RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 IGLV6-57P01721 117 aa3.16□□□□□ -1.9
TGFBR1-208ENST00000550253 KRTAP10-8P60410 259 aa3.16□□□□□ -1.9
TGFBR1-208ENST00000550253 ROMO1P60602 79 aa3.16□□□□□ -1.9
TGFBR1-208ENST00000550253 CNBPP62633 177 aaKnown RBP3.16□□□□□ -1.9
TGFBR1-208ENST00000550253 PLAC8Q9NZF1 115 aa3.16□□□□□ -1.9
TGFBR1-208ENST00000550253 IGLV10-54A0A075B6I4 117 aa3.15□□□□□ -1.9
TGFBR1-208ENST00000550253 IGHV3-64A0A075B6Q5 118 aa3.15□□□□□ -1.9
TGFBR1-208ENST00000550253 SMIM11BQ8TCY0 68 aa3.15□□□□□ -1.9
TGFBR1-208ENST00000550253 RPL39LQ96EH5 51 aaKnown RBP3.15□□□□□ -1.9
TGFBR1-208ENST00000550253 RPL39P62891 51 aaKnown RBP3.14□□□□□ -1.91
TGFBR1-208ENST00000550253 CLPSL2Q6UWE3 100 aa3.14□□□□□ -1.91
TGFBR1-208ENST00000550253 SPACA4Q8TDM5 124 aa3.14□□□□□ -1.91
TGFBR1-208ENST00000550253 COX7B2Q8TF08 81 aa3.14□□□□□ -1.91
TGFBR1-208ENST00000550253 ETDCA0A1B0GVM5 59 aa3.14□□□□□ -1.91
TGFBR1-208ENST00000550253 IGKV4-1P06312 121 aa3.14□□□□□ -1.91
TGFBR1-208ENST00000550253 LINC00304Q8N9R0 145 aa3.14□□□□□ -1.91
TGFBR1-208ENST00000550253 IGKV2-24A0A0C4DH68 120 aa3.13□□□□□ -1.91
TGFBR1-208ENST00000550253 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
TGFBR1-208ENST00000550253 ANGP03950 147 aaKnown RBP3.13□□□□□ -1.91
TGFBR1-208ENST00000550253 MGPP08493 103 aa3.13□□□□□ -1.91
TGFBR1-208ENST00000550253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.11□□□□□ -1.91
TGFBR1-208ENST00000550253 COX6A2Q02221 97 aa3.11□□□□□ -1.91
TGFBR1-208ENST00000550253 KCNQ1DNQ9H478 68 aa3.11□□□□□ -1.91
TGFBR1-208ENST00000550253 SPAG11BQ08648 103 aa3.1□□□□□ -1.91
TGFBR1-208ENST00000550253 KRTAP13-3Q3SY46 172 aa3.1□□□□□ -1.91
TGFBR1-208ENST00000550253 SPAG11AQ6PDA7 123 aa3.1□□□□□ -1.91
TGFBR1-208ENST00000550253 Q8NDZ9 215 aa3.1□□□□□ -1.91
TGFBR1-208ENST00000550253 PSORS1C2Q9UIG4 136 aa3.1□□□□□ -1.91
TGFBR1-208ENST00000550253 A0A096LNI7 61 aa3.09□□□□□ -1.91
TGFBR1-208ENST00000550253 P0C880 135 aa3.09□□□□□ -1.91
TGFBR1-208ENST00000550253 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
TGFBR1-208ENST00000550253 A0A087WSZ3 146 aa3.09□□□□□ -1.92
TGFBR1-208ENST00000550253 H0Y9P7 68 aa3.09□□□□□ -1.92
TGFBR1-208ENST00000550253 COX7BP24311 80 aa3.09□□□□□ -1.92
TGFBR1-208ENST00000550253 CSAG1Q6PB30 78 aa3.09□□□□□ -1.92
TGFBR1-208ENST00000550253 SPINK6Q6UWN8 80 aa3.09□□□□□ -1.92
TGFBR1-208ENST00000550253 MIR22HGQ0VDD5 57 aa3.08□□□□□ -1.92
TGFBR1-208ENST00000550253 M0QY20 66 aa3.07□□□□□ -1.92
TGFBR1-208ENST00000550253 COA5Q86WW8 74 aa3.07□□□□□ -1.92
TGFBR1-208ENST00000550253 SPINK7P58062 85 aa3.06□□□□□ -1.92
TGFBR1-208ENST00000550253 C20orf166-AS1Q96NR2 134 aa3.06□□□□□ -1.92
TGFBR1-208ENST00000550253 CDKN2A-AS1Q9UH64 79 aa3.06□□□□□ -1.92
TGFBR1-208ENST00000550253 SPATA8Q6RVD6 105 aa3.05□□□□□ -1.92
TGFBR1-208ENST00000550253 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.05□□□□□ -1.92
TGFBR1-208ENST00000550253 LINC00575Q6W349 94 aa3.05□□□□□ -1.92
TGFBR1-208ENST00000550253 MUC17Q685J3 4493 aa3.05□□□□□ -1.92
TGFBR1-208ENST00000550253 GVQW2A0A096LPI5 108 aaPredicted RBP3.04□□□□□ -1.92
TGFBR1-208ENST00000550253 IGKV3OR2-268A0A0C4DH90 116 aa3.04□□□□□ -1.92
TGFBR1-208ENST00000550253 LINC00158P58513 81 aa3.03□□□□□ -1.92
TGFBR1-208ENST00000550253 C1orf137Q5JT78 98 aa3.03□□□□□ -1.92
TGFBR1-208ENST00000550253 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
TGFBR1-208ENST00000550253 UQCR11O14957 56 aa3.02□□□□□ -1.93
TGFBR1-208ENST00000550253 SPRR4Q96PI1 79 aa3.01□□□□□ -1.93
TGFBR1-208ENST00000550253 LINC00959A0A1B0GUT2 108 aa3□□□□□ -1.93
TGFBR1-208ENST00000550253 Q6ZQY7 126 aa3□□□□□ -1.93
TGFBR1-208ENST00000550253 DMAC1Q96GE9 116 aa3□□□□□ -1.93
TGFBR1-208ENST00000550253 PRO2289Q9P1D8 64 aa2.99□□□□□ -1.93
TGFBR1-208ENST00000550253 COX17Q14061 63 aa2.98□□□□□ -1.93
TGFBR1-208ENST00000550253 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
TGFBR1-208ENST00000550253 CRCT1Q9UGL9 99 aa2.96□□□□□ -1.94
TGFBR1-208ENST00000550253 Q8IZM0 81 aa2.94□□□□□ -1.94
TGFBR1-208ENST00000550253 KRTAP10-10P60014 251 aa2.93□□□□□ -1.94
TGFBR1-208ENST00000550253 KRTAP4-1Q9BYQ7 146 aa2.93□□□□□ -1.94
TGFBR1-208ENST00000550253 IGLV5-48A0A075B6I7 105 aa2.93□□□□□ -1.94
TGFBR1-208ENST00000550253 A0A0G2JQZ4 141 aa2.93□□□□□ -1.94
TGFBR1-208ENST00000550253 C6orf48Q9UBA6 75 aa2.93□□□□□ -1.94
TGFBR1-208ENST00000550253 TPRXLQ17RH7 258 aa2.92□□□□□ -1.94
TGFBR1-208ENST00000550253 UNQ6190/PRO20217Q6UXQ8 127 aa2.92□□□□□ -1.94
TGFBR1-208ENST00000550253 A0A1B0GU69 56 aa2.9□□□□□ -1.95
TGFBR1-208ENST00000550253 TP53AIP1Q9HCN2 124 aa2.9□□□□□ -1.95
TGFBR1-208ENST00000550253 TOMM7Q9P0U1 55 aa2.9□□□□□ -1.95
TGFBR1-208ENST00000550253 K7EQZ3 153 aa2.89□□□□□ -1.95
TGFBR1-208ENST00000550253 LINC00472Q9H8W2 130 aa2.88□□□□□ -1.95
TGFBR1-208ENST00000550253 ACYP2P14621 99 aa2.87□□□□□ -1.95
TGFBR1-208ENST00000550253 KRTAP19-2Q3LHN2 52 aa2.87□□□□□ -1.95
TGFBR1-208ENST00000550253 KRTAP13-1Q8IUC0 172 aa2.87□□□□□ -1.95
TGFBR1-208ENST00000550253 MT1HP80294 61 aa2.83□□□□□ -1.96
TGFBR1-208ENST00000550253 WFDC13Q8IUB5 93 aa2.83□□□□□ -1.96
TGFBR1-208ENST00000550253 SSPOA2VEC9 5147 aa2.82□□□□□ -1.96
TGFBR1-208ENST00000550253 USH2AO75445 5202 aa2.82□□□□□ -1.96
TGFBR1-208ENST00000550253 PRLHP81277 87 aa2.81□□□□□ -1.96
TGFBR1-208ENST00000550253 FLGP20930 4061 aaPredicted RBP2.8□□□□□ -1.96
TGFBR1-208ENST00000550253 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
TGFBR1-208ENST00000550253 PCOTHQ58A44 107 aa2.8□□□□□ -1.96
TGFBR1-208ENST00000550253 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
TGFBR1-208ENST00000550253 Q96NJ1 140 aa2.78□□□□□ -1.97
TGFBR1-208ENST00000550253 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
TGFBR1-208ENST00000550253 MMP24-AS1A0A0U1RRL7 71 aa2.74□□□□□ -1.97
TGFBR1-208ENST00000550253 SSBP3-AS1Q7Z2R9 100 aa2.73□□□□□ -1.97
TGFBR1-208ENST00000550253 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
TGFBR1-208ENST00000550253 SPINK1P00995 79 aa2.72□□□□□ -1.97
TGFBR1-208ENST00000550253 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
TGFBR1-208ENST00000550253 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
TGFBR1-208ENST00000550253 DEFB105AQ8NG35 78 aa2.71□□□□□ -1.98
TGFBR1-208ENST00000550253 Q6ZRX8 168 aa2.7□□□□□ -1.98
TGFBR1-208ENST00000550253 C9orf92A6NGG3 77 aa2.69□□□□□ -1.98
TGFBR1-208ENST00000550253 SPRR1AP35321 89 aa2.69□□□□□ -1.98
TGFBR1-208ENST00000550253 RPS29P62273 56 aaKnown RBP2.69□□□□□ -1.98
TGFBR1-208ENST00000550253 M0R2T5 61 aa2.68□□□□□ -1.98
TGFBR1-208ENST00000550253 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms