RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 HIST1H4AP62805 103 aaKnown RBP5.13□□□□□ -1.59
HERC1-204ENST00000559715 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
HERC1-204ENST00000559715 C7orf65Q6ZTY9 151 aa5.11□□□□□ -1.59
HERC1-204ENST00000559715 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
HERC1-204ENST00000559715 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
HERC1-204ENST00000559715 A0A087WVE0 104 aa5.09□□□□□ -1.59
HERC1-204ENST00000559715 MT1BP07438 61 aa5.09□□□□□ -1.59
HERC1-204ENST00000559715 IGKV2D-30A0A075B6S6 120 aa5.07□□□□□ -1.6
HERC1-204ENST00000559715 IGKV2-30P06310 120 aa5.07□□□□□ -1.6
HERC1-204ENST00000559715 MDN1Q9NU22 5596 aa5.07□□□□□ -1.6
HERC1-204ENST00000559715 KMT2DO14686 5537 aa5.07□□□□□ -1.6
HERC1-204ENST00000559715 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
HERC1-204ENST00000559715 IMUPQ9GZP8 106 aa5.06□□□□□ -1.6
HERC1-204ENST00000559715 TRAV22A0A0B4J277 110 aa5.05□□□□□ -1.6
HERC1-204ENST00000559715 UQCRQO14949 82 aa5.05□□□□□ -1.6
HERC1-204ENST00000559715 SCGB1A1P11684 91 aa5.05□□□□□ -1.6
HERC1-204ENST00000559715 PCP4P48539 62 aa5.05□□□□□ -1.6
HERC1-204ENST00000559715 MT-ATP8P03928 68 aa5.03□□□□□ -1.6
HERC1-204ENST00000559715 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
HERC1-204ENST00000559715 OCR1Q9BZK8 76 aa5.02□□□□□ -1.61
HERC1-204ENST00000559715 LOC101927531A0A1B0GV80 90 aa5.01□□□□□ -1.61
HERC1-204ENST00000559715 ATOX1O00244 68 aa5.01□□□□□ -1.61
HERC1-204ENST00000559715 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
HERC1-204ENST00000559715 A6NN06 94 aa5□□□□□ -1.61
HERC1-204ENST00000559715 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
HERC1-204ENST00000559715 SPRR2GQ9BYE4 73 aa4.99□□□□□ -1.61
HERC1-204ENST00000559715 H0Y9P7 68 aa4.98□□□□□ -1.61
HERC1-204ENST00000559715 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
HERC1-204ENST00000559715 CYP4F30PQ9H0H9 118 aa4.98□□□□□ -1.61
HERC1-204ENST00000559715 C4orf26Q17RF5 130 aa4.96□□□□□ -1.62
HERC1-204ENST00000559715 H3BPC8 53 aa4.94□□□□□ -1.62
HERC1-204ENST00000559715 MP68P56378 58 aa4.94□□□□□ -1.62
HERC1-204ENST00000559715 C5orf47Q569G3 176 aa4.94□□□□□ -1.62
HERC1-204ENST00000559715 FAM236AA0A1B0GUQ0 79 aa4.93□□□□□ -1.62
HERC1-204ENST00000559715 FAM236BA0A1B0GV22 79 aa4.93□□□□□ -1.62
HERC1-204ENST00000559715 Q5VV11 94 aa4.93□□□□□ -1.62
HERC1-204ENST00000559715 C1orf64Q8NEQ6 169 aa4.93□□□□□ -1.62
HERC1-204ENST00000559715 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
HERC1-204ENST00000559715 SMIM20Q8N5G0 67 aa4.92□□□□□ -1.62
HERC1-204ENST00000559715 LINC00208Q96KT6 92 aa4.91□□□□□ -1.62
HERC1-204ENST00000559715 TRAV7A0A075B6U4 112 aa4.88□□□□□ -1.63
HERC1-204ENST00000559715 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
HERC1-204ENST00000559715 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
HERC1-204ENST00000559715 A8MUN3 132 aa4.85□□□□□ -1.63
HERC1-204ENST00000559715 KLKP1Q107X0 134 aa4.85□□□□□ -1.63
HERC1-204ENST00000559715 LCA10Q71F78 164 aa4.85□□□□□ -1.63
HERC1-204ENST00000559715 S4R3F8 94 aa4.83□□□□□ -1.64
HERC1-204ENST00000559715 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
HERC1-204ENST00000559715 CSAG1Q6PB30 78 aa4.82□□□□□ -1.64
HERC1-204ENST00000559715 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
HERC1-204ENST00000559715 SERP2Q8N6R1 65 aa4.81□□□□□ -1.64
HERC1-204ENST00000559715 ANAPC13Q9BS18 74 aa4.78□□□□□ -1.64
HERC1-204ENST00000559715 DMAC1Q96GE9 116 aa4.77□□□□□ -1.65
HERC1-204ENST00000559715 COX7CP15954 63 aa4.76□□□□□ -1.65
HERC1-204ENST00000559715 C20orf197Q8N268 126 aa4.73□□□□□ -1.65
HERC1-204ENST00000559715 NDUFC1O43677 76 aa4.72□□□□□ -1.65
HERC1-204ENST00000559715 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
HERC1-204ENST00000559715 SNURFQ9Y675 71 aa4.72□□□□□ -1.65
HERC1-204ENST00000559715 CRIPTQ9P021 101 aa4.71□□□□□ -1.66
HERC1-204ENST00000559715 SPRR2EP22531 72 aa4.7□□□□□ -1.66
HERC1-204ENST00000559715 SPRR2BP35325 72 aa4.7□□□□□ -1.66
HERC1-204ENST00000559715 SPRR2AP35326 72 aa4.7□□□□□ -1.66
HERC1-204ENST00000559715 MT1XP80297 61 aa4.7□□□□□ -1.66
HERC1-204ENST00000559715 SPANXA2-OT1Q8N9U9 137 aa4.7□□□□□ -1.66
HERC1-204ENST00000559715 H0YAA0 97 aa4.69□□□□□ -1.66
HERC1-204ENST00000559715 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
HERC1-204ENST00000559715 ACYP2P14621 99 aa4.66□□□□□ -1.66
HERC1-204ENST00000559715 CCDC179H3BU77 68 aa4.65□□□□□ -1.67
HERC1-204ENST00000559715 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
HERC1-204ENST00000559715 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.67
HERC1-204ENST00000559715 H7BZZ5 65 aa4.61□□□□□ -1.67
HERC1-204ENST00000559715 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
HERC1-204ENST00000559715 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
HERC1-204ENST00000559715 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
HERC1-204ENST00000559715 CYSTM1Q9H1C7 97 aa4.59□□□□□ -1.67
HERC1-204ENST00000559715 SPTSSBQ8NFR3 76 aa4.58□□□□□ -1.68
HERC1-204ENST00000559715 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
HERC1-204ENST00000559715 CHKB-CPT1BH3BT56 60 aa4.56□□□□□ -1.68
HERC1-204ENST00000559715 ADM2Q7Z4H4 148 aa4.56□□□□□ -1.68
HERC1-204ENST00000559715 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
HERC1-204ENST00000559715 SPRR2DP22532 72 aa4.54□□□□□ -1.68
HERC1-204ENST00000559715 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
HERC1-204ENST00000559715 TMEM258P61165 79 aa4.53□□□□□ -1.68
HERC1-204ENST00000559715 COA5Q86WW8 74 aa4.52□□□□□ -1.69
HERC1-204ENST00000559715 P0C880 135 aa4.49□□□□□ -1.69
HERC1-204ENST00000559715 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
HERC1-204ENST00000559715 PLAC4Q8WY50 150 aa4.47□□□□□ -1.69
HERC1-204ENST00000559715 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
HERC1-204ENST00000559715 R4GN34 69 aa4.43□□□□□ -1.7
HERC1-204ENST00000559715 SERP1Q9Y6X1 66 aa4.41□□□□□ -1.7
HERC1-204ENST00000559715 M0QZ58 72 aa4.4□□□□□ -1.71
HERC1-204ENST00000559715 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
HERC1-204ENST00000559715 SEC61GP60059 68 aa4.35□□□□□ -1.71
HERC1-204ENST00000559715 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.71
HERC1-204ENST00000559715 SMIM26A0A096LP01 95 aa4.34□□□□□ -1.71
HERC1-204ENST00000559715 KRTAP13-4Q3LI77 160 aa4.29□□□□□ -1.72
HERC1-204ENST00000559715 LINC01554Q52M75 96 aa4.29□□□□□ -1.72
HERC1-204ENST00000559715 A0A1B0GU69 56 aa4.27□□□□□ -1.73
HERC1-204ENST00000559715 A0A1B0GU33 70 aa4.26□□□□□ -1.73
HERC1-204ENST00000559715 LINC01558Q9Y6Z2 57 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms