RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 SSPOA2VEC9 5147 aa1.93□□□□□ -2.1
VMP1-205ENST00000587470 LOC110117498A0A087WWA1 95 aa1.93□□□□□ -2.1
VMP1-205ENST00000587470 A0A1B0GU33 70 aa1.93□□□□□ -2.1
VMP1-205ENST00000587470 A0A1B0GV72 72 aa1.93□□□□□ -2.1
VMP1-205ENST00000587470 C9orf92A6NGG3 77 aa1.93□□□□□ -2.1
VMP1-205ENST00000587470 CCKP06307 115 aa1.93□□□□□ -2.1
VMP1-205ENST00000587470 LYRM7Q5U5X0 104 aa1.93□□□□□ -2.1
VMP1-205ENST00000587470 Q6ZQT0 140 aa1.93□□□□□ -2.1
VMP1-205ENST00000587470 JMJD7-PLA2G4BH0Y9G9 81 aa1.92□□□□□ -2.1
VMP1-205ENST00000587470 H3BT86 120 aa1.92□□□□□ -2.1
VMP1-205ENST00000587470 MT1HP80294 61 aa1.92□□□□□ -2.1
VMP1-205ENST00000587470 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
VMP1-205ENST00000587470 DSCR8Q96T75 97 aa1.92□□□□□ -2.1
VMP1-205ENST00000587470 LINC00846Q9NV44 126 aa1.92□□□□□ -2.1
VMP1-205ENST00000587470 SS18L2Q9UHA2 77 aa1.92□□□□□ -2.1
VMP1-205ENST00000587470 SPCS1Q9Y6A9 102 aa1.92□□□□□ -2.1
VMP1-205ENST00000587470 R4GN34 69 aa1.92□□□□□ -2.1
VMP1-205ENST00000587470 A0A1B0GW54 56 aa1.91□□□□□ -2.1
VMP1-205ENST00000587470 PDE6GP18545 87 aa1.91□□□□□ -2.1
VMP1-205ENST00000587470 KRTAP19-2Q3LHN2 52 aa1.91□□□□□ -2.1
VMP1-205ENST00000587470 C14orf132Q9NPU4 83 aa1.91□□□□□ -2.1
VMP1-205ENST00000587470 K7EP34 96 aa1.9□□□□□ -2.11
VMP1-205ENST00000587470 M0R2T5 61 aa1.9□□□□□ -2.11
VMP1-205ENST00000587470 HRES1P13985 223 aa1.9□□□□□ -2.11
VMP1-205ENST00000587470 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
VMP1-205ENST00000587470 RPL37P61927 97 aaKnown RBP1.9□□□□□ -2.11
VMP1-205ENST00000587470 PCOTHQ58A44 107 aa1.9□□□□□ -2.11
VMP1-205ENST00000587470 C20orf166-AS1Q96NR2 134 aa1.9□□□□□ -2.11
VMP1-205ENST00000587470 MACF1Q9UPN3 7388 aaKnown RBP1.9□□□□□ -2.11
VMP1-205ENST00000587470 SYNE2Q8WXH0 6885 aaKnown RBP1.9□□□□□ -2.11
VMP1-205ENST00000587470 FCGBPQ9Y6R7 5405 aaPredicted RBP1.89□□□□□ -2.11
VMP1-205ENST00000587470 PMAIP1Q13794 54 aa1.89□□□□□ -2.11
VMP1-205ENST00000587470 VPS25Q9BRG1 176 aa1.89□□□□□ -2.11
VMP1-205ENST00000587470 IGKV3D-7A0A0C4DH55 119 aa1.87□□□□□ -2.11
VMP1-205ENST00000587470 F8W1H4 67 aa1.87□□□□□ -2.11
VMP1-205ENST00000587470 J3KT08 172 aa1.87□□□□□ -2.11
VMP1-205ENST00000587470 NREPQ16612 68 aa1.87□□□□□ -2.11
VMP1-205ENST00000587470 GTF2H5Q6ZYL4 71 aa1.87□□□□□ -2.11
VMP1-205ENST00000587470 SIGMAR1Q99720 223 aa1.87□□□□□ -2.11
VMP1-205ENST00000587470 ETDBQ3ZM63 59 aa1.86□□□□□ -2.11
VMP1-205ENST00000587470 PRR15Q8IV56 129 aa1.86□□□□□ -2.11
VMP1-205ENST00000587470 USH2AO75445 5202 aa1.85□□□□□ -2.11
VMP1-205ENST00000587470 A8MUN3 132 aa1.85□□□□□ -2.11
VMP1-205ENST00000587470 ATP11AUNQ6ZP68 121 aa1.85□□□□□ -2.11
VMP1-205ENST00000587470 FLGP20930 4061 aaPredicted RBP1.85□□□□□ -2.11
VMP1-205ENST00000587470 MMP24-AS1A0A0U1RRL7 71 aa1.84□□□□□ -2.11
VMP1-205ENST00000587470 A0A1B0GV90 55 aa1.84□□□□□ -2.11
VMP1-205ENST00000587470 K7EQZ3 153 aa1.84□□□□□ -2.11
VMP1-205ENST00000587470 NDUFB1O75438 58 aa1.84□□□□□ -2.11
VMP1-205ENST00000587470 KRTAP2-3P0C7H8 128 aa1.83□□□□□ -2.12
VMP1-205ENST00000587470 KRTAP2-4Q9BYR9 128 aa1.83□□□□□ -2.12
VMP1-205ENST00000587470 NEBP20929 6669 aa1.82□□□□□ -2.12
VMP1-205ENST00000587470 hDV103S1A0JD37 113 aa1.82□□□□□ -2.12
VMP1-205ENST00000587470 TMEM254Q8TBM7 123 aa1.82□□□□□ -2.12
VMP1-205ENST00000587470 ZCCHC13Q8WW36 166 aaKnown RBP1.82□□□□□ -2.12
VMP1-205ENST00000587470 MRPL34Q9BQ48 92 aaKnown RBP1.82□□□□□ -2.12
VMP1-205ENST00000587470 UBL5Q9BZL1 73 aa1.82□□□□□ -2.12
VMP1-205ENST00000587470 FAM236DA0A1B0GTK5 79 aa1.8□□□□□ -2.12
VMP1-205ENST00000587470 H3BPC8 53 aa1.8□□□□□ -2.12
VMP1-205ENST00000587470 ACYP1P07311 99 aa1.8□□□□□ -2.12
VMP1-205ENST00000587470 P0C880 135 aa1.8□□□□□ -2.12
VMP1-205ENST00000587470 FAM236CP0DP71 79 aa1.8□□□□□ -2.12
VMP1-205ENST00000587470 SPINK7P58062 85 aa1.8□□□□□ -2.12
VMP1-205ENST00000587470 COX6B2Q6YFQ2 88 aa1.8□□□□□ -2.12
VMP1-205ENST00000587470 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
VMP1-205ENST00000587470 CASC2Q6XLA1 102 aa1.79□□□□□ -2.12
VMP1-205ENST00000587470 WFDC13Q8IUB5 93 aa1.79□□□□□ -2.12
VMP1-205ENST00000587470 HCG22E2RYF7 251 aa1.78□□□□□ -2.12
VMP1-205ENST00000587470 LINC00643Q86TS7 51 aa1.77□□□□□ -2.13
VMP1-205ENST00000587470 ATP5EP2Q5VTU8 51 aa1.76□□□□□ -2.13
VMP1-205ENST00000587470 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
VMP1-205ENST00000587470 TP53AIP1Q9HCN2 124 aa1.75□□□□□ -2.13
VMP1-205ENST00000587470 A0A087WVE0 104 aa1.74□□□□□ -2.13
VMP1-205ENST00000587470 HIST1H4AP62805 103 aaKnown RBP1.74□□□□□ -2.13
VMP1-205ENST00000587470 C7orf65Q6ZTY9 151 aa1.74□□□□□ -2.13
VMP1-205ENST00000587470 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
VMP1-205ENST00000587470 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
VMP1-205ENST00000587470 J3QR89 54 aa1.73□□□□□ -2.13
VMP1-205ENST00000587470 MT2AP02795 61 aa1.73□□□□□ -2.13
VMP1-205ENST00000587470 H1FX-AS1Q4G0G2 97 aa1.73□□□□□ -2.13
VMP1-205ENST00000587470 CYP4F30PQ9H0H9 118 aa1.73□□□□□ -2.13
VMP1-205ENST00000587470 KMT2DO14686 5537 aa1.73□□□□□ -2.13
VMP1-205ENST00000587470 K7ERU9 68 aa1.72□□□□□ -2.13
VMP1-205ENST00000587470 UQCRQO14949 82 aa1.72□□□□□ -2.13
VMP1-205ENST00000587470 MT1FP04733 61 aa1.72□□□□□ -2.13
VMP1-205ENST00000587470 TRAV22A0A0B4J277 110 aa1.71□□□□□ -2.14
VMP1-205ENST00000587470 MT-ATP8P03928 68 aa1.71□□□□□ -2.14
VMP1-205ENST00000587470 IMUPQ9GZP8 106 aa1.71□□□□□ -2.14
VMP1-205ENST00000587470 TRAV7A0A075B6U4 112 aa1.7□□□□□ -2.14
VMP1-205ENST00000587470 LOC101927531A0A1B0GV80 90 aa1.7□□□□□ -2.14
VMP1-205ENST00000587470 H0Y9P7 68 aa1.7□□□□□ -2.14
VMP1-205ENST00000587470 SCGB1A1P11684 91 aa1.7□□□□□ -2.14
VMP1-205ENST00000587470 PRO2289Q9P1D8 64 aa1.7□□□□□ -2.14
VMP1-205ENST00000587470 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
VMP1-205ENST00000587470 ATOX1O00244 68 aa1.68□□□□□ -2.14
VMP1-205ENST00000587470 KLKP1Q107X0 134 aa1.68□□□□□ -2.14
VMP1-205ENST00000587470 LINC00208Q96KT6 92 aa1.68□□□□□ -2.14
VMP1-205ENST00000587470 LCA10Q71F78 164 aa1.67□□□□□ -2.14
VMP1-205ENST00000587470 FAM236AA0A1B0GUQ0 79 aa1.66□□□□□ -2.14
VMP1-205ENST00000587470 FAM236BA0A1B0GV22 79 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms