RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 UBL5Q9BZL1 73 aa4.22□□□□□ -1.73
SMAD4-215ENST00000592911 NOTCH2NLQ7Z3S9 236 aa4.21□□□□□ -1.74
SMAD4-215ENST00000592911 PDE6GP18545 87 aa4.2□□□□□ -1.74
SMAD4-215ENST00000592911 LINC00313P59037 77 aa4.2□□□□□ -1.74
SMAD4-215ENST00000592911 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
SMAD4-215ENST00000592911 KRTAP16-1A8MUX0 517 aa4.19□□□□□ -1.74
SMAD4-215ENST00000592911 CXCL6P80162 114 aa4.18□□□□□ -1.74
SMAD4-215ENST00000592911 ORMDL1Q9P0S3 153 aa4.18□□□□□ -1.74
SMAD4-215ENST00000592911 A0A087WVE0 104 aa4.17□□□□□ -1.74
SMAD4-215ENST00000592911 TMEM256-PLSCR3K7ERE1 68 aa4.17□□□□□ -1.74
SMAD4-215ENST00000592911 C14orf132Q9NPU4 83 aa4.17□□□□□ -1.74
SMAD4-215ENST00000592911 A0A087WSZ3 146 aa4.16□□□□□ -1.74
SMAD4-215ENST00000592911 DSCR10P59022 87 aa4.16□□□□□ -1.74
SMAD4-215ENST00000592911 IGKV2D-30A0A075B6S6 120 aa4.15□□□□□ -1.75
SMAD4-215ENST00000592911 Q1T7F1 81 aa4.15□□□□□ -1.75
SMAD4-215ENST00000592911 LOC110117498A0A087WWA1 95 aa4.14□□□□□ -1.75
SMAD4-215ENST00000592911 FAM218AQ96MZ4 157 aa4.14□□□□□ -1.75
SMAD4-215ENST00000592911 NDUFS5O43920 106 aa4.13□□□□□ -1.75
SMAD4-215ENST00000592911 TRBV7-4A0A0J9YYF1 115 aa4.12□□□□□ -1.75
SMAD4-215ENST00000592911 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
SMAD4-215ENST00000592911 TMEM254Q8TBM7 123 aa4.11□□□□□ -1.75
SMAD4-215ENST00000592911 IGKV4-1P06312 121 aa4.1□□□□□ -1.75
SMAD4-215ENST00000592911 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
SMAD4-215ENST00000592911 SPINK7P58062 85 aa4.09□□□□□ -1.75
SMAD4-215ENST00000592911 NREPQ16612 68 aa4.09□□□□□ -1.75
SMAD4-215ENST00000592911 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
SMAD4-215ENST00000592911 ZCCHC13Q8WW36 166 aaKnown RBP4.09□□□□□ -1.75
SMAD4-215ENST00000592911 SNURFQ9Y675 71 aa4.09□□□□□ -1.75
SMAD4-215ENST00000592911 hDV103S1A0JD37 113 aa4.07□□□□□ -1.76
SMAD4-215ENST00000592911 A6NN06 94 aa4.07□□□□□ -1.76
SMAD4-215ENST00000592911 Q6ZQT0 140 aa4.07□□□□□ -1.76
SMAD4-215ENST00000592911 A0A1W2PNM2 257 aa4.06□□□□□ -1.76
SMAD4-215ENST00000592911 BPY2O14599 106 aa4.06□□□□□ -1.76
SMAD4-215ENST00000592911 Q6ZVQ6 151 aa4.06□□□□□ -1.76
SMAD4-215ENST00000592911 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
SMAD4-215ENST00000592911 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
SMAD4-215ENST00000592911 CYP4F30PQ9H0H9 118 aa4.05□□□□□ -1.76
SMAD4-215ENST00000592911 KMT2DO14686 5537 aa4.04□□□□□ -1.76
SMAD4-215ENST00000592911 IGHV6-1A0A0B4J1U7 121 aa4.04□□□□□ -1.76
SMAD4-215ENST00000592911 A0A1B0GVX0 72 aa4.04□□□□□ -1.76
SMAD4-215ENST00000592911 A0A1B0GW54 56 aa4.04□□□□□ -1.76
SMAD4-215ENST00000592911 NDUFB1O75438 58 aa4.04□□□□□ -1.76
SMAD4-215ENST00000592911 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
SMAD4-215ENST00000592911 WFDC13Q8IUB5 93 aa4.04□□□□□ -1.76
SMAD4-215ENST00000592911 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
SMAD4-215ENST00000592911 OCR1Q9BZK8 76 aa4.02□□□□□ -1.77
SMAD4-215ENST00000592911 H1FX-AS1Q4G0G2 97 aa4.01□□□□□ -1.77
SMAD4-215ENST00000592911 TRAV22A0A0B4J277 110 aa4□□□□□ -1.77
SMAD4-215ENST00000592911 LCA10Q71F78 164 aa3.99□□□□□ -1.77
SMAD4-215ENST00000592911 Q5VV11 94 aa3.98□□□□□ -1.77
SMAD4-215ENST00000592911 C7orf65Q6ZTY9 151 aa3.98□□□□□ -1.77
SMAD4-215ENST00000592911 C1orf64Q8NEQ6 169 aa3.98□□□□□ -1.77
SMAD4-215ENST00000592911 KRTAP10-5P60370 271 aa3.97□□□□□ -1.77
SMAD4-215ENST00000592911 H3BPC8 53 aa3.96□□□□□ -1.78
SMAD4-215ENST00000592911 KRTAP19-8Q3LI54 63 aa3.96□□□□□ -1.78
SMAD4-215ENST00000592911 SPANXA2-OT1Q8N9U9 137 aa3.96□□□□□ -1.78
SMAD4-215ENST00000592911 MT1BP07438 61 aa3.95□□□□□ -1.78
SMAD4-215ENST00000592911 DEFB116Q30KQ4 102 aa3.95□□□□□ -1.78
SMAD4-215ENST00000592911 SPRR2GQ9BYE4 73 aa3.95□□□□□ -1.78
SMAD4-215ENST00000592911 CHKB-CPT1BH3BT56 60 aa3.94□□□□□ -1.78
SMAD4-215ENST00000592911 PSPHP1O15172 72 aa3.94□□□□□ -1.78
SMAD4-215ENST00000592911 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
SMAD4-215ENST00000592911 LOC101927531A0A1B0GV80 90 aa3.93□□□□□ -1.78
SMAD4-215ENST00000592911 A8MUN3 132 aa3.92□□□□□ -1.78
SMAD4-215ENST00000592911 HCG22E2RYF7 251 aa3.92□□□□□ -1.78
SMAD4-215ENST00000592911 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
SMAD4-215ENST00000592911 MP68P56378 58 aa3.91□□□□□ -1.78
SMAD4-215ENST00000592911 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.79
SMAD4-215ENST00000592911 C8orf17Q9NRJ1 99 aa3.9□□□□□ -1.79
SMAD4-215ENST00000592911 A6NED7 52 aa3.89□□□□□ -1.79
SMAD4-215ENST00000592911 SPTSSBQ8NFR3 76 aa3.89□□□□□ -1.79
SMAD4-215ENST00000592911 LINC00208Q96KT6 92 aa3.89□□□□□ -1.79
SMAD4-215ENST00000592911 PRR15LQ9BU68 103 aa3.87□□□□□ -1.79
SMAD4-215ENST00000592911 CASC2Q6XLA1 102 aa3.85□□□□□ -1.79
SMAD4-215ENST00000592911 LINC01558Q9Y6Z2 57 aa3.85□□□□□ -1.79
SMAD4-215ENST00000592911 MRPL34Q9BQ48 92 aaKnown RBP3.84□□□□□ -1.79
SMAD4-215ENST00000592911 SPRR2EP22531 72 aa3.83□□□□□ -1.8
SMAD4-215ENST00000592911 SPRR2BP35325 72 aa3.83□□□□□ -1.8
SMAD4-215ENST00000592911 SPRR2AP35326 72 aa3.83□□□□□ -1.8
SMAD4-215ENST00000592911 LINC01554Q52M75 96 aa3.83□□□□□ -1.8
SMAD4-215ENST00000592911 CRIPTQ9P021 101 aa3.83□□□□□ -1.8
SMAD4-215ENST00000592911 CSAG1Q6PB30 78 aa3.82□□□□□ -1.8
SMAD4-215ENST00000592911 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
SMAD4-215ENST00000592911 Q8N9L7 120 aa3.81□□□□□ -1.8
SMAD4-215ENST00000592911 MMP24-AS1A0A0U1RRL7 71 aa3.78□□□□□ -1.8
SMAD4-215ENST00000592911 K7EQZ3 153 aa3.78□□□□□ -1.8
SMAD4-215ENST00000592911 COA5Q86WW8 74 aa3.78□□□□□ -1.8
SMAD4-215ENST00000592911 MT3P25713 68 aa3.77□□□□□ -1.81
SMAD4-215ENST00000592911 PRO2289Q9P1D8 64 aa3.77□□□□□ -1.81
SMAD4-215ENST00000592911 S4R3F8 94 aa3.77□□□□□ -1.81
SMAD4-215ENST00000592911 A8MU10 97 aa3.76□□□□□ -1.81
SMAD4-215ENST00000592911 H0Y9P7 68 aa3.76□□□□□ -1.81
SMAD4-215ENST00000592911 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
SMAD4-215ENST00000592911 TP53AIP1Q9HCN2 124 aa3.74□□□□□ -1.81
SMAD4-215ENST00000592911 SPRR2DP22532 72 aa3.72□□□□□ -1.81
SMAD4-215ENST00000592911 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
SMAD4-215ENST00000592911 KRTAP12-2P59991 146 aa3.71□□□□□ -1.82
SMAD4-215ENST00000592911 Q5W150 140 aa3.71□□□□□ -1.82
SMAD4-215ENST00000592911 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
SMAD4-215ENST00000592911 H0YAA0 97 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms