RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 BPY2O14599 106 aa3.43□□□□□ -1.86
DEPDC4-210ENST00000551642 IGHV6-1A0A0B4J1U7 121 aa3.42□□□□□ -1.86
DEPDC4-210ENST00000551642 IGKV3D-7A0A0C4DH55 119 aa3.42□□□□□ -1.86
DEPDC4-210ENST00000551642 C8orf87E5RJ46 101 aa3.42□□□□□ -1.86
DEPDC4-210ENST00000551642 LINC00313P59037 77 aa3.42□□□□□ -1.86
DEPDC4-210ENST00000551642 CXCL6P80162 114 aa3.42□□□□□ -1.86
DEPDC4-210ENST00000551642 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
DEPDC4-210ENST00000551642 PRR15Q8IV56 129 aa3.42□□□□□ -1.86
DEPDC4-210ENST00000551642 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
DEPDC4-210ENST00000551642 K7EQZ3 153 aa3.4□□□□□ -1.87
DEPDC4-210ENST00000551642 K7ERU9 68 aa3.4□□□□□ -1.87
DEPDC4-210ENST00000551642 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
DEPDC4-210ENST00000551642 ATP5EP2Q5VTU8 51 aa3.4□□□□□ -1.87
DEPDC4-210ENST00000551642 LINC00643Q86TS7 51 aa3.4□□□□□ -1.87
DEPDC4-210ENST00000551642 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
DEPDC4-210ENST00000551642 OCR1Q9BZK8 76 aa3.4□□□□□ -1.87
DEPDC4-210ENST00000551642 C20orf166-AS1Q96NR2 134 aa3.39□□□□□ -1.87
DEPDC4-210ENST00000551642 C8orf17Q9NRJ1 99 aa3.39□□□□□ -1.87
DEPDC4-210ENST00000551642 MMP24-AS1A0A0U1RRL7 71 aa3.38□□□□□ -1.87
DEPDC4-210ENST00000551642 A8MUU9 505 aa3.38□□□□□ -1.87
DEPDC4-210ENST00000551642 RPL37P61927 97 aaKnown RBP3.38□□□□□ -1.87
DEPDC4-210ENST00000551642 Q8N9L7 120 aa3.38□□□□□ -1.87
DEPDC4-210ENST00000551642 hDV103S1A0JD37 113 aa3.36□□□□□ -1.87
DEPDC4-210ENST00000551642 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
DEPDC4-210ENST00000551642 TMEM254Q8TBM7 123 aa3.36□□□□□ -1.87
DEPDC4-210ENST00000551642 HCG22E2RYF7 251 aa3.35□□□□□ -1.87
DEPDC4-210ENST00000551642 CASC2Q6XLA1 102 aa3.35□□□□□ -1.87
DEPDC4-210ENST00000551642 MRPL34Q9BQ48 92 aaKnown RBP3.35□□□□□ -1.87
DEPDC4-210ENST00000551642 HIST1H4AP62805 103 aaKnown RBP3.33□□□□□ -1.88
DEPDC4-210ENST00000551642 PCOTHQ58A44 107 aa3.33□□□□□ -1.88
DEPDC4-210ENST00000551642 ATP11AUNQ6ZP68 121 aa3.33□□□□□ -1.88
DEPDC4-210ENST00000551642 WFDC13Q8IUB5 93 aa3.33□□□□□ -1.88
DEPDC4-210ENST00000551642 IMUPQ9GZP8 106 aa3.32□□□□□ -1.88
DEPDC4-210ENST00000551642 ZCCHC13Q8WW36 166 aaKnown RBP3.31□□□□□ -1.88
DEPDC4-210ENST00000551642 A0A087WVE0 104 aa3.3□□□□□ -1.88
DEPDC4-210ENST00000551642 NDUFS5O43920 106 aa3.3□□□□□ -1.88
DEPDC4-210ENST00000551642 MT2AP02795 61 aa3.29□□□□□ -1.88
DEPDC4-210ENST00000551642 MT-ATP8P03928 68 aa3.29□□□□□ -1.88
DEPDC4-210ENST00000551642 TP53AIP1Q9HCN2 124 aa3.29□□□□□ -1.88
DEPDC4-210ENST00000551642 MT1FP04733 61 aa3.27□□□□□ -1.89
DEPDC4-210ENST00000551642 Q5W150 140 aa3.27□□□□□ -1.89
DEPDC4-210ENST00000551642 COX6B2Q6YFQ2 88 aa3.25□□□□□ -1.89
DEPDC4-210ENST00000551642 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
DEPDC4-210ENST00000551642 UQCRQO14949 82 aa3.24□□□□□ -1.89
DEPDC4-210ENST00000551642 SPINK7P58062 85 aa3.24□□□□□ -1.89
DEPDC4-210ENST00000551642 TRAV22A0A0B4J277 110 aa3.23□□□□□ -1.89
DEPDC4-210ENST00000551642 SEC61GP60059 68 aa3.23□□□□□ -1.89
DEPDC4-210ENST00000551642 FAM236AA0A1B0GUQ0 79 aa3.22□□□□□ -1.89
DEPDC4-210ENST00000551642 FAM236BA0A1B0GV22 79 aa3.22□□□□□ -1.89
DEPDC4-210ENST00000551642 SCGB1A1P11684 91 aa3.22□□□□□ -1.89
DEPDC4-210ENST00000551642 C7orf65Q6ZTY9 151 aa3.22□□□□□ -1.89
DEPDC4-210ENST00000551642 ATOX1O00244 68 aa3.21□□□□□ -1.9
DEPDC4-210ENST00000551642 HRES1P13985 223 aa3.21□□□□□ -1.9
DEPDC4-210ENST00000551642 SMIM20Q8N5G0 67 aa3.21□□□□□ -1.9
DEPDC4-210ENST00000551642 H0Y9P7 68 aa3.2□□□□□ -1.9
DEPDC4-210ENST00000551642 C5orf47Q569G3 176 aa3.2□□□□□ -1.9
DEPDC4-210ENST00000551642 TRAV7A0A075B6U4 112 aa3.19□□□□□ -1.9
DEPDC4-210ENST00000551642 LOC101927531A0A1B0GV80 90 aa3.19□□□□□ -1.9
DEPDC4-210ENST00000551642 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
DEPDC4-210ENST00000551642 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
DEPDC4-210ENST00000551642 H3BPC8 53 aa3.18□□□□□ -1.9
DEPDC4-210ENST00000551642 MP68P56378 58 aa3.18□□□□□ -1.9
DEPDC4-210ENST00000551642 CYP4F30PQ9H0H9 118 aa3.18□□□□□ -1.9
DEPDC4-210ENST00000551642 RBM12B-AS1Q9P1G2 102 aa3.18□□□□□ -1.9
DEPDC4-210ENST00000551642 C1orf64Q8NEQ6 169 aa3.17□□□□□ -1.9
DEPDC4-210ENST00000551642 LINC00208Q96KT6 92 aa3.17□□□□□ -1.9
DEPDC4-210ENST00000551642 KRTAP10-10P60014 251 aa3.15□□□□□ -1.91
DEPDC4-210ENST00000551642 SERP2Q8N6R1 65 aa3.15□□□□□ -1.91
DEPDC4-210ENST00000551642 FAM236DA0A1B0GTK5 79 aa3.14□□□□□ -1.91
DEPDC4-210ENST00000551642 FAM236CP0DP71 79 aa3.14□□□□□ -1.91
DEPDC4-210ENST00000551642 C4orf26Q17RF5 130 aa3.14□□□□□ -1.91
DEPDC4-210ENST00000551642 KLKP1Q107X0 134 aa3.12□□□□□ -1.91
DEPDC4-210ENST00000551642 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
DEPDC4-210ENST00000551642 COX7CP15954 63 aa3.11□□□□□ -1.91
DEPDC4-210ENST00000551642 H1FX-AS1Q4G0G2 97 aa3.11□□□□□ -1.91
DEPDC4-210ENST00000551642 C20orf197Q8N268 126 aa3.09□□□□□ -1.91
DEPDC4-210ENST00000551642 ANAPC13Q9BS18 74 aa3.09□□□□□ -1.91
DEPDC4-210ENST00000551642 A8MUN3 132 aa3.08□□□□□ -1.92
DEPDC4-210ENST00000551642 SNURFQ9Y675 71 aa3.08□□□□□ -1.92
DEPDC4-210ENST00000551642 SPRR2EP22531 72 aa3.07□□□□□ -1.92
DEPDC4-210ENST00000551642 SPRR2BP35325 72 aa3.07□□□□□ -1.92
DEPDC4-210ENST00000551642 SPRR2AP35326 72 aa3.07□□□□□ -1.92
DEPDC4-210ENST00000551642 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
DEPDC4-210ENST00000551642 NDUFC1O43677 76 aa3.05□□□□□ -1.92
DEPDC4-210ENST00000551642 SPANXA2-OT1Q8N9U9 137 aa3.05□□□□□ -1.92
DEPDC4-210ENST00000551642 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
DEPDC4-210ENST00000551642 S4R3F8 94 aa3.04□□□□□ -1.92
DEPDC4-210ENST00000551642 LCA10Q71F78 164 aa3.03□□□□□ -1.92
DEPDC4-210ENST00000551642 H7BZZ5 65 aa3.02□□□□□ -1.93
DEPDC4-210ENST00000551642 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
DEPDC4-210ENST00000551642 CCDC179H3BU77 68 aa3.01□□□□□ -1.93
DEPDC4-210ENST00000551642 ACYP2P14621 99 aa3.01□□□□□ -1.93
DEPDC4-210ENST00000551642 CYSTM1Q9H1C7 97 aa3.01□□□□□ -1.93
DEPDC4-210ENST00000551642 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
DEPDC4-210ENST00000551642 V9GYY9 64 aa3□□□□□ -1.93
DEPDC4-210ENST00000551642 CSAG1Q6PB30 78 aa2.99□□□□□ -1.93
DEPDC4-210ENST00000551642 SPRR2DP22532 72 aa2.97□□□□□ -1.93
DEPDC4-210ENST00000551642 A6NN06 94 aa2.96□□□□□ -1.94
DEPDC4-210ENST00000551642 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
DEPDC4-210ENST00000551642 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms