RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	IGKV3D-7	A0A0C4DH55	119 aa		3.37	□□□□□ -1.87
MARK3-223	ENST00000561071	WFDC13	Q8IUB5	93 aa		3.37	□□□□□ -1.87
MARK3-223	ENST00000561071	C8orf17	Q9NRJ1	99 aa		3.37	□□□□□ -1.87
MARK3-223	ENST00000561071	MACF1	Q9UPN3	7388 aa	Known RBP	3.36	□□□□□ -1.87
MARK3-223	ENST00000561071	NDUFB1	O75438	58 aa		3.36	□□□□□ -1.87
MARK3-223	ENST00000561071	OBSCN	Q5VST9	7968 aa		3.35	□□□□□ -1.87
MARK3-223	ENST00000561071		A8MWP4	228 aa		3.35	□□□□□ -1.87
MARK3-223	ENST00000561071	C14orf132	Q9NPU4	83 aa		3.34	□□□□□ -1.87
MARK3-223	ENST00000561071	LOC110117498	A0A087WWA1	95 aa		3.33	□□□□□ -1.88
MARK3-223	ENST00000561071	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.33	□□□□□ -1.88
MARK3-223	ENST00000561071	ATXN8	Q156A1	80 aa		3.33	□□□□□ -1.88
MARK3-223	ENST00000561071	ETDB	Q3ZM63	59 aa		3.33	□□□□□ -1.88
MARK3-223	ENST00000561071	SEC61G	P60059	68 aa		3.32	□□□□□ -1.88
MARK3-223	ENST00000561071	PRR15	Q8IV56	129 aa		3.32	□□□□□ -1.88
MARK3-223	ENST00000561071	MMP24-AS1	A0A0U1RRL7	71 aa		3.31	□□□□□ -1.88
MARK3-223	ENST00000561071	NREP	Q16612	68 aa		3.31	□□□□□ -1.88
MARK3-223	ENST00000561071	KRTAP19-6	Q3LI70	58 aa		3.31	□□□□□ -1.88
MARK3-223	ENST00000561071	FAM240A	A0A1B0GVK7	77 aa		3.3	□□□□□ -1.88
MARK3-223	ENST00000561071		A0A1B0GW54	56 aa		3.29	□□□□□ -1.88
MARK3-223	ENST00000561071		H3BT86	120 aa		3.29	□□□□□ -1.88
MARK3-223	ENST00000561071		K7EQZ3	153 aa		3.29	□□□□□ -1.88
MARK3-223	ENST00000561071	NDUFS5	O43920	106 aa		3.29	□□□□□ -1.88
MARK3-223	ENST00000561071	PDE6G	P18545	87 aa		3.29	□□□□□ -1.88
MARK3-223	ENST00000561071	H1FX-AS1	Q4G0G2	97 aa		3.29	□□□□□ -1.88
MARK3-223	ENST00000561071	TMEM254	Q8TBM7	123 aa		3.29	□□□□□ -1.88
MARK3-223	ENST00000561071	MRPL34	Q9BQ48	92 aa	Known RBP	3.29	□□□□□ -1.88
MARK3-223	ENST00000561071	ANAPC13	Q9BS18	74 aa		3.29	□□□□□ -1.88
MARK3-223	ENST00000561071	hDV103S1	A0JD37	113 aa		3.28	□□□□□ -1.88
MARK3-223	ENST00000561071	ACYP1	P07311	99 aa		3.28	□□□□□ -1.88
MARK3-223	ENST00000561071		Q5W150	140 aa		3.28	□□□□□ -1.88
MARK3-223	ENST00000561071	IMUP	Q9GZP8	106 aa		3.28	□□□□□ -1.88
MARK3-223	ENST00000561071	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.27	□□□□□ -1.89
MARK3-223	ENST00000561071	MT-ATP8	P03928	68 aa		3.26	□□□□□ -1.89
MARK3-223	ENST00000561071	LINC00846	Q9NV44	126 aa		3.26	□□□□□ -1.89
MARK3-223	ENST00000561071	BPY2	O14599	106 aa		3.24	□□□□□ -1.89
MARK3-223	ENST00000561071	C4orf26	Q17RF5	130 aa		3.24	□□□□□ -1.89
MARK3-223	ENST00000561071	HCG22	E2RYF7	251 aa		3.22	□□□□□ -1.89
MARK3-223	ENST00000561071	CASC2	Q6XLA1	102 aa		3.22	□□□□□ -1.89
MARK3-223	ENST00000561071	C7orf65	Q6ZTY9	151 aa		3.22	□□□□□ -1.89
MARK3-223	ENST00000561071	LINC00643	Q86TS7	51 aa		3.21	□□□□□ -1.9
MARK3-223	ENST00000561071	KRTAP6-3	Q3LI67	103 aa		3.2	□□□□□ -1.9
MARK3-223	ENST00000561071	C5orf47	Q569G3	176 aa		3.2	□□□□□ -1.9
MARK3-223	ENST00000561071	KRTAP4-3	Q9BYR4	195 aa		3.2	□□□□□ -1.9
MARK3-223	ENST00000561071	SPRR5	A0A1B0GTR4	108 aa		3.19	□□□□□ -1.9
MARK3-223	ENST00000561071	UQCRQ	O14949	82 aa		3.19	□□□□□ -1.9
MARK3-223	ENST00000561071	NEB	P20929	6669 aa		3.18	□□□□□ -1.9
MARK3-223	ENST00000561071	ATOX1	O00244	68 aa		3.18	□□□□□ -1.9
MARK3-223	ENST00000561071	PP632	Q6XCG6	107 aa		3.18	□□□□□ -1.9
MARK3-223	ENST00000561071	RPS28	P62857	69 aa	Known RBP	3.17	□□□□□ -1.9
MARK3-223	ENST00000561071	FAM236A	A0A1B0GUQ0	79 aa		3.16	□□□□□ -1.9
MARK3-223	ENST00000561071	FAM236B	A0A1B0GV22	79 aa		3.16	□□□□□ -1.9
MARK3-223	ENST00000561071	CCDC179	H3BU77	68 aa		3.16	□□□□□ -1.9
MARK3-223	ENST00000561071	MT1B	P07438	61 aa		3.16	□□□□□ -1.9
MARK3-223	ENST00000561071	ATP5EP2	Q5VTU8	51 aa		3.16	□□□□□ -1.9
MARK3-223	ENST00000561071	COX7C	P15954	63 aa		3.15	□□□□□ -1.91
MARK3-223	ENST00000561071	HIST1H4A	P62805	103 aa	Known RBP	3.15	□□□□□ -1.91
MARK3-223	ENST00000561071	SMIM20	Q8N5G0	67 aa		3.15	□□□□□ -1.91
MARK3-223	ENST00000561071	C1orf64	Q8NEQ6	169 aa		3.15	□□□□□ -1.91
MARK3-223	ENST00000561071	TMEM258	P61165	79 aa		3.14	□□□□□ -1.91
MARK3-223	ENST00000561071	LCA10	Q71F78	164 aa		3.14	□□□□□ -1.91
MARK3-223	ENST00000561071		S4R3F8	94 aa		3.14	□□□□□ -1.91
MARK3-223	ENST00000561071		A6NN06	94 aa		3.13	□□□□□ -1.91
MARK3-223	ENST00000561071	CSAG1	Q6PB30	78 aa		3.13	□□□□□ -1.91
MARK3-223	ENST00000561071	KRTAP5-2	Q701N4	177 aa		3.13	□□□□□ -1.91
MARK3-223	ENST00000561071		Q5VV11	94 aa		3.12	□□□□□ -1.91
MARK3-223	ENST00000561071	UBL5	Q9BZL1	73 aa		3.12	□□□□□ -1.91
MARK3-223	ENST00000561071	KRTAP19-8	Q3LI54	63 aa		3.11	□□□□□ -1.91
MARK3-223	ENST00000561071	SERP2	Q8N6R1	65 aa		3.11	□□□□□ -1.91
MARK3-223	ENST00000561071	SPRR2G	Q9BYE4	73 aa		3.11	□□□□□ -1.91
MARK3-223	ENST00000561071	MUC12	Q9UKN1	5478 aa		3.1	□□□□□ -1.91
MARK3-223	ENST00000561071		A0A087WVE0	104 aa		3.1	□□□□□ -1.91
MARK3-223	ENST00000561071	KLKP1	Q107X0	134 aa		3.08	□□□□□ -1.92
MARK3-223	ENST00000561071	ATP5E	P56381	51 aa	Predicted RBP	3.07	□□□□□ -1.92
MARK3-223	ENST00000561071	TP53AIP1	Q9HCN2	124 aa		3.07	□□□□□ -1.92
MARK3-223	ENST00000561071	NDUFC1	O43677	76 aa		3.06	□□□□□ -1.92
MARK3-223	ENST00000561071	CYP4F30P	Q9H0H9	118 aa		3.06	□□□□□ -1.92
MARK3-223	ENST00000561071	MDN1	Q9NU22	5596 aa		3.04	□□□□□ -1.92
MARK3-223	ENST00000561071	SERP1	Q9Y6X1	66 aa		3.04	□□□□□ -1.92
MARK3-223	ENST00000561071	KMT2D	O14686	5537 aa		3.04	□□□□□ -1.92
MARK3-223	ENST00000561071	TRAV7	A0A075B6U4	112 aa		3.03	□□□□□ -1.92
MARK3-223	ENST00000561071	LCE1C	Q5T751	118 aa		3.02	□□□□□ -1.93
MARK3-223	ENST00000561071	LCE1B	Q5T7P3	118 aa		3.02	□□□□□ -1.93
MARK3-223	ENST00000561071	KRTAP20-1	Q3LI63	56 aa		3.01	□□□□□ -1.93
MARK3-223	ENST00000561071	SMIM26	A0A096LP01	95 aa		3	□□□□□ -1.93
MARK3-223	ENST00000561071	TRAV22	A0A0B4J277	110 aa		3	□□□□□ -1.93
MARK3-223	ENST00000561071	LOC101927531	A0A1B0GV80	90 aa		3	□□□□□ -1.93
MARK3-223	ENST00000561071	CRIPT	Q9P021	101 aa		2.99	□□□□□ -1.93
MARK3-223	ENST00000561071	PRO0628	Q9UI54	55 aa		2.99	□□□□□ -1.93
MARK3-223	ENST00000561071		H0Y9P7	68 aa		2.98	□□□□□ -1.93
MARK3-223	ENST00000561071		H7BZZ5	65 aa		2.98	□□□□□ -1.93
MARK3-223	ENST00000561071	C20orf197	Q8N268	126 aa		2.98	□□□□□ -1.93
MARK3-223	ENST00000561071	ADM2	Q7Z4H4	148 aa		2.97	□□□□□ -1.93
MARK3-223	ENST00000561071	CYSTM1	Q9H1C7	97 aa		2.96	□□□□□ -1.94
MARK3-223	ENST00000561071		H0YAA0	97 aa		2.94	□□□□□ -1.94
MARK3-223	ENST00000561071	MT1X	P80297	61 aa		2.94	□□□□□ -1.94
MARK3-223	ENST00000561071		A8MUN3	132 aa		2.93	□□□□□ -1.94
MARK3-223	ENST00000561071	LINC00208	Q96KT6	92 aa		2.93	□□□□□ -1.94
MARK3-223	ENST00000561071	SPRR2F	Q96RM1	72 aa		2.93	□□□□□ -1.94
MARK3-223	ENST00000561071	KRTAP2-3	P0C7H8	128 aa		2.91	□□□□□ -1.94
MARK3-223	ENST00000561071	SPRR2E	P22531	72 aa		2.91	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms