RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
VPS9D1-207ENST00000568691 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
VPS9D1-207ENST00000568691 RPL37P61927 97 aaKnown RBP6.18□□□□□ -1.42
VPS9D1-207ENST00000568691 SPANXA2-OT1Q8N9U9 137 aa6.18□□□□□ -1.42
VPS9D1-207ENST00000568691 NEBP20929 6669 aa6.18□□□□□ -1.42
VPS9D1-207ENST00000568691 FAM236DA0A1B0GTK5 79 aa6.16□□□□□ -1.42
VPS9D1-207ENST00000568691 MT2AP02795 61 aa6.16□□□□□ -1.42
VPS9D1-207ENST00000568691 FAM236CP0DP71 79 aa6.16□□□□□ -1.42
VPS9D1-207ENST00000568691 CYP4F30PQ9H0H9 118 aa6.16□□□□□ -1.42
VPS9D1-207ENST00000568691 C7orf65Q6ZTY9 151 aa6.15□□□□□ -1.42
VPS9D1-207ENST00000568691 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
VPS9D1-207ENST00000568691 ATP11AUNQ6ZP68 121 aa6.13□□□□□ -1.43
VPS9D1-207ENST00000568691 MT1FP04733 61 aa6.12□□□□□ -1.43
VPS9D1-207ENST00000568691 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
VPS9D1-207ENST00000568691 IGKV2D-30A0A075B6S6 120 aa6.1□□□□□ -1.43
VPS9D1-207ENST00000568691 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
VPS9D1-207ENST00000568691 HRES1P13985 223 aa6.04□□□□□ -1.44
VPS9D1-207ENST00000568691 SERP1Q9Y6X1 66 aa6.04□□□□□ -1.44
VPS9D1-207ENST00000568691 SPINK7P58062 85 aa6.03□□□□□ -1.44
VPS9D1-207ENST00000568691 RPS28P62857 69 aaKnown RBP6.02□□□□□ -1.45
VPS9D1-207ENST00000568691 DMAC1Q96GE9 116 aa6.02□□□□□ -1.45
VPS9D1-207ENST00000568691 A8MUN3 132 aa6.01□□□□□ -1.45
VPS9D1-207ENST00000568691 KRTAP20-1Q3LI63 56 aa6□□□□□ -1.45
VPS9D1-207ENST00000568691 ACYP2P14621 99 aa5.96□□□□□ -1.46
VPS9D1-207ENST00000568691 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
VPS9D1-207ENST00000568691 COA5Q86WW8 74 aa5.92□□□□□ -1.46
VPS9D1-207ENST00000568691 C4orf26Q17RF5 130 aa5.91□□□□□ -1.46
VPS9D1-207ENST00000568691 MPLKIPQ8TAP9 179 aa5.89□□□□□ -1.47
VPS9D1-207ENST00000568691 SMIM26A0A096LP01 95 aa5.86□□□□□ -1.47
VPS9D1-207ENST00000568691 RBM12B-AS1Q9P1G2 102 aa5.86□□□□□ -1.47
VPS9D1-207ENST00000568691 CHKB-CPT1BH3BT56 60 aa5.84□□□□□ -1.47
VPS9D1-207ENST00000568691 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
VPS9D1-207ENST00000568691 MDN1Q9NU22 5596 aa5.81□□□□□ -1.48
VPS9D1-207ENST00000568691 SPTSSBQ8NFR3 76 aa5.8□□□□□ -1.48
VPS9D1-207ENST00000568691 V9GYY9 64 aa5.8□□□□□ -1.48
VPS9D1-207ENST00000568691 KMT2DO14686 5537 aa5.79□□□□□ -1.48
VPS9D1-207ENST00000568691 H1FX-AS1Q4G0G2 97 aa5.78□□□□□ -1.48
VPS9D1-207ENST00000568691 Q1T7F1 81 aa5.77□□□□□ -1.49
VPS9D1-207ENST00000568691 S4R3F8 94 aa5.74□□□□□ -1.49
VPS9D1-207ENST00000568691 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.5
VPS9D1-207ENST00000568691 KRTAP5-9P26371 169 aa5.68□□□□□ -1.5
VPS9D1-207ENST00000568691 LCA10Q71F78 164 aa5.68□□□□□ -1.5
VPS9D1-207ENST00000568691 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
VPS9D1-207ENST00000568691 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
VPS9D1-207ENST00000568691 PRR15LQ9BU68 103 aa5.65□□□□□ -1.5
VPS9D1-207ENST00000568691 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.5
VPS9D1-207ENST00000568691 A0A1B0GU69 56 aa5.6□□□□□ -1.51
VPS9D1-207ENST00000568691 SEC61GP60059 68 aa5.6□□□□□ -1.51
VPS9D1-207ENST00000568691 CSAG1Q6PB30 78 aa5.6□□□□□ -1.51
VPS9D1-207ENST00000568691 PSPHP1O15172 72 aa5.57□□□□□ -1.52
VPS9D1-207ENST00000568691 Q5VV11 94 aa5.57□□□□□ -1.52
VPS9D1-207ENST00000568691 H0YAA0 97 aa5.56□□□□□ -1.52
VPS9D1-207ENST00000568691 A6NN06 94 aa5.5□□□□□ -1.53
VPS9D1-207ENST00000568691 MT1BP07438 61 aa5.47□□□□□ -1.53
VPS9D1-207ENST00000568691 GPR98Q8WXG9 6306 aa5.47□□□□□ -1.53
VPS9D1-207ENST00000568691 UQCR11O14957 56 aa5.46□□□□□ -1.54
VPS9D1-207ENST00000568691 A6NED7 52 aa5.45□□□□□ -1.54
VPS9D1-207ENST00000568691 KRTAP3-2Q9BYR7 98 aa5.45□□□□□ -1.54
VPS9D1-207ENST00000568691 KRTAP2-2Q9BYT5 123 aa5.45□□□□□ -1.54
VPS9D1-207ENST00000568691 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
VPS9D1-207ENST00000568691 ADM2Q7Z4H4 148 aa5.43□□□□□ -1.54
VPS9D1-207ENST00000568691 A0A1B0GU33 70 aa5.42□□□□□ -1.54
VPS9D1-207ENST00000568691 KRTAP10-5P60370 271 aa5.41□□□□□ -1.54
VPS9D1-207ENST00000568691 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.54
VPS9D1-207ENST00000568691 P0C880 135 aa5.39□□□□□ -1.55
VPS9D1-207ENST00000568691 SPRR2EP22531 72 aa5.38□□□□□ -1.55
VPS9D1-207ENST00000568691 SPRR2BP35325 72 aa5.38□□□□□ -1.55
VPS9D1-207ENST00000568691 SPRR2AP35326 72 aa5.38□□□□□ -1.55
VPS9D1-207ENST00000568691 SPATA8Q6RVD6 105 aa5.37□□□□□ -1.55
VPS9D1-207ENST00000568691 MIR22HGQ0VDD5 57 aa5.36□□□□□ -1.55
VPS9D1-207ENST00000568691 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
VPS9D1-207ENST00000568691 M0QZ58 72 aa5.35□□□□□ -1.55
VPS9D1-207ENST00000568691 CRIPTQ9P021 101 aa5.32□□□□□ -1.56
VPS9D1-207ENST00000568691 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
VPS9D1-207ENST00000568691 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
VPS9D1-207ENST00000568691 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
VPS9D1-207ENST00000568691 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
VPS9D1-207ENST00000568691 R4GN34 69 aa5.28□□□□□ -1.56
VPS9D1-207ENST00000568691 KRTAP13-4Q3LI77 160 aa5.27□□□□□ -1.57
VPS9D1-207ENST00000568691 A8MU10 97 aa5.22□□□□□ -1.57
VPS9D1-207ENST00000568691 SPRR2GQ9BYE4 73 aa5.21□□□□□ -1.58
VPS9D1-207ENST00000568691 K7ERS5 55 aa5.19□□□□□ -1.58
VPS9D1-207ENST00000568691 SPRR2DP22532 72 aa5.19□□□□□ -1.58
VPS9D1-207ENST00000568691 A0A0D9SG42 100 aa5.15□□□□□ -1.59
VPS9D1-207ENST00000568691 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
VPS9D1-207ENST00000568691 KRTAP12-1P59990 96 aa5.11□□□□□ -1.59
VPS9D1-207ENST00000568691 LINC01554Q52M75 96 aa5.1□□□□□ -1.59
VPS9D1-207ENST00000568691 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
VPS9D1-207ENST00000568691 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
VPS9D1-207ENST00000568691 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
VPS9D1-207ENST00000568691 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
VPS9D1-207ENST00000568691 SPINT4Q6UDR6 99 aa5.04□□□□□ -1.6
VPS9D1-207ENST00000568691 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
VPS9D1-207ENST00000568691 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
VPS9D1-207ENST00000568691 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
VPS9D1-207ENST00000568691 MT1XP80297 61 aa4.96□□□□□ -1.62
VPS9D1-207ENST00000568691 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
VPS9D1-207ENST00000568691 CAMK2N1Q7Z7J9 78 aa4.93□□□□□ -1.62
VPS9D1-207ENST00000568691 ROMO1P60602 79 aa4.92□□□□□ -1.62
VPS9D1-207ENST00000568691 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 2189.5 ms