RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 C7orf65Q6ZTY9 151 aa11.67□□□□□ -0.54
CAPNS1-211ENST00000590874 UQCRQO14949 82 aa11.66□□□□□ -0.54
CAPNS1-211ENST00000590874 COX7CP15954 63 aa11.64□□□□□ -0.55
CAPNS1-211ENST00000590874 PCP4P48539 62 aa11.62□□□□□ -0.55
CAPNS1-211ENST00000590874 C4orf26Q17RF5 130 aa11.59□□□□□ -0.55
CAPNS1-211ENST00000590874 C5orf47Q569G3 176 aa11.58□□□□□ -0.56
CAPNS1-211ENST00000590874 Q5VV11 94 aa11.57□□□□□ -0.56
CAPNS1-211ENST00000590874 KRTAP20-1Q3LI63 56 aa11.56□□□□□ -0.56
CAPNS1-211ENST00000590874 TRAV22A0A0B4J277 110 aa11.54□□□□□ -0.56
CAPNS1-211ENST00000590874 MP68P56378 58 aa11.53□□□□□ -0.56
CAPNS1-211ENST00000590874 KRTAP19-8Q3LI54 63 aa11.53□□□□□ -0.56
CAPNS1-211ENST00000590874 H0Y9P7 68 aa11.51□□□□□ -0.57
CAPNS1-211ENST00000590874 H3BPC8 53 aa11.51□□□□□ -0.57
CAPNS1-211ENST00000590874 SPRR2GQ9BYE4 73 aa11.51□□□□□ -0.57
CAPNS1-211ENST00000590874 KRTAP10-5P60370 271 aa11.49□□□□□ -0.57
CAPNS1-211ENST00000590874 CCDC179H3BU77 68 aa11.46□□□□□ -0.57
CAPNS1-211ENST00000590874 C20orf197Q8N268 126 aa11.46□□□□□ -0.57
CAPNS1-211ENST00000590874 KRTAP5-9P26371 169 aa11.44□□□□□ -0.58
CAPNS1-211ENST00000590874 KLKP1Q107X0 134 aa11.44□□□□□ -0.58
CAPNS1-211ENST00000590874 KRTAP3-1Q9BYR8 98 aa11.44□□□□□ -0.58
CAPNS1-211ENST00000590874 S4R3F8 94 aa11.41□□□□□ -0.58
CAPNS1-211ENST00000590874 LINC00208Q96KT6 92 aa11.4□□□□□ -0.58
CAPNS1-211ENST00000590874 LOC101927531A0A1B0GV80 90 aa11.38□□□□□ -0.59
CAPNS1-211ENST00000590874 CSAG1Q6PB30 78 aa11.37□□□□□ -0.59
CAPNS1-211ENST00000590874 C1orf64Q8NEQ6 169 aa11.37□□□□□ -0.59
CAPNS1-211ENST00000590874 KMT2DO14686 5537 aa11.36□□□□□ -0.59
CAPNS1-211ENST00000590874 SNURFQ9Y675 71 aa11.36□□□□□ -0.59
CAPNS1-211ENST00000590874 LCA10Q71F78 164 aa11.35□□□□□ -0.59
CAPNS1-211ENST00000590874 NDUFC1O43677 76 aa11.34□□□□□ -0.59
CAPNS1-211ENST00000590874 MDN1Q9NU22 5596 aa11.34□□□□□ -0.59
CAPNS1-211ENST00000590874 CYP4F30PQ9H0H9 118 aa11.25□□□□□ -0.61
CAPNS1-211ENST00000590874 CYSTM1Q9H1C7 97 aa11.24□□□□□ -0.61
CAPNS1-211ENST00000590874 H7BZZ5 65 aa11.22□□□□□ -0.61
CAPNS1-211ENST00000590874 KRTAP3-3Q9BYR6 98 aa11.16□□□□□ -0.62
CAPNS1-211ENST00000590874 TMEM258P61165 79 aa11.15□□□□□ -0.62
CAPNS1-211ENST00000590874 SPANXA2-OT1Q8N9U9 137 aa11.12□□□□□ -0.63
CAPNS1-211ENST00000590874 KRTAP2-3P0C7H8 128 aa11.1□□□□□ -0.63
CAPNS1-211ENST00000590874 KRTAP2-4Q9BYR9 128 aa11.1□□□□□ -0.63
CAPNS1-211ENST00000590874 ATP5EP56381 51 aaPredicted RBP11.09□□□□□ -0.63
CAPNS1-211ENST00000590874 CRIPTQ9P021 101 aa11.05□□□□□ -0.64
CAPNS1-211ENST00000590874 SPRR2FQ96RM1 72 aa10.97□□□□□ -0.65
CAPNS1-211ENST00000590874 SPRR2EP22531 72 aa10.94□□□□□ -0.66
CAPNS1-211ENST00000590874 SPRR2BP35325 72 aa10.94□□□□□ -0.66
CAPNS1-211ENST00000590874 SPRR2AP35326 72 aa10.94□□□□□ -0.66
CAPNS1-211ENST00000590874 DMAC1Q96GE9 116 aa10.91□□□□□ -0.66
CAPNS1-211ENST00000590874 A8MUN3 132 aa10.9□□□□□ -0.66
CAPNS1-211ENST00000590874 ACYP2P14621 99 aa10.83□□□□□ -0.68
CAPNS1-211ENST00000590874 MT1XP80297 61 aa10.8□□□□□ -0.68
CAPNS1-211ENST00000590874 SERP1Q9Y6X1 66 aa10.79□□□□□ -0.68
CAPNS1-211ENST00000590874 H0YAA0 97 aa10.77□□□□□ -0.69
CAPNS1-211ENST00000590874 PRO2289Q9P1D8 64 aa10.77□□□□□ -0.69
CAPNS1-211ENST00000590874 KRTAP8-1Q8IUC2 63 aa10.75□□□□□ -0.69
CAPNS1-211ENST00000590874 LCE1AQ5T7P2 110 aa10.74□□□□□ -0.69
CAPNS1-211ENST00000590874 COA5Q86WW8 74 aa10.72□□□□□ -0.69
CAPNS1-211ENST00000590874 KRTAP2-2Q9BYT5 123 aa10.72□□□□□ -0.69
CAPNS1-211ENST00000590874 KRTAP2-1Q9BYU5 128 aa10.72□□□□□ -0.69
CAPNS1-211ENST00000590874 RPS28P62857 69 aaKnown RBP10.7□□□□□ -0.7
CAPNS1-211ENST00000590874 ADM2Q7Z4H4 148 aa10.68□□□□□ -0.7
CAPNS1-211ENST00000590874 CHKB-CPT1BH3BT56 60 aa10.64□□□□□ -0.71
CAPNS1-211ENST00000590874 KRTAP12-2P59991 146 aa10.6□□□□□ -0.71
CAPNS1-211ENST00000590874 PLAC4Q8WY50 150 aa10.6□□□□□ -0.71
CAPNS1-211ENST00000590874 SPRR2DP22532 72 aa10.58□□□□□ -0.72
CAPNS1-211ENST00000590874 KRTAP4-8A0A0G2JLE6 195 aa10.53□□□□□ -0.72
CAPNS1-211ENST00000590874 SPTSSBQ8NFR3 76 aa10.53□□□□□ -0.72
CAPNS1-211ENST00000590874 KRTAP4-8Q9BYQ9 185 aa10.53□□□□□ -0.72
CAPNS1-211ENST00000590874 SMIM26A0A096LP01 95 aa10.49□□□□□ -0.73
CAPNS1-211ENST00000590874 R4GN34 69 aa10.42□□□□□ -0.74
CAPNS1-211ENST00000590874 P0C880 135 aa10.38□□□□□ -0.75
CAPNS1-211ENST00000590874 V9GYY9 64 aa10.36□□□□□ -0.75
CAPNS1-211ENST00000590874 LCE3BQ5TA77 95 aa10.34□□□□□ -0.75
CAPNS1-211ENST00000590874 M0QZ58 72 aa10.33□□□□□ -0.76
CAPNS1-211ENST00000590874 KRTAP10-7P60409 375 aaPredicted RBP10.31□□□□□ -0.76
CAPNS1-211ENST00000590874 Q1T7F1 81 aa10.31□□□□□ -0.76
CAPNS1-211ENST00000590874 LINC01558Q9Y6Z2 57 aa10.28□□□□□ -0.76
CAPNS1-211ENST00000590874 KRTAP10-12P60413 245 aa10.23□□□□□ -0.77
CAPNS1-211ENST00000590874 LINC01554Q52M75 96 aa10.23□□□□□ -0.77
CAPNS1-211ENST00000590874 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
CAPNS1-211ENST00000590874 SEC61GP60059 68 aa10.17□□□□□ -0.78
CAPNS1-211ENST00000590874 PRR15LQ9BU68 103 aa10.17□□□□□ -0.78
CAPNS1-211ENST00000590874 A0A1B0GU69 56 aa10.16□□□□□ -0.78
CAPNS1-211ENST00000590874 PSPHP1O15172 72 aa10.04□□□□□ -0.8
CAPNS1-211ENST00000590874 GPR98Q8WXG9 6306 aa10.01□□□□□ -0.81
CAPNS1-211ENST00000590874 DSTQ03001 7570 aaKnown RBP9.92□□□□□ -0.82
CAPNS1-211ENST00000590874 A0A1B0GU33 70 aa9.88□□□□□ -0.83
CAPNS1-211ENST00000590874 UQCR11O14957 56 aa9.84□□□□□ -0.83
CAPNS1-211ENST00000590874 A6NED7 52 aa9.8□□□□□ -0.84
CAPNS1-211ENST00000590874 KRTAP4-9Q9BYQ8 210 aa9.79□□□□□ -0.84
CAPNS1-211ENST00000590874 LCE5AQ5TCM9 118 aa9.73□□□□□ -0.85
CAPNS1-211ENST00000590874 MIR22HGQ0VDD5 57 aa9.7□□□□□ -0.86
CAPNS1-211ENST00000590874 KRTAP19-7Q3SYF9 63 aa9.67□□□□□ -0.86
CAPNS1-211ENST00000590874 SPATA8Q6RVD6 105 aa9.67□□□□□ -0.86
CAPNS1-211ENST00000590874 KRTAP13-4Q3LI77 160 aa9.64□□□□□ -0.87
CAPNS1-211ENST00000590874 CDC42SE1Q9NRR8 79 aa9.64□□□□□ -0.87
CAPNS1-211ENST00000590874 KRTAP19-3Q7Z4W3 81 aa9.62□□□□□ -0.87
CAPNS1-211ENST00000590874 MT1EP04732 61 aa9.6□□□□□ -0.87
CAPNS1-211ENST00000590874 BRK1Q8WUW1 75 aa9.57□□□□□ -0.88
CAPNS1-211ENST00000590874 LCE1DQ5T752 114 aa9.5□□□□□ -0.89
CAPNS1-211ENST00000590874 CAMK2N1Q7Z7J9 78 aa9.49□□□□□ -0.89
CAPNS1-211ENST00000590874 A8MU10 97 aa9.48□□□□□ -0.89
CAPNS1-211ENST00000590874 A0A0D9SG42 100 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms