 aa2.04□□□□□ -2.08
GABRA1-220ENST00000638159 KRTAP16-1A8MUX0 517 aa2.04□□□□□ -2.08
GABRA1-220ENST00000638159 KRTAP19-4Q3LI73 84 aa2.03□□□□□ -2.08
GABRA1-220ENST00000638159 LINC00472Q9H8W2 130 aa2.03□□□□□ -2.08
GABRA1-220ENST00000638159 ACYP2P14621 99 aa2.03□□□□□ -2.08
GABRA1-220ENST00000638159 Q1T7F1 81 aa2.03□□□□□ -2.08
GABRA1-220ENST00000638159 LCE3BQ5TA77 95 aa2.02□□□□□ -2.09
GABRA1-220ENST00000638159 MUC2Q02817 5179 aa2.02□□□□□ -2.09
GABRA1-220ENST00000638159 KMT2DO14686 5537 aa2.02□□□□□ -2.09
GABRA1-220ENST00000638159 LOC101927531A0A1B0GV80 90 aa2.01□□□□□ -2.09
GABRA1-220ENST00000638159 CYP4F30PQ9H0H9 118 aa2.01□□□□□ -2.09
GABRA1-220ENST00000638159 H0YAA0 97 aa2.01□□□□□ -2.09
GABRA1-220ENST00000638159 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
GABRA1-220ENST00000638159 KRTAP4-11Q9BYQ6 195 aa2□□□□□ -2.09
GABRA1-220ENST00000638159 COA5Q86WW8 74 aa2□□□□□ -2.09
GABRA1-220ENST00000638159 ADM2Q7Z4H4 148 aa1.99□□□□□ -2.09
GABRA1-220ENST00000638159 KRTAP19-2Q3LHN2 52 aa1.99□□□□□ -2.09
GABRA1-220ENST00000638159 USH2AO75445 5202 aa1.99□□□□□ -2.09
GABRA1-220ENST00000638159 SPANXA2-OT1Q8N9U9 137 aa1.99□□□□□ -2.09
GABRA1-220ENST00000638159 A8MU10 97 aa1.98□□□□□ -2.09
GABRA1-220ENST00000638159 K7ERS5 55 aa1.98□□□□□ -2.09
GABRA1-220ENST00000638159 KTN1-AS1Q86SY8 53 aa1.97□□□□□ -2.09
GABRA1-220ENST00000638159 NOTCH2NLQ7Z3S9 236 aa1.96□□□□□ -2.09
GABRA1-220ENST00000638159 SSPOA2VEC9 5147 aa1.96□□□□□ -2.1
GABRA1-220ENST00000638159 MMP24-AS1A0A0U1RRL7 71 aa1.96□□□□□ -2.1
GABRA1-220ENST00000638159 A0A1B0GU69 56 aa1.96□□□□□ -2.1
GABRA1-220ENST00000638159 CDC42SE1Q9NRR8 79 aa1.95□□□□□ -2.1
GABRA1-220ENST00000638159 SPINT4Q6UDR6 99 aa1.93□□□□□ -2.1
GABRA1-220ENST00000638159 KRTAP10-7P60409 375 aaPredicted RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms