RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 NREPQ16612 68 aa3.66□□□□□ -1.82
CASC3-205ENST00000577605 DEFB116Q30KQ4 102 aa3.66□□□□□ -1.82
CASC3-205ENST00000577605 LINC00643Q86TS7 51 aa3.66□□□□□ -1.82
CASC3-205ENST00000577605 SERP2Q8N6R1 65 aa3.66□□□□□ -1.82
CASC3-205ENST00000577605 FAT4Q6V0I7 4981 aa3.65□□□□□ -1.82
CASC3-205ENST00000577605 A8MWP4 228 aa3.65□□□□□ -1.83
CASC3-205ENST00000577605 ATP5EP56381 51 aaPredicted RBP3.65□□□□□ -1.83
CASC3-205ENST00000577605 MT1HP80294 61 aa3.65□□□□□ -1.83
CASC3-205ENST00000577605 C14orf132Q9NPU4 83 aa3.65□□□□□ -1.83
CASC3-205ENST00000577605 M0R2T5 61 aa3.63□□□□□ -1.83
CASC3-205ENST00000577605 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
CASC3-205ENST00000577605 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
CASC3-205ENST00000577605 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
CASC3-205ENST00000577605 IGKV3D-7A0A0C4DH55 119 aa3.6□□□□□ -1.83
CASC3-205ENST00000577605 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
CASC3-205ENST00000577605 ZCCHC13Q8WW36 166 aaKnown RBP3.6□□□□□ -1.83
CASC3-205ENST00000577605 TMEM254Q8TBM7 123 aa3.58□□□□□ -1.84
CASC3-205ENST00000577605 CYSTM1Q9H1C7 97 aa3.58□□□□□ -1.84
CASC3-205ENST00000577605 NDUFC1O43677 76 aa3.57□□□□□ -1.84
CASC3-205ENST00000577605 MRPL34Q9BQ48 92 aaKnown RBP3.57□□□□□ -1.84
CASC3-205ENST00000577605 UBL5Q9BZL1 73 aa3.57□□□□□ -1.84
CASC3-205ENST00000577605 hDV103S1A0JD37 113 aa3.56□□□□□ -1.84
CASC3-205ENST00000577605 HRES1P13985 223 aa3.56□□□□□ -1.84
CASC3-205ENST00000577605 SPINK7P58062 85 aa3.56□□□□□ -1.84
CASC3-205ENST00000577605 MMP24-AS1A0A0U1RRL7 71 aa3.55□□□□□ -1.84
CASC3-205ENST00000577605 WFDC13Q8IUB5 93 aa3.55□□□□□ -1.84
CASC3-205ENST00000577605 H7BZZ5 65 aa3.54□□□□□ -1.84
CASC3-205ENST00000577605 K7EQZ3 153 aa3.54□□□□□ -1.84
CASC3-205ENST00000577605 MT3P25713 68 aa3.53□□□□□ -1.84
CASC3-205ENST00000577605 KLKP1Q107X0 134 aa3.53□□□□□ -1.84
CASC3-205ENST00000577605 LCA10Q71F78 164 aa3.53□□□□□ -1.84
CASC3-205ENST00000577605 A8MUN3 132 aa3.52□□□□□ -1.85
CASC3-205ENST00000577605 K7ERS5 55 aa3.52□□□□□ -1.85
CASC3-205ENST00000577605 CASC2Q6XLA1 102 aa3.52□□□□□ -1.85
CASC3-205ENST00000577605 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
CASC3-205ENST00000577605 LINC00846Q9NV44 126 aa3.51□□□□□ -1.85
CASC3-205ENST00000577605 Q1T7F1 81 aa3.5□□□□□ -1.85
CASC3-205ENST00000577605 ATP5EP2Q5VTU8 51 aa3.49□□□□□ -1.85
CASC3-205ENST00000577605 TRAV7A0A075B6U4 112 aa3.48□□□□□ -1.85
CASC3-205ENST00000577605 HCG22E2RYF7 251 aa3.48□□□□□ -1.85
CASC3-205ENST00000577605 C7orf65Q6ZTY9 151 aa3.48□□□□□ -1.85
CASC3-205ENST00000577605 TP53AIP1Q9HCN2 124 aa3.48□□□□□ -1.85
CASC3-205ENST00000577605 Q5W150 140 aa3.47□□□□□ -1.85
CASC3-205ENST00000577605 SPANXA2-OT1Q8N9U9 137 aa3.47□□□□□ -1.85
CASC3-205ENST00000577605 C20orf197Q8N268 126 aa3.46□□□□□ -1.86
CASC3-205ENST00000577605 Q8N9L7 120 aa3.46□□□□□ -1.86
CASC3-205ENST00000577605 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
CASC3-205ENST00000577605 H1FX-AS1Q4G0G2 97 aa3.45□□□□□ -1.86
CASC3-205ENST00000577605 FSIP2Q5CZC0 6907 aa3.44□□□□□ -1.86
CASC3-205ENST00000577605 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
CASC3-205ENST00000577605 A6NN06 94 aa3.43□□□□□ -1.86
CASC3-205ENST00000577605 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
CASC3-205ENST00000577605 ADM2Q7Z4H4 148 aa3.43□□□□□ -1.86
CASC3-205ENST00000577605 MT2AP02795 61 aa3.41□□□□□ -1.86
CASC3-205ENST00000577605 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
CASC3-205ENST00000577605 LINC01554Q52M75 96 aa3.41□□□□□ -1.86
CASC3-205ENST00000577605 FLGP20930 4061 aaPredicted RBP3.4□□□□□ -1.86
CASC3-205ENST00000577605 A6NED7 52 aa3.4□□□□□ -1.87
CASC3-205ENST00000577605 CYP4F30PQ9H0H9 118 aa3.38□□□□□ -1.87
CASC3-205ENST00000577605 MT1FP04733 61 aa3.37□□□□□ -1.87
CASC3-205ENST00000577605 A0A087WVE0 104 aa3.36□□□□□ -1.87
CASC3-205ENST00000577605 TRAV22A0A0B4J277 110 aa3.36□□□□□ -1.87
CASC3-205ENST00000577605 LOC101927531A0A1B0GV80 90 aa3.36□□□□□ -1.87
CASC3-205ENST00000577605 C1orf64Q8NEQ6 169 aa3.35□□□□□ -1.87
CASC3-205ENST00000577605 CSAG1Q6PB30 78 aa3.33□□□□□ -1.88
CASC3-205ENST00000577605 CDC42SE1Q9NRR8 79 aa3.33□□□□□ -1.88
CASC3-205ENST00000577605 SNURFQ9Y675 71 aa3.33□□□□□ -1.88
CASC3-205ENST00000577605 Q5VV11 94 aa3.32□□□□□ -1.88
CASC3-205ENST00000577605 S4R3F8 94 aa3.32□□□□□ -1.88
CASC3-205ENST00000577605 H0Y9P7 68 aa3.29□□□□□ -1.88
CASC3-205ENST00000577605 SPTSSBQ8NFR3 76 aa3.29□□□□□ -1.88
CASC3-205ENST00000577605 CHKB-CPT1BH3BT56 60 aa3.28□□□□□ -1.88
CASC3-205ENST00000577605 H3BPC8 53 aa3.27□□□□□ -1.89
CASC3-205ENST00000577605 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
CASC3-205ENST00000577605 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
CASC3-205ENST00000577605 LINC00208Q96KT6 92 aa3.24□□□□□ -1.89
CASC3-205ENST00000577605 CRIPTQ9P021 101 aa3.24□□□□□ -1.89
CASC3-205ENST00000577605 A0A1B0GU33 70 aa3.23□□□□□ -1.89
CASC3-205ENST00000577605 A8MU10 97 aa3.23□□□□□ -1.89
CASC3-205ENST00000577605 H0YAA0 97 aa3.22□□□□□ -1.89
CASC3-205ENST00000577605 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
CASC3-205ENST00000577605 PRR15LQ9BU68 103 aa3.2□□□□□ -1.9
CASC3-205ENST00000577605 SPRR2GQ9BYE4 73 aa3.2□□□□□ -1.9
CASC3-205ENST00000577605 USH2AO75445 5202 aa3.19□□□□□ -1.9
CASC3-205ENST00000577605 SPINT4Q6UDR6 99 aa3.19□□□□□ -1.9
CASC3-205ENST00000577605 KRTAP10-12P60413 245 aa3.17□□□□□ -1.9
CASC3-205ENST00000577605 KRTAP25-1Q3LHN0 102 aa3.17□□□□□ -1.9
CASC3-205ENST00000577605 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
CASC3-205ENST00000577605 ROMO1P60602 79 aa3.15□□□□□ -1.91
CASC3-205ENST00000577605 DMAC1Q96GE9 116 aa3.15□□□□□ -1.91
CASC3-205ENST00000577605 LINC01558Q9Y6Z2 57 aa3.15□□□□□ -1.91
CASC3-205ENST00000577605 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
CASC3-205ENST00000577605 ACYP2P14621 99 aa3.12□□□□□ -1.91
CASC3-205ENST00000577605 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
CASC3-205ENST00000577605 MT1BP07438 61 aa3.11□□□□□ -1.91
CASC3-205ENST00000577605 R4GN34 69 aa3.11□□□□□ -1.91
CASC3-205ENST00000577605 MIR22HGQ0VDD5 57 aa3.07□□□□□ -1.92
CASC3-205ENST00000577605 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
CASC3-205ENST00000577605 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
CASC3-205ENST00000577605 PRO2289Q9P1D8 64 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms