RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 K7ERU9 68 aa5.58□□□□□ -1.52
SRP54-203ENST00000553544 KRTAP20-1Q3LI63 56 aa5.58□□□□□ -1.52
SRP54-203ENST00000553544 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
SRP54-203ENST00000553544 A0A087WVE0 104 aa5.54□□□□□ -1.52
SRP54-203ENST00000553544 C4orf26Q17RF5 130 aa5.54□□□□□ -1.52
SRP54-203ENST00000553544 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
SRP54-203ENST00000553544 H0Y9P7 68 aa5.52□□□□□ -1.53
SRP54-203ENST00000553544 MP68P56378 58 aa5.52□□□□□ -1.53
SRP54-203ENST00000553544 IMUPQ9GZP8 106 aa5.52□□□□□ -1.53
SRP54-203ENST00000553544 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
SRP54-203ENST00000553544 SCGB1A1P11684 91 aa5.51□□□□□ -1.53
SRP54-203ENST00000553544 CYP4F30PQ9H0H9 118 aa5.51□□□□□ -1.53
SRP54-203ENST00000553544 C1orf64Q8NEQ6 169 aa5.5□□□□□ -1.53
SRP54-203ENST00000553544 C5orf47Q569G3 176 aa5.48□□□□□ -1.53
SRP54-203ENST00000553544 A6NN06 94 aa5.47□□□□□ -1.53
SRP54-203ENST00000553544 H3BPC8 53 aa5.47□□□□□ -1.53
SRP54-203ENST00000553544 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
SRP54-203ENST00000553544 OCR1Q9BZK8 76 aa5.46□□□□□ -1.54
SRP54-203ENST00000553544 S4R3F8 94 aa5.46□□□□□ -1.54
SRP54-203ENST00000553544 SMIM20Q8N5G0 67 aa5.44□□□□□ -1.54
SRP54-203ENST00000553544 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
SRP54-203ENST00000553544 A8MUN3 132 aa5.43□□□□□ -1.54
SRP54-203ENST00000553544 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
SRP54-203ENST00000553544 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
SRP54-203ENST00000553544 KRTAP5-9P26371 169 aa5.39□□□□□ -1.55
SRP54-203ENST00000553544 MT-ATP8P03928 68 aa5.38□□□□□ -1.55
SRP54-203ENST00000553544 FAM236AA0A1B0GUQ0 79 aa5.37□□□□□ -1.55
SRP54-203ENST00000553544 FAM236BA0A1B0GV22 79 aa5.37□□□□□ -1.55
SRP54-203ENST00000553544 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
SRP54-203ENST00000553544 LCA10Q71F78 164 aa5.36□□□□□ -1.55
SRP54-203ENST00000553544 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
SRP54-203ENST00000553544 MDN1Q9NU22 5596 aa5.34□□□□□ -1.55
SRP54-203ENST00000553544 KMT2DO14686 5537 aa5.34□□□□□ -1.55
SRP54-203ENST00000553544 TRAV7A0A075B6U4 112 aa5.34□□□□□ -1.55
SRP54-203ENST00000553544 Q5VV11 94 aa5.34□□□□□ -1.55
SRP54-203ENST00000553544 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
SRP54-203ENST00000553544 NDUFC1O43677 76 aa5.33□□□□□ -1.56
SRP54-203ENST00000553544 MT1BP07438 61 aa5.32□□□□□ -1.56
SRP54-203ENST00000553544 KRTAP10-5P60370 271 aa5.3□□□□□ -1.56
SRP54-203ENST00000553544 KLKP1Q107X0 134 aa5.3□□□□□ -1.56
SRP54-203ENST00000553544 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
SRP54-203ENST00000553544 SPRR2GQ9BYE4 73 aa5.29□□□□□ -1.56
SRP54-203ENST00000553544 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
SRP54-203ENST00000553544 DMAC1Q96GE9 116 aa5.26□□□□□ -1.57
SRP54-203ENST00000553544 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
SRP54-203ENST00000553544 SERP2Q8N6R1 65 aa5.23□□□□□ -1.57
SRP54-203ENST00000553544 H0YAA0 97 aa5.22□□□□□ -1.57
SRP54-203ENST00000553544 CRIPTQ9P021 101 aa5.22□□□□□ -1.57
SRP54-203ENST00000553544 ACYP2P14621 99 aa5.21□□□□□ -1.58
SRP54-203ENST00000553544 SPTSSBQ8NFR3 76 aa5.19□□□□□ -1.58
SRP54-203ENST00000553544 C20orf197Q8N268 126 aa5.18□□□□□ -1.58
SRP54-203ENST00000553544 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
SRP54-203ENST00000553544 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
SRP54-203ENST00000553544 SPRR2EP22531 72 aa5.16□□□□□ -1.58
SRP54-203ENST00000553544 SPRR2BP35325 72 aa5.16□□□□□ -1.58
SRP54-203ENST00000553544 SPRR2AP35326 72 aa5.16□□□□□ -1.58
SRP54-203ENST00000553544 SPANXA2-OT1Q8N9U9 137 aa5.16□□□□□ -1.58
SRP54-203ENST00000553544 SNURFQ9Y675 71 aa5.16□□□□□ -1.58
SRP54-203ENST00000553544 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
SRP54-203ENST00000553544 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
SRP54-203ENST00000553544 ADM2Q7Z4H4 148 aa5.11□□□□□ -1.59
SRP54-203ENST00000553544 COX7CP15954 63 aa5.1□□□□□ -1.59
SRP54-203ENST00000553544 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
SRP54-203ENST00000553544 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
SRP54-203ENST00000553544 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
SRP54-203ENST00000553544 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
SRP54-203ENST00000553544 R4GN34 69 aa5.04□□□□□ -1.6
SRP54-203ENST00000553544 ANAPC13Q9BS18 74 aa5.03□□□□□ -1.6
SRP54-203ENST00000553544 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
SRP54-203ENST00000553544 SPRR2DP22532 72 aa5□□□□□ -1.61
SRP54-203ENST00000553544 PRO2289Q9P1D8 64 aa5□□□□□ -1.61
SRP54-203ENST00000553544 M0QZ58 72 aa4.97□□□□□ -1.61
SRP54-203ENST00000553544 P0C880 135 aa4.96□□□□□ -1.62
SRP54-203ENST00000553544 COA5Q86WW8 74 aa4.96□□□□□ -1.62
SRP54-203ENST00000553544 H7BZZ5 65 aa4.95□□□□□ -1.62
SRP54-203ENST00000553544 PLAC4Q8WY50 150 aa4.94□□□□□ -1.62
SRP54-203ENST00000553544 SEC61GP60059 68 aa4.93□□□□□ -1.62
SRP54-203ENST00000553544 MT1XP80297 61 aa4.93□□□□□ -1.62
SRP54-203ENST00000553544 ATP5EP56381 51 aaPredicted RBP4.91□□□□□ -1.62
SRP54-203ENST00000553544 SERP1Q9Y6X1 66 aa4.89□□□□□ -1.63
SRP54-203ENST00000553544 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
SRP54-203ENST00000553544 GPR98Q8WXG9 6306 aa4.87□□□□□ -1.63
SRP54-203ENST00000553544 LINC01554Q52M75 96 aa4.86□□□□□ -1.63
SRP54-203ENST00000553544 CYSTM1Q9H1C7 97 aa4.85□□□□□ -1.63
SRP54-203ENST00000553544 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
SRP54-203ENST00000553544 TMEM258P61165 79 aa4.79□□□□□ -1.64
SRP54-203ENST00000553544 A0A1B0GU69 56 aa4.75□□□□□ -1.65
SRP54-203ENST00000553544 PRR15LQ9BU68 103 aa4.74□□□□□ -1.65
SRP54-203ENST00000553544 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
SRP54-203ENST00000553544 A0A1B0GU33 70 aa4.72□□□□□ -1.65
SRP54-203ENST00000553544 KRTAP10-7P60409 375 aaPredicted RBP4.7□□□□□ -1.66
SRP54-203ENST00000553544 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
SRP54-203ENST00000553544 KRTAP13-4Q3LI77 160 aa4.67□□□□□ -1.66
SRP54-203ENST00000553544 CAMK2N1Q7Z7J9 78 aa4.67□□□□□ -1.66
SRP54-203ENST00000553544 SMIM26A0A096LP01 95 aa4.66□□□□□ -1.66
SRP54-203ENST00000553544 A0A0D9SG42 100 aa4.62□□□□□ -1.67
SRP54-203ENST00000553544 SPATA8Q6RVD6 105 aa4.61□□□□□ -1.67
SRP54-203ENST00000553544 LINC01558Q9Y6Z2 57 aa4.61□□□□□ -1.67
SRP54-203ENST00000553544 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
SRP54-203ENST00000553544 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms