RNA–Protein interactions for RNA: ENST00000581104.5

NUP85-216, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 2,233 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-216ENST00000581104 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
NUP85-216ENST00000581104 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
NUP85-216ENST00000581104 H3BPC8 53 aa5.06□□□□□ -1.6
NUP85-216ENST00000581104 A8MUU9 505 aa5.05□□□□□ -1.6
NUP85-216ENST00000581104 PCOTHQ58A44 107 aa5.05□□□□□ -1.6
NUP85-216ENST00000581104 TP53AIP1Q9HCN2 124 aa5.05□□□□□ -1.6
NUP85-216ENST00000581104 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
NUP85-216ENST00000581104 H0Y9P7 68 aa5.04□□□□□ -1.6
NUP85-216ENST00000581104 ROMO1P60602 79 aa5.02□□□□□ -1.61
NUP85-216ENST00000581104 ADM2Q7Z4H4 148 aa5.01□□□□□ -1.61
NUP85-216ENST00000581104 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
NUP85-216ENST00000581104 KRTAP4-1Q9BYQ7 146 aa4.97□□□□□ -1.61
NUP85-216ENST00000581104 SPINK7P58062 85 aa4.96□□□□□ -1.62
NUP85-216ENST00000581104 CSAG1Q6PB30 78 aa4.96□□□□□ -1.62
NUP85-216ENST00000581104 RNF213Q63HN8 5207 aa4.94□□□□□ -1.62
NUP85-216ENST00000581104 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
NUP85-216ENST00000581104 IGKV2-30P06310 120 aa4.93□□□□□ -1.62
NUP85-216ENST00000581104 COA5Q86WW8 74 aa4.93□□□□□ -1.62
NUP85-216ENST00000581104 MIR22HGQ0VDD5 57 aa4.91□□□□□ -1.62
NUP85-216ENST00000581104 MUC2Q02817 5179 aa4.88□□□□□ -1.63
NUP85-216ENST00000581104 HRES1P13985 223 aa4.87□□□□□ -1.63
NUP85-216ENST00000581104 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.63
NUP85-216ENST00000581104 COX6B2Q6YFQ2 88 aa4.82□□□□□ -1.64
NUP85-216ENST00000581104 P0C880 135 aa4.81□□□□□ -1.64
NUP85-216ENST00000581104 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
NUP85-216ENST00000581104 KRTAP19-2Q3LHN2 52 aa4.8□□□□□ -1.64
NUP85-216ENST00000581104 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
NUP85-216ENST00000581104 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.64
NUP85-216ENST00000581104 K7ERS5 55 aa4.76□□□□□ -1.65
NUP85-216ENST00000581104 UQCR11O14957 56 aa4.76□□□□□ -1.65
NUP85-216ENST00000581104 ACYP2P14621 99 aa4.76□□□□□ -1.65
NUP85-216ENST00000581104 DMAC1Q96GE9 116 aa4.75□□□□□ -1.65
NUP85-216ENST00000581104 FAT4Q6V0I7 4981 aa4.75□□□□□ -1.65
NUP85-216ENST00000581104 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
NUP85-216ENST00000581104 LCE2AQ5TA79 106 aaPredicted RBP4.73□□□□□ -1.65
NUP85-216ENST00000581104 MT1HP80294 61 aa4.72□□□□□ -1.65
NUP85-216ENST00000581104 M0R2T5 61 aa4.69□□□□□ -1.66
NUP85-216ENST00000581104 KRTAP9-2Q9BYQ4 174 aa4.69□□□□□ -1.66
NUP85-216ENST00000581104 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
NUP85-216ENST00000581104 H1FX-AS1Q4G0G2 97 aa4.66□□□□□ -1.66
NUP85-216ENST00000581104 FLGP20930 4061 aaPredicted RBP4.66□□□□□ -1.66
NUP85-216ENST00000581104 A0A1B0GU69 56 aa4.65□□□□□ -1.66
NUP85-216ENST00000581104 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
NUP85-216ENST00000581104 KRTAP3-3Q9BYR6 98 aa4.6□□□□□ -1.67
NUP85-216ENST00000581104 KRTAP10-6P60371 365 aaPredicted RBP4.6□□□□□ -1.67
NUP85-216ENST00000581104 S4R3F8 94 aa4.57□□□□□ -1.68
NUP85-216ENST00000581104 LORP23490 312 aaPredicted RBP4.57□□□□□ -1.68
NUP85-216ENST00000581104 SPINT4Q6UDR6 99 aa4.55□□□□□ -1.68
NUP85-216ENST00000581104 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
NUP85-216ENST00000581104 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
NUP85-216ENST00000581104 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
NUP85-216ENST00000581104 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
NUP85-216ENST00000581104 MT2AP02795 61 aa4.47□□□□□ -1.69
NUP85-216ENST00000581104 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
NUP85-216ENST00000581104 MT1FP04733 61 aa4.44□□□□□ -1.7
NUP85-216ENST00000581104 KRTAP3-2Q9BYR7 98 aa4.42□□□□□ -1.7
NUP85-216ENST00000581104 H0YAA0 97 aa4.4□□□□□ -1.7
NUP85-216ENST00000581104 CRCT1Q9UGL9 99 aa4.4□□□□□ -1.71
NUP85-216ENST00000581104 A0A1B0GU33 70 aa4.36□□□□□ -1.71
NUP85-216ENST00000581104 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
NUP85-216ENST00000581104 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
NUP85-216ENST00000581104 CRIPTQ9P021 101 aa4.29□□□□□ -1.72
NUP85-216ENST00000581104 LCE2BO14633 110 aa4.27□□□□□ -1.73
NUP85-216ENST00000581104 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
NUP85-216ENST00000581104 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
NUP85-216ENST00000581104 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
NUP85-216ENST00000581104 A0A0D9SG42 100 aa4.22□□□□□ -1.73
NUP85-216ENST00000581104 M0QZ58 72 aa4.22□□□□□ -1.73
NUP85-216ENST00000581104 R4GN34 69 aa4.22□□□□□ -1.73
NUP85-216ENST00000581104 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
NUP85-216ENST00000581104 USH2AO75445 5202 aa4.16□□□□□ -1.74
NUP85-216ENST00000581104 MT1BP07438 61 aa4.13□□□□□ -1.75
NUP85-216ENST00000581104 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
NUP85-216ENST00000581104 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
NUP85-216ENST00000581104 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
NUP85-216ENST00000581104 KRTAP12-1P59990 96 aa4.11□□□□□ -1.75
NUP85-216ENST00000581104 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
NUP85-216ENST00000581104 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
NUP85-216ENST00000581104 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.76
NUP85-216ENST00000581104 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
NUP85-216ENST00000581104 SSPOA2VEC9 5147 aa4.07□□□□□ -1.76
NUP85-216ENST00000581104 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
NUP85-216ENST00000581104 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
NUP85-216ENST00000581104 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
NUP85-216ENST00000581104 MT1XP80297 61 aa3.94□□□□□ -1.78
NUP85-216ENST00000581104 INE1O15225 51 aa3.9□□□□□ -1.78
NUP85-216ENST00000581104 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
NUP85-216ENST00000581104 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
NUP85-216ENST00000581104 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
NUP85-216ENST00000581104 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
NUP85-216ENST00000581104 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
NUP85-216ENST00000581104 TNP1P09430 55 aa3.73□□□□□ -1.81
NUP85-216ENST00000581104 KMT2DO14686 5537 aa3.72□□□□□ -1.81
NUP85-216ENST00000581104 PP632Q6XCG6 107 aa3.7□□□□□ -1.82
NUP85-216ENST00000581104 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
NUP85-216ENST00000581104 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
NUP85-216ENST00000581104 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
NUP85-216ENST00000581104 NEBP20929 6669 aa3.68□□□□□ -1.82
NUP85-216ENST00000581104 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
NUP85-216ENST00000581104 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms