RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TMEM141Q96I45 108 aa0.67□□□□□ -2.3
SMCHD1-205ENST00000581383 FLGP20930 4061 aaPredicted RBP0.67□□□□□ -2.3
SMCHD1-205ENST00000581383 IGIPA6NJ69 53 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 SMIM13P0DJ93 91 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 KRTAP20-1Q3LI63 56 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 MEIG1Q5JSS6 88 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 TMEM170BQ5T4T1 132 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 Q8IZM0 81 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 Q8N8P6 123 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 SPRR4Q96PI1 79 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 AMELXQ99217 191 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 PMCHL2Q9BQD1 86 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 C20orf78Q9BR46 151 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 MUC12Q9UKN1 5478 aa0.66□□□□□ -2.3
SMCHD1-205ENST00000581383 TRBV10-3A0A0K0K1G6 114 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 TEX49A0A1B0GTD5 131 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 ETDCA0A1B0GVM5 59 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 CCDC179H3BU77 68 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 M0R2T5 61 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 PPP1R17O96001 155 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 S100A8P05109 93 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 IGLC3P0DOY3 106 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 LINC00158P58513 81 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 KLKP1Q107X0 134 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 PEA15Q15121 130 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 COX6B2Q6YFQ2 88 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 SMCO4Q9NRQ5 59 aa0.65□□□□□ -2.31
SMCHD1-205ENST00000581383 K7EMI3 77 aa0.64□□□□□ -2.31
SMCHD1-205ENST00000581383 RPL37P61927 97 aaKnown RBP0.64□□□□□ -2.31
SMCHD1-205ENST00000581383 BAGE3Q86Y29 109 aa0.64□□□□□ -2.31
SMCHD1-205ENST00000581383 DEFB105AQ8NG35 78 aa0.64□□□□□ -2.31
SMCHD1-205ENST00000581383 C18orf32Q8TCD1 76 aa0.64□□□□□ -2.31
SMCHD1-205ENST00000581383 NXT2Q9NPJ8 142 aaKnown RBP0.64□□□□□ -2.31
SMCHD1-205ENST00000581383 TMEM218A2RU14 115 aa0.63□□□□□ -2.31
SMCHD1-205ENST00000581383 MT2AP02795 61 aa0.63□□□□□ -2.31
SMCHD1-205ENST00000581383 MT1FP04733 61 aa0.63□□□□□ -2.31
SMCHD1-205ENST00000581383 S100PP25815 95 aa0.63□□□□□ -2.31
SMCHD1-205ENST00000581383 SPRR1AP35321 89 aa0.63□□□□□ -2.31
SMCHD1-205ENST00000581383 ELOF1P60002 83 aaKnown RBP0.63□□□□□ -2.31
SMCHD1-205ENST00000581383 SEC11AP67812 179 aa0.63□□□□□ -2.31
SMCHD1-205ENST00000581383 S100A7L2Q5SY68 101 aa0.63□□□□□ -2.31
SMCHD1-205ENST00000581383 Q6ZRX8 168 aa0.63□□□□□ -2.31
SMCHD1-205ENST00000581383 C12orf57Q99622 126 aa0.63□□□□□ -2.31
SMCHD1-205ENST00000581383 LINC01546A6NGU7 62 aa0.62□□□□□ -2.31
SMCHD1-205ENST00000581383 H3BUT2 72 aa0.62□□□□□ -2.31
SMCHD1-205ENST00000581383 SPINK1P00995 79 aa0.62□□□□□ -2.31
SMCHD1-205ENST00000581383 APOC3P02656 99 aa0.62□□□□□ -2.31
SMCHD1-205ENST00000581383 SPAG11AQ6PDA7 123 aa0.62□□□□□ -2.31
SMCHD1-205ENST00000581383 C20orf197Q8N268 126 aa0.62□□□□□ -2.31
SMCHD1-205ENST00000581383 SEC11CQ9BY50 192 aa0.62□□□□□ -2.31
SMCHD1-205ENST00000581383 KCNQ1DNQ9H478 68 aa0.62□□□□□ -2.31
SMCHD1-205ENST00000581383 MYMXA0A1B0GTQ4 84 aa0.61□□□□□ -2.31
SMCHD1-205ENST00000581383 ZNF815PA8K554 130 aa0.61□□□□□ -2.31
SMCHD1-205ENST00000581383 SNCGO76070 127 aa0.61□□□□□ -2.31
SMCHD1-205ENST00000581383 COX7BP24311 80 aa0.61□□□□□ -2.31
SMCHD1-205ENST00000581383 COX17Q14061 63 aa0.61□□□□□ -2.31
SMCHD1-205ENST00000581383 SPTSSBQ8NFR3 76 aa0.61□□□□□ -2.31
SMCHD1-205ENST00000581383 LINC00308Q8TCZ7 52 aa0.61□□□□□ -2.31
SMCHD1-205ENST00000581383 DSCR8Q96T75 97 aa0.61□□□□□ -2.31
SMCHD1-205ENST00000581383 F8WEM9 126 aa0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 LEPROTL1O95214 131 aa0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 SPRR1BP22528 89 aa0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 PLNP26678 52 aa0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 SPINK7P58062 85 aa0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 KRTDAPP60985 99 aa0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 RPS29P62273 56 aaKnown RBP0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 SSBP3-AS1Q7Z2R9 100 aa0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 SMIM11BQ8TCY0 68 aa0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 Q96NJ1 140 aa0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 SPANXDQ9BXN6 97 aa0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 PRO1933Q9H354 126 aa0.6□□□□□ -2.31
SMCHD1-205ENST00000581383 IGLV5-48A0A075B6I7 105 aa0.59□□□□□ -2.31
SMCHD1-205ENST00000581383 TRBV7-7A0A0K0K1E9 115 aa0.59□□□□□ -2.31
SMCHD1-205ENST00000581383 C20orf202A1L168 122 aa0.59□□□□□ -2.31
SMCHD1-205ENST00000581383 SYS1-DBNDD2H3BUS1 97 aa0.59□□□□□ -2.31
SMCHD1-205ENST00000581383 C3orf79P0CE67 100 aa0.59□□□□□ -2.31
SMCHD1-205ENST00000581383 RBM3P98179 157 aaKnown RBP0.59□□□□□ -2.31
SMCHD1-205ENST00000581383 SFTA2Q6UW10 78 aa0.59□□□□□ -2.31
SMCHD1-205ENST00000581383 MUSTN1Q8IVN3 82 aa0.59□□□□□ -2.31
SMCHD1-205ENST00000581383 SVBPQ8N300 66 aa0.59□□□□□ -2.31
SMCHD1-205ENST00000581383 hADV29S1A0JD25 119 aa0.58□□□□□ -2.32
SMCHD1-205ENST00000581383 LINC01549A6NIU2 74 aa0.58□□□□□ -2.32
SMCHD1-205ENST00000581383 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
SMCHD1-205ENST00000581383 WFDC13Q8IUB5 93 aa0.58□□□□□ -2.32
SMCHD1-205ENST00000581383 A0A1B0GV90 55 aa0.57□□□□□ -2.32
SMCHD1-205ENST00000581383 LINC00587B1AMM8 73 aa0.57□□□□□ -2.32
SMCHD1-205ENST00000581383 KRTAP19-6Q3LI70 58 aa0.57□□□□□ -2.32
SMCHD1-205ENST00000581383 TRAV13-2A0A0B4J235 113 aa0.56□□□□□ -2.32
SMCHD1-205ENST00000581383 MT1BP07438 61 aa0.56□□□□□ -2.32
SMCHD1-205ENST00000581383 Q6JHZ5 121 aa0.56□□□□□ -2.32
SMCHD1-205ENST00000581383 C14orf144Q96I85 54 aa0.56□□□□□ -2.32
SMCHD1-205ENST00000581383 SNHG12Q9BXW3 62 aa0.56□□□□□ -2.32
SMCHD1-205ENST00000581383 LINC00846Q9NV44 126 aa0.56□□□□□ -2.32
SMCHD1-205ENST00000581383 KRTAP2-3P0C7H8 128 aa0.55□□□□□ -2.32
SMCHD1-205ENST00000581383 IFITM1P13164 125 aa0.55□□□□□ -2.32
SMCHD1-205ENST00000581383 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
SMCHD1-205ENST00000581383 A0A087WVE0 104 aa0.54□□□□□ -2.32
SMCHD1-205ENST00000581383 MMP24-AS1A0A0U1RRL7 71 aa0.54□□□□□ -2.32
SMCHD1-205ENST00000581383 K7EQZ3 153 aa0.54□□□□□ -2.32
SMCHD1-205ENST00000581383 COX8AP10176 69 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms