RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 A0A0G2JQZ4 141 aa3.08□□□□□ -1.92
USP3-215ENST00000559771 A8MWP4 228 aa3.08□□□□□ -1.92
USP3-215ENST00000559771 H3BPC8 53 aa3.08□□□□□ -1.92
USP3-215ENST00000559771 NDUFB1O75438 58 aa3.08□□□□□ -1.92
USP3-215ENST00000559771 CYSTM1Q9H1C7 97 aa3.08□□□□□ -1.92
USP3-215ENST00000559771 LINC00472Q9H8W2 130 aa3.08□□□□□ -1.92
USP3-215ENST00000559771 K7EQZ3 153 aa3.07□□□□□ -1.92
USP3-215ENST00000559771 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
USP3-215ENST00000559771 C1orf195Q5TG92 126 aa3.07□□□□□ -1.92
USP3-215ENST00000559771 Q5XG85 94 aa3.07□□□□□ -1.92
USP3-215ENST00000559771 PRR15Q8IV56 129 aa3.07□□□□□ -1.92
USP3-215ENST00000559771 Q8N9L7 120 aa3.07□□□□□ -1.92
USP3-215ENST00000559771 LIMD2Q9BT23 127 aa3.07□□□□□ -1.92
USP3-215ENST00000559771 RPL37P61927 97 aaKnown RBP3.06□□□□□ -1.92
USP3-215ENST00000559771 CD164Q04900 197 aa3.06□□□□□ -1.92
USP3-215ENST00000559771 MP68P56378 58 aa3.05□□□□□ -1.92
USP3-215ENST00000559771 TP53AIP1Q9HCN2 124 aa3.05□□□□□ -1.92
USP3-215ENST00000559771 SNURFQ9Y675 71 aa3.05□□□□□ -1.92
USP3-215ENST00000559771 SMIM26A0A096LP01 95 aa3.04□□□□□ -1.92
USP3-215ENST00000559771 ZCCHC13Q8WW36 166 aaKnown RBP3.04□□□□□ -1.92
USP3-215ENST00000559771 USH2AO75445 5202 aa3.03□□□□□ -1.92
USP3-215ENST00000559771 hDV103S1A0JD37 113 aa3.03□□□□□ -1.92
USP3-215ENST00000559771 CASC2Q6XLA1 102 aa3.03□□□□□ -1.92
USP3-215ENST00000559771 SSPOA2VEC9 5147 aa3.03□□□□□ -1.93
USP3-215ENST00000559771 M0R2T5 61 aa3.02□□□□□ -1.93
USP3-215ENST00000559771 Q75L30 129 aa3.02□□□□□ -1.93
USP3-215ENST00000559771 SPANXA2-OT1Q8N9U9 137 aa3.02□□□□□ -1.93
USP3-215ENST00000559771 CYP4F30PQ9H0H9 118 aa3.01□□□□□ -1.93
USP3-215ENST00000559771 A0A1B0GVX0 72 aa3□□□□□ -1.93
USP3-215ENST00000559771 WFDC13Q8IUB5 93 aa3□□□□□ -1.93
USP3-215ENST00000559771 Q96NJ1 140 aa3□□□□□ -1.93
USP3-215ENST00000559771 TRAV22A0A0B4J277 110 aa2.99□□□□□ -1.93
USP3-215ENST00000559771 MMP24-AS1A0A0U1RRL7 71 aa2.99□□□□□ -1.93
USP3-215ENST00000559771 C8orf87E5RJ46 101 aa2.99□□□□□ -1.93
USP3-215ENST00000559771 DEFB116Q30KQ4 102 aa2.99□□□□□ -1.93
USP3-215ENST00000559771 COX6B2Q6YFQ2 88 aa2.99□□□□□ -1.93
USP3-215ENST00000559771 H0Y9P7 68 aa2.98□□□□□ -1.93
USP3-215ENST00000559771 C8orf17Q9NRJ1 99 aa2.98□□□□□ -1.93
USP3-215ENST00000559771 C1orf64Q8NEQ6 169 aa2.97□□□□□ -1.93
USP3-215ENST00000559771 LINC00208Q96KT6 92 aa2.97□□□□□ -1.93
USP3-215ENST00000559771 MRPL34Q9BQ48 92 aaKnown RBP2.97□□□□□ -1.93
USP3-215ENST00000559771 V9GYY9 64 aa2.97□□□□□ -1.93
USP3-215ENST00000559771 FCGBPQ9Y6R7 5405 aaPredicted RBP2.96□□□□□ -1.94
USP3-215ENST00000559771 IGHV6-1A0A0B4J1U7 121 aa2.94□□□□□ -1.94
USP3-215ENST00000559771 LOC101927531A0A1B0GV80 90 aa2.94□□□□□ -1.94
USP3-215ENST00000559771 MT2AP02795 61 aa2.94□□□□□ -1.94
USP3-215ENST00000559771 Q1T7F1 81 aa2.94□□□□□ -1.94
USP3-215ENST00000559771 KRTAP16-1A8MUX0 517 aa2.93□□□□□ -1.94
USP3-215ENST00000559771 C4orf26Q17RF5 130 aa2.93□□□□□ -1.94
USP3-215ENST00000559771 ATP11AUNQ6ZP68 121 aa2.93□□□□□ -1.94
USP3-215ENST00000559771 C20orf166-AS1Q96NR2 134 aa2.93□□□□□ -1.94
USP3-215ENST00000559771 A8MUU9 505 aa2.92□□□□□ -1.94
USP3-215ENST00000559771 NDUFS5O43920 106 aa2.92□□□□□ -1.94
USP3-215ENST00000559771 MT1FP04733 61 aa2.92□□□□□ -1.94
USP3-215ENST00000559771 MT3P25713 68 aa2.92□□□□□ -1.94
USP3-215ENST00000559771 LINC00313P59037 77 aa2.92□□□□□ -1.94
USP3-215ENST00000559771 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
USP3-215ENST00000559771 IGKV2D-30A0A075B6S6 120 aa2.9□□□□□ -1.95
USP3-215ENST00000559771 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
USP3-215ENST00000559771 SYNE2Q8WXH0 6885 aaKnown RBP2.9□□□□□ -1.95
USP3-215ENST00000559771 PRO0628Q9UI54 55 aa2.89□□□□□ -1.95
USP3-215ENST00000559771 HRES1P13985 223 aa2.88□□□□□ -1.95
USP3-215ENST00000559771 NOTCH2NLQ7Z3S9 236 aa2.87□□□□□ -1.95
USP3-215ENST00000559771 ACYP2P14621 99 aa2.86□□□□□ -1.95
USP3-215ENST00000559771 COA5Q86WW8 74 aa2.86□□□□□ -1.95
USP3-215ENST00000559771 Q5W150 140 aa2.85□□□□□ -1.95
USP3-215ENST00000559771 KRTAP10-10P60014 251 aa2.84□□□□□ -1.95
USP3-215ENST00000559771 DMAC1Q96GE9 116 aa2.84□□□□□ -1.95
USP3-215ENST00000559771 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
USP3-215ENST00000559771 LINC01558Q9Y6Z2 57 aa2.83□□□□□ -1.96
USP3-215ENST00000559771 A8MUN3 132 aa2.82□□□□□ -1.96
USP3-215ENST00000559771 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
USP3-215ENST00000559771 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
USP3-215ENST00000559771 PSPHP1O15172 72 aa2.8□□□□□ -1.96
USP3-215ENST00000559771 Q5VV11 94 aa2.8□□□□□ -1.96
USP3-215ENST00000559771 CHKB-CPT1BH3BT56 60 aa2.79□□□□□ -1.96
USP3-215ENST00000559771 C7orf65Q6ZTY9 151 aa2.79□□□□□ -1.96
USP3-215ENST00000559771 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
USP3-215ENST00000559771 PRR15LQ9BU68 103 aa2.79□□□□□ -1.96
USP3-215ENST00000559771 RBM12B-AS1Q9P1G2 102 aa2.79□□□□□ -1.96
USP3-215ENST00000559771 SPTSSBQ8NFR3 76 aa2.77□□□□□ -1.97
USP3-215ENST00000559771 SPINK7P58062 85 aa2.76□□□□□ -1.97
USP3-215ENST00000559771 CDC42SE1Q9NRR8 79 aa2.76□□□□□ -1.97
USP3-215ENST00000559771 A6NED7 52 aa2.75□□□□□ -1.97
USP3-215ENST00000559771 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
USP3-215ENST00000559771 PRAC1Q96KF2 57 aa2.74□□□□□ -1.97
USP3-215ENST00000559771 A0A1B0GU69 56 aa2.73□□□□□ -1.97
USP3-215ENST00000559771 NEBP20929 6669 aa2.72□□□□□ -1.97
USP3-215ENST00000559771 SEC61GP60059 68 aa2.71□□□□□ -1.98
USP3-215ENST00000559771 LCA10Q71F78 164 aa2.71□□□□□ -1.98
USP3-215ENST00000559771 UQCR11O14957 56 aa2.7□□□□□ -1.98
USP3-215ENST00000559771 PMAIP1Q13794 54 aa2.7□□□□□ -1.98
USP3-215ENST00000559771 LCE3CQ5T5A8 94 aa2.7□□□□□ -1.98
USP3-215ENST00000559771 SPATA8Q6RVD6 105 aa2.69□□□□□ -1.98
USP3-215ENST00000559771 MUC12Q9UKN1 5478 aa2.68□□□□□ -1.98
USP3-215ENST00000559771 MT1BP07438 61 aa2.66□□□□□ -1.98
USP3-215ENST00000559771 H1FX-AS1Q4G0G2 97 aa2.66□□□□□ -1.98
USP3-215ENST00000559771 A6NN06 94 aa2.65□□□□□ -1.99
USP3-215ENST00000559771 MIR22HGQ0VDD5 57 aa2.65□□□□□ -1.99
USP3-215ENST00000559771 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms