RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 TMEM258P61165 79 aa4.23□□□□□ -1.73
SMAD3-203ENST00000537194 C5orf47Q569G3 176 aa4.23□□□□□ -1.73
SMAD3-203ENST00000537194 TP53AIP1Q9HCN2 124 aa4.23□□□□□ -1.73
SMAD3-203ENST00000537194 C20orf197Q8N268 126 aa4.22□□□□□ -1.73
SMAD3-203ENST00000537194 MRPL34Q9BQ48 92 aaKnown RBP4.21□□□□□ -1.74
SMAD3-203ENST00000537194 ATP5EP56381 51 aaPredicted RBP4.2□□□□□ -1.74
SMAD3-203ENST00000537194 H7BZZ5 65 aa4.19□□□□□ -1.74
SMAD3-203ENST00000537194 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
SMAD3-203ENST00000537194 TRAV22A0A0B4J277 110 aa4.18□□□□□ -1.74
SMAD3-203ENST00000537194 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
SMAD3-203ENST00000537194 MP68P56378 58 aa4.18□□□□□ -1.74
SMAD3-203ENST00000537194 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
SMAD3-203ENST00000537194 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
SMAD3-203ENST00000537194 H0Y9P7 68 aa4.15□□□□□ -1.75
SMAD3-203ENST00000537194 SNURFQ9Y675 71 aa4.15□□□□□ -1.75
SMAD3-203ENST00000537194 A6NN06 94 aa4.14□□□□□ -1.75
SMAD3-203ENST00000537194 RPS28P62857 69 aaKnown RBP4.12□□□□□ -1.75
SMAD3-203ENST00000537194 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
SMAD3-203ENST00000537194 LOC101927531A0A1B0GV80 90 aa4.11□□□□□ -1.75
SMAD3-203ENST00000537194 Q5VV11 94 aa4.11□□□□□ -1.75
SMAD3-203ENST00000537194 LINC00208Q96KT6 92 aa4.11□□□□□ -1.75
SMAD3-203ENST00000537194 C1orf64Q8NEQ6 169 aa4.1□□□□□ -1.75
SMAD3-203ENST00000537194 C4orf26Q17RF5 130 aa4.09□□□□□ -1.75
SMAD3-203ENST00000537194 CSAG1Q6PB30 78 aa4.09□□□□□ -1.75
SMAD3-203ENST00000537194 CYP4F30PQ9H0H9 118 aa4.09□□□□□ -1.75
SMAD3-203ENST00000537194 NEBP20929 6669 aa4.07□□□□□ -1.76
SMAD3-203ENST00000537194 Q5W150 140 aa4.07□□□□□ -1.76
SMAD3-203ENST00000537194 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
SMAD3-203ENST00000537194 S4R3F8 94 aa4.07□□□□□ -1.76
SMAD3-203ENST00000537194 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
SMAD3-203ENST00000537194 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
SMAD3-203ENST00000537194 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
SMAD3-203ENST00000537194 MT1BP07438 61 aa4□□□□□ -1.77
SMAD3-203ENST00000537194 KRTAP10-5P60370 271 aa4□□□□□ -1.77
SMAD3-203ENST00000537194 KRTAP19-8Q3LI54 63 aa4□□□□□ -1.77
SMAD3-203ENST00000537194 LCA10Q71F78 164 aa3.98□□□□□ -1.77
SMAD3-203ENST00000537194 SMIM26A0A096LP01 95 aa3.97□□□□□ -1.77
SMAD3-203ENST00000537194 DMAC1Q96GE9 116 aa3.97□□□□□ -1.77
SMAD3-203ENST00000537194 CRIPTQ9P021 101 aa3.97□□□□□ -1.77
SMAD3-203ENST00000537194 A8MUN3 132 aa3.95□□□□□ -1.78
SMAD3-203ENST00000537194 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
SMAD3-203ENST00000537194 SVIPQ8NHG7 77 aa3.94□□□□□ -1.78
SMAD3-203ENST00000537194 KRTAP3-1Q9BYR8 98 aa3.94□□□□□ -1.78
SMAD3-203ENST00000537194 ACYP2P14621 99 aa3.92□□□□□ -1.78
SMAD3-203ENST00000537194 COA5Q86WW8 74 aa3.92□□□□□ -1.78
SMAD3-203ENST00000537194 V9GYY9 64 aa3.91□□□□□ -1.78
SMAD3-203ENST00000537194 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.79
SMAD3-203ENST00000537194 Q1T7F1 81 aa3.9□□□□□ -1.79
SMAD3-203ENST00000537194 KRTAP2-4Q9BYR9 128 aa3.9□□□□□ -1.79
SMAD3-203ENST00000537194 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
SMAD3-203ENST00000537194 KMT2DO14686 5537 aa3.89□□□□□ -1.79
SMAD3-203ENST00000537194 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
SMAD3-203ENST00000537194 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
SMAD3-203ENST00000537194 SPRR2EP22531 72 aa3.84□□□□□ -1.79
SMAD3-203ENST00000537194 SPRR2BP35325 72 aa3.84□□□□□ -1.79
SMAD3-203ENST00000537194 SPRR2AP35326 72 aa3.84□□□□□ -1.79
SMAD3-203ENST00000537194 PLAC4Q8WY50 150 aa3.84□□□□□ -1.79
SMAD3-203ENST00000537194 H0YAA0 97 aa3.82□□□□□ -1.8
SMAD3-203ENST00000537194 CHKB-CPT1BH3BT56 60 aa3.82□□□□□ -1.8
SMAD3-203ENST00000537194 LINC01558Q9Y6Z2 57 aa3.82□□□□□ -1.8
SMAD3-203ENST00000537194 SPTSSBQ8NFR3 76 aa3.81□□□□□ -1.8
SMAD3-203ENST00000537194 ADM2Q7Z4H4 148 aa3.79□□□□□ -1.8
SMAD3-203ENST00000537194 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
SMAD3-203ENST00000537194 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
SMAD3-203ENST00000537194 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
SMAD3-203ENST00000537194 R4GN34 69 aa3.76□□□□□ -1.81
SMAD3-203ENST00000537194 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
SMAD3-203ENST00000537194 PSPHP1O15172 72 aa3.72□□□□□ -1.81
SMAD3-203ENST00000537194 SPRR2DP22532 72 aa3.72□□□□□ -1.81
SMAD3-203ENST00000537194 MT1XP80297 61 aa3.72□□□□□ -1.81
SMAD3-203ENST00000537194 KRTAP12-2P59991 146 aa3.71□□□□□ -1.82
SMAD3-203ENST00000537194 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
SMAD3-203ENST00000537194 A0A1B0GU69 56 aa3.7□□□□□ -1.82
SMAD3-203ENST00000537194 M0QZ58 72 aa3.69□□□□□ -1.82
SMAD3-203ENST00000537194 SEC61GP60059 68 aa3.68□□□□□ -1.82
SMAD3-203ENST00000537194 LINC01554Q52M75 96 aa3.67□□□□□ -1.82
SMAD3-203ENST00000537194 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
SMAD3-203ENST00000537194 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.82
SMAD3-203ENST00000537194 A6NED7 52 aa3.65□□□□□ -1.83
SMAD3-203ENST00000537194 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
SMAD3-203ENST00000537194 UQCR11O14957 56 aa3.64□□□□□ -1.83
SMAD3-203ENST00000537194 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
SMAD3-203ENST00000537194 P0C880 135 aa3.62□□□□□ -1.83
SMAD3-203ENST00000537194 LCE3BQ5TA77 95 aa3.62□□□□□ -1.83
SMAD3-203ENST00000537194 KRTAP4-8A0A0G2JLE6 195 aa3.6□□□□□ -1.83
SMAD3-203ENST00000537194 H3BS24 57 aa3.6□□□□□ -1.83
SMAD3-203ENST00000537194 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
SMAD3-203ENST00000537194 KRTAP4-8Q9BYQ9 185 aa3.6□□□□□ -1.83
SMAD3-203ENST00000537194 A0A1B0GU33 70 aa3.57□□□□□ -1.84
SMAD3-203ENST00000537194 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
SMAD3-203ENST00000537194 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
SMAD3-203ENST00000537194 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
SMAD3-203ENST00000537194 A8MU10 97 aa3.51□□□□□ -1.85
SMAD3-203ENST00000537194 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
SMAD3-203ENST00000537194 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
SMAD3-203ENST00000537194 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
SMAD3-203ENST00000537194 K7ERS5 55 aa3.43□□□□□ -1.86
SMAD3-203ENST00000537194 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
SMAD3-203ENST00000537194 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
SMAD3-203ENST00000537194 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms