RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 H3BPC8 53 aa7.01□□□□□ -1.29
RPAIN-209ENST00000571558 C20orf197Q8N268 126 aa7.01□□□□□ -1.29
RPAIN-209ENST00000571558 C1orf64Q8NEQ6 169 aa7.01□□□□□ -1.29
RPAIN-209ENST00000571558 LINC00208Q96KT6 92 aa7.01□□□□□ -1.29
RPAIN-209ENST00000571558 CYP4F30PQ9H0H9 118 aa7.01□□□□□ -1.29
RPAIN-209ENST00000571558 HRES1P13985 223 aa7□□□□□ -1.29
RPAIN-209ENST00000571558 KRTAP9-9Q9BYP9 154 aa6.99□□□□□ -1.29
RPAIN-209ENST00000571558 KRTAP9-4Q9BYQ2 154 aa6.99□□□□□ -1.29
RPAIN-209ENST00000571558 FCGBPQ9Y6R7 5405 aaPredicted RBP6.98□□□□□ -1.29
RPAIN-209ENST00000571558 NDUFC1O43677 76 aa6.98□□□□□ -1.29
RPAIN-209ENST00000571558 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
RPAIN-209ENST00000571558 MPLKIPQ8TAP9 179 aa6.97□□□□□ -1.29
RPAIN-209ENST00000571558 TMEM258P61165 79 aa6.92□□□□□ -1.3
RPAIN-209ENST00000571558 KRTAP9-8Q9BYQ0 159 aa6.92□□□□□ -1.3
RPAIN-209ENST00000571558 SNURFQ9Y675 71 aa6.92□□□□□ -1.3
RPAIN-209ENST00000571558 H7BZZ5 65 aa6.9□□□□□ -1.31
RPAIN-209ENST00000571558 CYSTM1Q9H1C7 97 aa6.9□□□□□ -1.31
RPAIN-209ENST00000571558 C4orf26Q17RF5 130 aa6.88□□□□□ -1.31
RPAIN-209ENST00000571558 MACF1Q9UPN3 7388 aaKnown RBP6.87□□□□□ -1.31
RPAIN-209ENST00000571558 KRTAP19-1Q8IUB9 90 aa6.85□□□□□ -1.31
RPAIN-209ENST00000571558 RBM12B-AS1Q9P1G2 102 aa6.85□□□□□ -1.31
RPAIN-209ENST00000571558 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.31
RPAIN-209ENST00000571558 SYNE2Q8WXH0 6885 aaKnown RBP6.84□□□□□ -1.31
RPAIN-209ENST00000571558 KRTAP3-1Q9BYR8 98 aa6.84□□□□□ -1.32
RPAIN-209ENST00000571558 FAM236DA0A1B0GTK5 79 aa6.79□□□□□ -1.32
RPAIN-209ENST00000571558 FAM236CP0DP71 79 aa6.79□□□□□ -1.32
RPAIN-209ENST00000571558 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
RPAIN-209ENST00000571558 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
RPAIN-209ENST00000571558 MT2AP02795 61 aa6.75□□□□□ -1.33
RPAIN-209ENST00000571558 RPS28P62857 69 aaKnown RBP6.75□□□□□ -1.33
RPAIN-209ENST00000571558 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
RPAIN-209ENST00000571558 DMAC1Q96GE9 116 aa6.73□□□□□ -1.33
RPAIN-209ENST00000571558 A8MUN3 132 aa6.72□□□□□ -1.33
RPAIN-209ENST00000571558 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
RPAIN-209ENST00000571558 SERP1Q9Y6X1 66 aa6.7□□□□□ -1.34
RPAIN-209ENST00000571558 MT1FP04733 61 aa6.68□□□□□ -1.34
RPAIN-209ENST00000571558 LCE1DQ5T752 114 aa6.68□□□□□ -1.34
RPAIN-209ENST00000571558 KRTAP10-10P60014 251 aa6.67□□□□□ -1.34
RPAIN-209ENST00000571558 KRTAP19-6Q3LI70 58 aa6.66□□□□□ -1.34
RPAIN-209ENST00000571558 KRTAP6-3Q3LI67 103 aa6.65□□□□□ -1.35
RPAIN-209ENST00000571558 S4R3F8 94 aa6.62□□□□□ -1.35
RPAIN-209ENST00000571558 ACYP2P14621 99 aa6.61□□□□□ -1.35
RPAIN-209ENST00000571558 LCA10Q71F78 164 aa6.61□□□□□ -1.35
RPAIN-209ENST00000571558 SMIM26A0A096LP01 95 aa6.53□□□□□ -1.36
RPAIN-209ENST00000571558 COA5Q86WW8 74 aa6.52□□□□□ -1.37
RPAIN-209ENST00000571558 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
RPAIN-209ENST00000571558 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
RPAIN-209ENST00000571558 CSAG1Q6PB30 78 aa6.5□□□□□ -1.37
RPAIN-209ENST00000571558 NEBP20929 6669 aa6.48□□□□□ -1.37
RPAIN-209ENST00000571558 CHKB-CPT1BH3BT56 60 aa6.47□□□□□ -1.37
RPAIN-209ENST00000571558 KRTAP4-2Q9BYR5 136 aa6.45□□□□□ -1.38
RPAIN-209ENST00000571558 SPTSSBQ8NFR3 76 aa6.42□□□□□ -1.38
RPAIN-209ENST00000571558 V9GYY9 64 aa6.42□□□□□ -1.38
RPAIN-209ENST00000571558 Q1T7F1 81 aa6.41□□□□□ -1.38
RPAIN-209ENST00000571558 H0YAA0 97 aa6.37□□□□□ -1.39
RPAIN-209ENST00000571558 KRTAP20-1Q3LI63 56 aa6.34□□□□□ -1.39
RPAIN-209ENST00000571558 MUC12Q9UKN1 5478 aa6.34□□□□□ -1.39
RPAIN-209ENST00000571558 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
RPAIN-209ENST00000571558 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
RPAIN-209ENST00000571558 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
RPAIN-209ENST00000571558 P0C880 135 aa6.25□□□□□ -1.41
RPAIN-209ENST00000571558 KRTAP4-11Q9BYQ6 195 aa6.24□□□□□ -1.41
RPAIN-209ENST00000571558 PRR15LQ9BU68 103 aa6.21□□□□□ -1.42
RPAIN-209ENST00000571558 PSPHP1O15172 72 aa6.19□□□□□ -1.42
RPAIN-209ENST00000571558 A6NN06 94 aa6.17□□□□□ -1.42
RPAIN-209ENST00000571558 Q5VV11 94 aa6.17□□□□□ -1.42
RPAIN-209ENST00000571558 A0A1B0GU69 56 aa6.16□□□□□ -1.42
RPAIN-209ENST00000571558 SEC61GP60059 68 aa6.16□□□□□ -1.42
RPAIN-209ENST00000571558 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
RPAIN-209ENST00000571558 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
RPAIN-209ENST00000571558 MDN1Q9NU22 5596 aa6.15□□□□□ -1.42
RPAIN-209ENST00000571558 SPRR2GQ9BYE4 73 aa6.14□□□□□ -1.43
RPAIN-209ENST00000571558 KMT2DO14686 5537 aa6.13□□□□□ -1.43
RPAIN-209ENST00000571558 KRTAP2-3P0C7H8 128 aa6.09□□□□□ -1.43
RPAIN-209ENST00000571558 KRTAP2-4Q9BYR9 128 aa6.09□□□□□ -1.43
RPAIN-209ENST00000571558 R4GN34 69 aa6.08□□□□□ -1.44
RPAIN-209ENST00000571558 A0A1B0GU33 70 aa6.06□□□□□ -1.44
RPAIN-209ENST00000571558 M0QZ58 72 aa6.06□□□□□ -1.44
RPAIN-209ENST00000571558 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
RPAIN-209ENST00000571558 A6NED7 52 aa6.04□□□□□ -1.44
RPAIN-209ENST00000571558 UQCR11O14957 56 aa6.02□□□□□ -1.45
RPAIN-209ENST00000571558 MT1BP07438 61 aa6.02□□□□□ -1.45
RPAIN-209ENST00000571558 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
RPAIN-209ENST00000571558 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
RPAIN-209ENST00000571558 BRK1Q8WUW1 75 aa5.99□□□□□ -1.45
RPAIN-209ENST00000571558 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
RPAIN-209ENST00000571558 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
RPAIN-209ENST00000571558 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
RPAIN-209ENST00000571558 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
RPAIN-209ENST00000571558 A0A0A0MQY5 61 aa5.97□□□□□ -1.45
RPAIN-209ENST00000571558 MIR22HGQ0VDD5 57 aa5.93□□□□□ -1.46
RPAIN-209ENST00000571558 LINC01554Q52M75 96 aa5.93□□□□□ -1.46
RPAIN-209ENST00000571558 LCE5AQ5TCM9 118 aa5.93□□□□□ -1.46
RPAIN-209ENST00000571558 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
RPAIN-209ENST00000571558 KRTAP2-2Q9BYT5 123 aa5.87□□□□□ -1.47
RPAIN-209ENST00000571558 KRTAP2-1Q9BYU5 128 aa5.87□□□□□ -1.47
RPAIN-209ENST00000571558 A0A0D9SG42 100 aa5.86□□□□□ -1.47
RPAIN-209ENST00000571558 A8MU10 97 aa5.86□□□□□ -1.47
RPAIN-209ENST00000571558 SPRR2EP22531 72 aa5.83□□□□□ -1.48
RPAIN-209ENST00000571558 SPRR2BP35325 72 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms