RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ETDCA0A1B0GVM5 59 aa1.41□□□□□ -2.18
HMGB1P6-201ENST00000569046 IGIPA6NJ69 53 aa1.41□□□□□ -2.18
HMGB1P6-201ENST00000569046 RPL37P61927 97 aaKnown RBP1.41□□□□□ -2.18
HMGB1P6-201ENST00000569046 ADIRFQ15847 76 aa1.41□□□□□ -2.18
HMGB1P6-201ENST00000569046 KRTAP20-1Q3LI63 56 aa1.41□□□□□ -2.18
HMGB1P6-201ENST00000569046 KRTAP13-4Q3LI77 160 aa1.41□□□□□ -2.18
HMGB1P6-201ENST00000569046 LINC00299Q6ZSB3 139 aa1.41□□□□□ -2.18
HMGB1P6-201ENST00000569046 SSBP3-AS1Q7Z2R9 100 aa1.41□□□□□ -2.18
HMGB1P6-201ENST00000569046 TRBV10-3A0A0K0K1G6 114 aa1.4□□□□□ -2.19
HMGB1P6-201ENST00000569046 SMIM27A0A1W2PRY6 76 aa1.4□□□□□ -2.19
HMGB1P6-201ENST00000569046 CCKP06307 115 aa1.4□□□□□ -2.19
HMGB1P6-201ENST00000569046 LINC00158P58513 81 aa1.4□□□□□ -2.19
HMGB1P6-201ENST00000569046 ALKAL2Q6UX46 152 aa1.4□□□□□ -2.19
HMGB1P6-201ENST00000569046 DMAC1Q96GE9 116 aa1.4□□□□□ -2.19
HMGB1P6-201ENST00000569046 SPANXDQ9BXN6 97 aa1.4□□□□□ -2.19
HMGB1P6-201ENST00000569046 LOC101927531A0A1B0GV80 90 aa1.39□□□□□ -2.19
HMGB1P6-201ENST00000569046 SMIM13P0DJ93 91 aa1.39□□□□□ -2.19
HMGB1P6-201ENST00000569046 RPS29P62273 56 aaKnown RBP1.39□□□□□ -2.19
HMGB1P6-201ENST00000569046 KRTAP19-6Q3LI70 58 aa1.39□□□□□ -2.19
HMGB1P6-201ENST00000569046 COL5A1-AS1Q5SY13 56 aa1.39□□□□□ -2.19
HMGB1P6-201ENST00000569046 OBSCN-AS1Q96MR7 158 aa1.39□□□□□ -2.19
HMGB1P6-201ENST00000569046 SNHG12Q9BXW3 62 aa1.39□□□□□ -2.19
HMGB1P6-201ENST00000569046 PDE6GP18545 87 aa1.38□□□□□ -2.19
HMGB1P6-201ENST00000569046 SPRR1AP35321 89 aa1.38□□□□□ -2.19
HMGB1P6-201ENST00000569046 SEC11AP67812 179 aa1.38□□□□□ -2.19
HMGB1P6-201ENST00000569046 SPATA45Q537H7 98 aa1.38□□□□□ -2.19
HMGB1P6-201ENST00000569046 DEFB105AQ8NG35 78 aa1.38□□□□□ -2.19
HMGB1P6-201ENST00000569046 KCNQ1DNQ9H478 68 aa1.38□□□□□ -2.19
HMGB1P6-201ENST00000569046 NEBP20929 6669 aa1.37□□□□□ -2.19
HMGB1P6-201ENST00000569046 TRAV13-2A0A0B4J235 113 aa1.37□□□□□ -2.19
HMGB1P6-201ENST00000569046 HCG22E2RYF7 251 aa1.37□□□□□ -2.19
HMGB1P6-201ENST00000569046 INE1O15225 51 aa1.37□□□□□ -2.19
HMGB1P6-201ENST00000569046 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
HMGB1P6-201ENST00000569046 COX17Q14061 63 aa1.37□□□□□ -2.19
HMGB1P6-201ENST00000569046 TMEM170BQ5T4T1 132 aa1.37□□□□□ -2.19
HMGB1P6-201ENST00000569046 ZCCHC13Q8WW36 166 aaKnown RBP1.37□□□□□ -2.19
HMGB1P6-201ENST00000569046 PMCHL1Q16048 86 aa1.36□□□□□ -2.19
HMGB1P6-201ENST00000569046 Q6ZRX8 168 aa1.36□□□□□ -2.19
HMGB1P6-201ENST00000569046 LINC00846Q9NV44 126 aa1.36□□□□□ -2.19
HMGB1P6-201ENST00000569046 LOC110117498A0A087WWA1 95 aa1.35□□□□□ -2.19
HMGB1P6-201ENST00000569046 IGKV3D-7A0A0C4DH55 119 aa1.35□□□□□ -2.19
HMGB1P6-201ENST00000569046 MT-ATP8P03928 68 aa1.35□□□□□ -2.19
HMGB1P6-201ENST00000569046 IGLC3P0DOY3 106 aa1.35□□□□□ -2.19
HMGB1P6-201ENST00000569046 C20orf197Q8N268 126 aa1.35□□□□□ -2.19
HMGB1P6-201ENST00000569046 Q96NJ1 140 aa1.35□□□□□ -2.19
HMGB1P6-201ENST00000569046 NXT2Q9NPJ8 142 aaKnown RBP1.35□□□□□ -2.19
HMGB1P6-201ENST00000569046 TEX49A0A1B0GTD5 131 aa1.34□□□□□ -2.19
HMGB1P6-201ENST00000569046 BAGE3Q86Y29 109 aa1.34□□□□□ -2.19
HMGB1P6-201ENST00000569046 PRO1933Q9H354 126 aa1.34□□□□□ -2.19
HMGB1P6-201ENST00000569046 MUC12Q9UKN1 5478 aa1.34□□□□□ -2.2
HMGB1P6-201ENST00000569046 K7EMI3 77 aa1.33□□□□□ -2.2
HMGB1P6-201ENST00000569046 ATP5EP56381 51 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P6-201ENST00000569046 VAMP8Q9BV40 100 aa1.33□□□□□ -2.2
HMGB1P6-201ENST00000569046 SMCO4Q9NRQ5 59 aa1.33□□□□□ -2.2
HMGB1P6-201ENST00000569046 hADV29S1A0JD25 119 aa1.32□□□□□ -2.2
HMGB1P6-201ENST00000569046 KRTAP2-3P0C7H8 128 aa1.32□□□□□ -2.2
HMGB1P6-201ENST00000569046 SPRR1BP22528 89 aa1.32□□□□□ -2.2
HMGB1P6-201ENST00000569046 PEA15Q15121 130 aa1.32□□□□□ -2.2
HMGB1P6-201ENST00000569046 LINC00208Q96KT6 92 aa1.32□□□□□ -2.2
HMGB1P6-201ENST00000569046 KRTAP2-4Q9BYR9 128 aa1.32□□□□□ -2.2
HMGB1P6-201ENST00000569046 A0A1W2PPM0 123 aa1.31□□□□□ -2.2
HMGB1P6-201ENST00000569046 LINC01546A6NGU7 62 aa1.31□□□□□ -2.2
HMGB1P6-201ENST00000569046 PMCHL2Q9BQD1 86 aa1.31□□□□□ -2.2
HMGB1P6-201ENST00000569046 HMCN1Q96RW7 5635 aa1.3□□□□□ -2.2
HMGB1P6-201ENST00000569046 MYMXA0A1B0GTQ4 84 aa1.3□□□□□ -2.2
HMGB1P6-201ENST00000569046 COX7BP24311 80 aa1.3□□□□□ -2.2
HMGB1P6-201ENST00000569046 SFTA2Q6UW10 78 aa1.3□□□□□ -2.2
HMGB1P6-201ENST00000569046 Q6ZQY7 126 aa1.3□□□□□ -2.2
HMGB1P6-201ENST00000569046 ELOF1P60002 83 aaKnown RBP1.29□□□□□ -2.2
HMGB1P6-201ENST00000569046 C18orf32Q8TCD1 76 aa1.29□□□□□ -2.2
HMGB1P6-201ENST00000569046 TRBV7-7A0A0K0K1E9 115 aa1.28□□□□□ -2.2
HMGB1P6-201ENST00000569046 LINC01549A6NIU2 74 aa1.28□□□□□ -2.2
HMGB1P6-201ENST00000569046 SPRR2EP22531 72 aa1.28□□□□□ -2.2
HMGB1P6-201ENST00000569046 SPRR2BP35325 72 aa1.28□□□□□ -2.2
HMGB1P6-201ENST00000569046 SPRR2AP35326 72 aa1.28□□□□□ -2.2
HMGB1P6-201ENST00000569046 CYP4F30PQ9H0H9 118 aa1.28□□□□□ -2.2
HMGB1P6-201ENST00000569046 CYSTM1Q9H1C7 97 aa1.28□□□□□ -2.2
HMGB1P6-201ENST00000569046 IGLV5-48A0A075B6I7 105 aa1.27□□□□□ -2.21
HMGB1P6-201ENST00000569046 CHKB-CPT1BH3BT56 60 aa1.27□□□□□ -2.21
HMGB1P6-201ENST00000569046 KRTDAPP60985 99 aa1.27□□□□□ -2.21
HMGB1P6-201ENST00000569046 LINC00308Q8TCZ7 52 aa1.27□□□□□ -2.21
HMGB1P6-201ENST00000569046 KRTAP2-1Q9BYU5 128 aa1.27□□□□□ -2.21
HMGB1P6-201ENST00000569046 F8WEM9 126 aa1.26□□□□□ -2.21
HMGB1P6-201ENST00000569046 H3BUT2 72 aa1.26□□□□□ -2.21
HMGB1P6-201ENST00000569046 MT1BP07438 61 aa1.26□□□□□ -2.21
HMGB1P6-201ENST00000569046 SPRR2FQ96RM1 72 aa1.26□□□□□ -2.21
HMGB1P6-201ENST00000569046 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
HMGB1P6-201ENST00000569046 APOC3P02656 99 aa1.25□□□□□ -2.21
HMGB1P6-201ENST00000569046 KMT2DO14686 5537 aa1.25□□□□□ -2.21
HMGB1P6-201ENST00000569046 SPINK7P58062 85 aa1.24□□□□□ -2.21
HMGB1P6-201ENST00000569046 KLKP1Q107X0 134 aa1.24□□□□□ -2.21
HMGB1P6-201ENST00000569046 WFDC13Q8IUB5 93 aa1.24□□□□□ -2.21
HMGB1P6-201ENST00000569046 SMIM11BQ8TCY0 68 aa1.24□□□□□ -2.21
HMGB1P6-201ENST00000569046 UQCR10Q9UDW1 63 aa1.24□□□□□ -2.21
HMGB1P6-201ENST00000569046 TRAV22A0A0B4J277 110 aa1.23□□□□□ -2.21
HMGB1P6-201ENST00000569046 ATOX1O00244 68 aa1.23□□□□□ -2.21
HMGB1P6-201ENST00000569046 LEPROTL1O95214 131 aa1.23□□□□□ -2.21
HMGB1P6-201ENST00000569046 SPRR2DP22532 72 aa1.23□□□□□ -2.21
HMGB1P6-201ENST00000569046 Q5VV11 94 aa1.23□□□□□ -2.21
HMGB1P6-201ENST00000569046 Q6JHZ5 121 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms