RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 H0Y9P7 68 aa8.98□□□□□ -0.97
LINC01238-205ENST00000567549 NDUFC1O43677 76 aa8.96□□□□□ -0.98
LINC01238-205ENST00000567549 SNURFQ9Y675 71 aa8.93□□□□□ -0.98
LINC01238-205ENST00000567549 LINC00208Q96KT6 92 aa8.92□□□□□ -0.98
LINC01238-205ENST00000567549 H1FX-AS1Q4G0G2 97 aa8.91□□□□□ -0.98
LINC01238-205ENST00000567549 C1orf64Q8NEQ6 169 aa8.9□□□□□ -0.98
LINC01238-205ENST00000567549 KRTAP19-6Q3LI70 58 aa8.89□□□□□ -0.99
LINC01238-205ENST00000567549 Q5W150 140 aa8.87□□□□□ -0.99
LINC01238-205ENST00000567549 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
LINC01238-205ENST00000567549 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
LINC01238-205ENST00000567549 H7BZZ5 65 aa8.84□□□□□ -0.99
LINC01238-205ENST00000567549 CYSTM1Q9H1C7 97 aa8.83□□□□□ -1
LINC01238-205ENST00000567549 TMEM258P61165 79 aa8.82□□□□□ -1
LINC01238-205ENST00000567549 IGKV2D-30A0A075B6S6 120 aa8.81□□□□□ -1
LINC01238-205ENST00000567549 IGKV2-30P06310 120 aa8.81□□□□□ -1
LINC01238-205ENST00000567549 MACF1Q9UPN3 7388 aaKnown RBP8.8□□□□□ -1
LINC01238-205ENST00000567549 H3BS24 57 aa8.79□□□□□ -1
LINC01238-205ENST00000567549 CYP4F30PQ9H0H9 118 aa8.77□□□□□ -1.01
LINC01238-205ENST00000567549 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
LINC01238-205ENST00000567549 SPANXA2-OT1Q8N9U9 137 aa8.72□□□□□ -1.01
LINC01238-205ENST00000567549 SYNE2Q8WXH0 6885 aaKnown RBP8.66□□□□□ -1.02
LINC01238-205ENST00000567549 C4orf26Q17RF5 130 aa8.64□□□□□ -1.03
LINC01238-205ENST00000567549 KRTAP6-3Q3LI67 103 aa8.61□□□□□ -1.03
LINC01238-205ENST00000567549 RPS28P62857 69 aaKnown RBP8.58□□□□□ -1.04
LINC01238-205ENST00000567549 CSAG1Q6PB30 78 aa8.56□□□□□ -1.04
LINC01238-205ENST00000567549 SERP1Q9Y6X1 66 aa8.56□□□□□ -1.04
LINC01238-205ENST00000567549 S4R3F8 94 aa8.56□□□□□ -1.04
LINC01238-205ENST00000567549 ACYP2P14621 99 aa8.5□□□□□ -1.05
LINC01238-205ENST00000567549 Q5VV11 94 aa8.49□□□□□ -1.05
LINC01238-205ENST00000567549 A6NN06 94 aa8.48□□□□□ -1.05
LINC01238-205ENST00000567549 DMAC1Q96GE9 116 aa8.48□□□□□ -1.05
LINC01238-205ENST00000567549 A8MUN3 132 aa8.47□□□□□ -1.05
LINC01238-205ENST00000567549 LCA10Q71F78 164 aa8.42□□□□□ -1.06
LINC01238-205ENST00000567549 COA5Q86WW8 74 aa8.4□□□□□ -1.06
LINC01238-205ENST00000567549 SPRR2GQ9BYE4 73 aa8.4□□□□□ -1.06
LINC01238-205ENST00000567549 KRTAP3-1Q9BYR8 98 aa8.39□□□□□ -1.07
LINC01238-205ENST00000567549 KRTAP19-8Q3LI54 63 aa8.36□□□□□ -1.07
LINC01238-205ENST00000567549 SMIM26A0A096LP01 95 aa8.35□□□□□ -1.07
LINC01238-205ENST00000567549 CHKB-CPT1BH3BT56 60 aa8.34□□□□□ -1.07
LINC01238-205ENST00000567549 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
LINC01238-205ENST00000567549 MT1BP07438 61 aa8.33□□□□□ -1.08
LINC01238-205ENST00000567549 KRTAP10-5P60370 271 aa8.27□□□□□ -1.09
LINC01238-205ENST00000567549 SPTSSBQ8NFR3 76 aa8.25□□□□□ -1.09
LINC01238-205ENST00000567549 LOC100996750A0A140TA64 210 aa8.23□□□□□ -1.09
LINC01238-205ENST00000567549 KRTAP4-6Q9BYQ5 205 aa8.23□□□□□ -1.09
LINC01238-205ENST00000567549 V9GYY9 64 aa8.22□□□□□ -1.09
LINC01238-205ENST00000567549 NEBP20929 6669 aa8.2□□□□□ -1.1
LINC01238-205ENST00000567549 Q1T7F1 81 aa8.18□□□□□ -1.1
LINC01238-205ENST00000567549 H0YAA0 97 aa8.14□□□□□ -1.11
LINC01238-205ENST00000567549 MUC12Q9UKN1 5478 aa8.13□□□□□ -1.11
LINC01238-205ENST00000567549 KRTAP5-9P26371 169 aa8.1□□□□□ -1.11
LINC01238-205ENST00000567549 LINC01558Q9Y6Z2 57 aa8.1□□□□□ -1.11
LINC01238-205ENST00000567549 KRTAP20-1Q3LI63 56 aa8.09□□□□□ -1.11
LINC01238-205ENST00000567549 PRO2289Q9P1D8 64 aa8.06□□□□□ -1.12
LINC01238-205ENST00000567549 PRR15LQ9BU68 103 aa8.02□□□□□ -1.13
LINC01238-205ENST00000567549 SEC61GP60059 68 aa8.01□□□□□ -1.13
LINC01238-205ENST00000567549 A0A1B0GU69 56 aa7.98□□□□□ -1.13
LINC01238-205ENST00000567549 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
LINC01238-205ENST00000567549 PSPHP1O15172 72 aa7.96□□□□□ -1.14
LINC01238-205ENST00000567549 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
LINC01238-205ENST00000567549 KMT2DO14686 5537 aa7.93□□□□□ -1.14
LINC01238-205ENST00000567549 R4GN34 69 aa7.89□□□□□ -1.15
LINC01238-205ENST00000567549 MDN1Q9NU22 5596 aa7.89□□□□□ -1.15
LINC01238-205ENST00000567549 KRTAP2-3P0C7H8 128 aa7.84□□□□□ -1.15
LINC01238-205ENST00000567549 KRTAP2-4Q9BYR9 128 aa7.84□□□□□ -1.15
LINC01238-205ENST00000567549 SPRR2FQ96RM1 72 aa7.83□□□□□ -1.16
LINC01238-205ENST00000567549 SPRR2EP22531 72 aa7.78□□□□□ -1.16
LINC01238-205ENST00000567549 SPRR2BP35325 72 aa7.78□□□□□ -1.16
LINC01238-205ENST00000567549 SPRR2AP35326 72 aa7.78□□□□□ -1.16
LINC01238-205ENST00000567549 A6NED7 52 aa7.77□□□□□ -1.17
LINC01238-205ENST00000567549 MT1XP80297 61 aa7.77□□□□□ -1.17
LINC01238-205ENST00000567549 KRTAP8-1Q8IUC2 63 aa7.77□□□□□ -1.17
LINC01238-205ENST00000567549 M0QZ58 72 aa7.76□□□□□ -1.17
LINC01238-205ENST00000567549 UQCR11O14957 56 aa7.76□□□□□ -1.17
LINC01238-205ENST00000567549 KRTAP4-8Q9BYQ9 185 aa7.76□□□□□ -1.17
LINC01238-205ENST00000567549 A0A1B0GU33 70 aa7.75□□□□□ -1.17
LINC01238-205ENST00000567549 KRTAP12-2P59991 146 aa7.74□□□□□ -1.17
LINC01238-205ENST00000567549 KRTAP19-4Q3LI73 84 aa7.73□□□□□ -1.17
LINC01238-205ENST00000567549 P0C880 135 aa7.68□□□□□ -1.18
LINC01238-205ENST00000567549 MIR22HGQ0VDD5 57 aa7.65□□□□□ -1.18
LINC01238-205ENST00000567549 SPATA8Q6RVD6 105 aa7.65□□□□□ -1.18
LINC01238-205ENST00000567549 BRK1Q8WUW1 75 aa7.65□□□□□ -1.18
LINC01238-205ENST00000567549 KRTAP4-12Q9BQ66 201 aa7.65□□□□□ -1.18
LINC01238-205ENST00000567549 LINC01554Q52M75 96 aa7.64□□□□□ -1.19
LINC01238-205ENST00000567549 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
LINC01238-205ENST00000567549 LCE1AQ5T7P2 110 aa7.58□□□□□ -1.2
LINC01238-205ENST00000567549 KRTAP2-2Q9BYT5 123 aa7.57□□□□□ -1.2
LINC01238-205ENST00000567549 KRTAP2-1Q9BYU5 128 aa7.57□□□□□ -1.2
LINC01238-205ENST00000567549 SPRR2DP22532 72 aa7.54□□□□□ -1.2
LINC01238-205ENST00000567549 PRO0628Q9UI54 55 aa7.51□□□□□ -1.21
LINC01238-205ENST00000567549 KRTAP13-4Q3LI77 160 aa7.47□□□□□ -1.21
LINC01238-205ENST00000567549 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
LINC01238-205ENST00000567549 A8MU10 97 aa7.44□□□□□ -1.22
LINC01238-205ENST00000567549 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
LINC01238-205ENST00000567549 LCE3BQ5TA77 95 aa7.43□□□□□ -1.22
LINC01238-205ENST00000567549 KRTAP10-7P60409 375 aaPredicted RBP7.4□□□□□ -1.22
LINC01238-205ENST00000567549 K7ERS5 55 aa7.39□□□□□ -1.23
LINC01238-205ENST00000567549 A0A0D9SG42 100 aa7.38□□□□□ -1.23
LINC01238-205ENST00000567549 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
LINC01238-205ENST00000567549 PMAIP1Q13794 54 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms