RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RPS29P62273 56 aaKnown RBP3.04□□□□□ -1.92
CPSF7-220ENST00000541963 ST20-AS1Q8NBB2 130 aa3.04□□□□□ -1.92
CPSF7-220ENST00000541963 HCG22E2RYF7 251 aa3.03□□□□□ -1.92
CPSF7-220ENST00000541963 ASB16-AS1Q495Z4 193 aa3.03□□□□□ -1.92
CPSF7-220ENST00000541963 DEFB105AQ8NG35 78 aa3.03□□□□□ -1.92
CPSF7-220ENST00000541963 ZCCHC13Q8WW36 166 aaKnown RBP3.03□□□□□ -1.92
CPSF7-220ENST00000541963 RETNLBQ9BQ08 111 aa3.03□□□□□ -1.92
CPSF7-220ENST00000541963 LPAP08519 4548 aa3.03□□□□□ -1.92
CPSF7-220ENST00000541963 TRAV22A0A0B4J277 110 aa3.02□□□□□ -1.93
CPSF7-220ENST00000541963 TPRXLQ17RH7 258 aa3.02□□□□□ -1.93
CPSF7-220ENST00000541963 C1orf64Q8NEQ6 169 aa3.02□□□□□ -1.93
CPSF7-220ENST00000541963 IGLV5-48A0A075B6I7 105 aa3.01□□□□□ -1.93
CPSF7-220ENST00000541963 LOC101927531A0A1B0GV80 90 aa3□□□□□ -1.93
CPSF7-220ENST00000541963 DEFB116Q30KQ4 102 aa2.99□□□□□ -1.93
CPSF7-220ENST00000541963 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
CPSF7-220ENST00000541963 C7orf65Q6ZTY9 151 aa2.99□□□□□ -1.93
CPSF7-220ENST00000541963 LINC00208Q96KT6 92 aa2.99□□□□□ -1.93
CPSF7-220ENST00000541963 CDC42SE1Q9NRR8 79 aa2.98□□□□□ -1.93
CPSF7-220ENST00000541963 C8orf87E5RJ46 101 aa2.97□□□□□ -1.93
CPSF7-220ENST00000541963 CHKB-CPT1BH3BT56 60 aa2.97□□□□□ -1.93
CPSF7-220ENST00000541963 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
CPSF7-220ENST00000541963 LCA10Q71F78 164 aa2.97□□□□□ -1.93
CPSF7-220ENST00000541963 RNF213Q63HN8 5207 aa2.97□□□□□ -1.93
CPSF7-220ENST00000541963 KRTAP13-3Q3SY46 172 aa2.96□□□□□ -1.94
CPSF7-220ENST00000541963 Q5VV11 94 aa2.96□□□□□ -1.94
CPSF7-220ENST00000541963 RBM12B-AS1Q9P1G2 102 aa2.96□□□□□ -1.94
CPSF7-220ENST00000541963 A6NED7 52 aa2.95□□□□□ -1.94
CPSF7-220ENST00000541963 PSPHP1O15172 72 aa2.95□□□□□ -1.94
CPSF7-220ENST00000541963 TP53AIP1Q9HCN2 124 aa2.95□□□□□ -1.94
CPSF7-220ENST00000541963 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
CPSF7-220ENST00000541963 A8MUN3 132 aa2.94□□□□□ -1.94
CPSF7-220ENST00000541963 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
CPSF7-220ENST00000541963 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
CPSF7-220ENST00000541963 CASC2Q6XLA1 102 aa2.94□□□□□ -1.94
CPSF7-220ENST00000541963 A6NN06 94 aa2.93□□□□□ -1.94
CPSF7-220ENST00000541963 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
CPSF7-220ENST00000541963 LINC01558Q9Y6Z2 57 aa2.93□□□□□ -1.94
CPSF7-220ENST00000541963 A0A0G2JQZ4 141 aa2.92□□□□□ -1.94
CPSF7-220ENST00000541963 A0A1B0GVX0 72 aa2.92□□□□□ -1.94
CPSF7-220ENST00000541963 IGFL1Q6UW32 110 aa2.92□□□□□ -1.94
CPSF7-220ENST00000541963 C9orf92A6NGG3 77 aa2.91□□□□□ -1.94
CPSF7-220ENST00000541963 SPTSSBQ8NFR3 76 aa2.91□□□□□ -1.94
CPSF7-220ENST00000541963 H0Y9P7 68 aa2.9□□□□□ -1.95
CPSF7-220ENST00000541963 A0A1W2PNM2 257 aa2.89□□□□□ -1.95
CPSF7-220ENST00000541963 K7EQZ3 153 aa2.89□□□□□ -1.95
CPSF7-220ENST00000541963 COA5Q86WW8 74 aa2.89□□□□□ -1.95
CPSF7-220ENST00000541963 MUC2Q02817 5179 aa2.88□□□□□ -1.95
CPSF7-220ENST00000541963 A8MWP4 228 aa2.88□□□□□ -1.95
CPSF7-220ENST00000541963 PCOTHQ58A44 107 aa2.87□□□□□ -1.95
CPSF7-220ENST00000541963 A0A087WSZ3 146 aa2.86□□□□□ -1.95
CPSF7-220ENST00000541963 RPL37P61927 97 aaKnown RBP2.86□□□□□ -1.95
CPSF7-220ENST00000541963 FAT4Q6V0I7 4981 aa2.86□□□□□ -1.95
CPSF7-220ENST00000541963 LINC01554Q52M75 96 aa2.85□□□□□ -1.95
CPSF7-220ENST00000541963 IGHV6-1A0A0B4J1U7 121 aa2.84□□□□□ -1.95
CPSF7-220ENST00000541963 Q96NJ1 140 aa2.84□□□□□ -1.95
CPSF7-220ENST00000541963 WFDC13Q8IUB5 93 aa2.83□□□□□ -1.96
CPSF7-220ENST00000541963 KRTAP4-1Q9BYQ7 146 aa2.83□□□□□ -1.96
CPSF7-220ENST00000541963 ACYP2P14621 99 aa2.82□□□□□ -1.96
CPSF7-220ENST00000541963 LINC00313P59037 77 aa2.82□□□□□ -1.96
CPSF7-220ENST00000541963 Q5W150 140 aa2.81□□□□□ -1.96
CPSF7-220ENST00000541963 C20orf166-AS1Q96NR2 134 aa2.8□□□□□ -1.96
CPSF7-220ENST00000541963 LINC00472Q9H8W2 130 aa2.8□□□□□ -1.96
CPSF7-220ENST00000541963 MMP24-AS1A0A0U1RRL7 71 aa2.79□□□□□ -1.96
CPSF7-220ENST00000541963 A8MUU9 505 aa2.79□□□□□ -1.96
CPSF7-220ENST00000541963 UQCR11O14957 56 aa2.79□□□□□ -1.96
CPSF7-220ENST00000541963 SPATA8Q6RVD6 105 aa2.79□□□□□ -1.96
CPSF7-220ENST00000541963 COX6B2Q6YFQ2 88 aa2.79□□□□□ -1.96
CPSF7-220ENST00000541963 A0A1B0GU69 56 aa2.77□□□□□ -1.97
CPSF7-220ENST00000541963 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
CPSF7-220ENST00000541963 M0R2T5 61 aa2.76□□□□□ -1.97
CPSF7-220ENST00000541963 HRES1P13985 223 aa2.76□□□□□ -1.97
CPSF7-220ENST00000541963 MRPL34Q9BQ48 92 aaKnown RBP2.76□□□□□ -1.97
CPSF7-220ENST00000541963 C8orf17Q9NRJ1 99 aa2.76□□□□□ -1.97
CPSF7-220ENST00000541963 SPINK7P58062 85 aa2.75□□□□□ -1.97
CPSF7-220ENST00000541963 DMAC1Q96GE9 116 aa2.75□□□□□ -1.97
CPSF7-220ENST00000541963 MT1HP80294 61 aa2.74□□□□□ -1.97
CPSF7-220ENST00000541963 MIR22HGQ0VDD5 57 aa2.74□□□□□ -1.97
CPSF7-220ENST00000541963 KRTAP19-2Q3LHN2 52 aa2.74□□□□□ -1.97
CPSF7-220ENST00000541963 K7ERS5 55 aa2.68□□□□□ -1.98
CPSF7-220ENST00000541963 FLGP20930 4061 aaPredicted RBP2.65□□□□□ -1.98
CPSF7-220ENST00000541963 ROMO1P60602 79 aa2.65□□□□□ -1.99
CPSF7-220ENST00000541963 CSAG1Q6PB30 78 aa2.65□□□□□ -1.99
CPSF7-220ENST00000541963 KRTAP25-1Q3LHN0 102 aa2.64□□□□□ -1.99
CPSF7-220ENST00000541963 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
CPSF7-220ENST00000541963 SPINT4Q6UDR6 99 aa2.61□□□□□ -1.99
CPSF7-220ENST00000541963 ADM2Q7Z4H4 148 aa2.6□□□□□ -1.99
CPSF7-220ENST00000541963 CRCT1Q9UGL9 99 aa2.6□□□□□ -1.99
CPSF7-220ENST00000541963 FSIP2Q5CZC0 6907 aa2.6□□□□□ -1.99
CPSF7-220ENST00000541963 H1FX-AS1Q4G0G2 97 aa2.59□□□□□ -1.99
CPSF7-220ENST00000541963 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
CPSF7-220ENST00000541963 KRTAP10-10P60014 251 aa2.57□□□□□ -2
CPSF7-220ENST00000541963 MT2AP02795 61 aa2.56□□□□□ -2
CPSF7-220ENST00000541963 A0A1B0GU33 70 aa2.55□□□□□ -2
CPSF7-220ENST00000541963 LCE3AQ5TA76 89 aa2.55□□□□□ -2
CPSF7-220ENST00000541963 MT1FP04733 61 aa2.53□□□□□ -2
CPSF7-220ENST00000541963 S4R3F8 94 aa2.51□□□□□ -2.01
CPSF7-220ENST00000541963 H0YAA0 97 aa2.5□□□□□ -2.01
CPSF7-220ENST00000541963 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
CPSF7-220ENST00000541963 USH2AO75445 5202 aa2.47□□□□□ -2.01
CPSF7-220ENST00000541963 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms