RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 A0A1B0GUL6 1792 aa-0.42□□□□□ -2.48
PRKDC-205ENST00000535375 PKIAP61925 76 aa-0.42□□□□□ -2.48
PRKDC-205ENST00000535375 PRLHP81277 87 aa-0.42□□□□□ -2.48
PRKDC-205ENST00000535375 ZNF720Q7Z2F6 126 aa-0.42□□□□□ -2.48
PRKDC-205ENST00000535375 S4R3F8 94 aa-0.42□□□□□ -2.48
PRKDC-205ENST00000535375 CFAP74Q9C0B2 1584 aa-0.42□□□□□ -2.48
PRKDC-205ENST00000535375 A0A1B0GUT8 65 aa-0.43□□□□□ -2.48
PRKDC-205ENST00000535375 H0YAA0 97 aa-0.43□□□□□ -2.48
PRKDC-205ENST00000535375 HMGN2P05204 90 aaKnown RBP-0.43□□□□□ -2.48
PRKDC-205ENST00000535375 C3orf79P0CE67 100 aa-0.43□□□□□ -2.48
PRKDC-205ENST00000535375 LINC00158P58513 81 aa-0.43□□□□□ -2.48
PRKDC-205ENST00000535375 RPL38P63173 70 aaKnown RBP-0.43□□□□□ -2.48
PRKDC-205ENST00000535375 DEFA5Q01523 94 aa-0.43□□□□□ -2.48
PRKDC-205ENST00000535375 MT1MQ8N339 61 aa-0.43□□□□□ -2.48
PRKDC-205ENST00000535375 DEFB104AQ8WTQ1 72 aa-0.43□□□□□ -2.48
PRKDC-205ENST00000535375 GAFA1Q96PS6 74 aa-0.43□□□□□ -2.48
PRKDC-205ENST00000535375 AKAP12Q02952 1782 aa-0.43□□□□□ -2.48
PRKDC-205ENST00000535375 ARFGEF2Q9Y6D5 1785 aa-0.44□□□□□ -2.48
PRKDC-205ENST00000535375 CEP162Q5TB80 1403 aa-0.44□□□□□ -2.48
PRKDC-205ENST00000535375 TRAV21A0A0B4J279 112 aa-0.44□□□□□ -2.48
PRKDC-205ENST00000535375 IQCF6A8MYZ5 107 aa-0.44□□□□□ -2.48
PRKDC-205ENST00000535375 PLGLAQ15195 96 aa-0.44□□□□□ -2.48
PRKDC-205ENST00000535375 DEFB110Q30KQ9 67 aa-0.44□□□□□ -2.48
PRKDC-205ENST00000535375 ANKRD36CQ5JPF3 1778 aa-0.45□□□□□ -2.48
PRKDC-205ENST00000535375 K7EP34 96 aa-0.45□□□□□ -2.48
PRKDC-205ENST00000535375 DEFB130BP0DP73 79 aa-0.45□□□□□ -2.48
PRKDC-205ENST00000535375 DEFB130AP0DP74 79 aa-0.45□□□□□ -2.48
PRKDC-205ENST00000535375 DEFB1P60022 68 aa-0.45□□□□□ -2.48
PRKDC-205ENST00000535375 MT1XP80297 61 aa-0.45□□□□□ -2.48
PRKDC-205ENST00000535375 C20orf78Q9BR46 151 aa-0.45□□□□□ -2.48
PRKDC-205ENST00000535375 NCOA2Q15596 1464 aa-0.46□□□□□ -2.48
PRKDC-205ENST00000535375 MYMXA0A1B0GTQ4 84 aa-0.46□□□□□ -2.48
PRKDC-205ENST00000535375 CYB5AP00167 134 aa-0.46□□□□□ -2.48
PRKDC-205ENST00000535375 IFI6P09912 130 aa-0.46□□□□□ -2.48
PRKDC-205ENST00000535375 SMIM11AP58511 58 aa-0.46□□□□□ -2.48
PRKDC-205ENST00000535375 PEA15Q15121 130 aa-0.46□□□□□ -2.48
PRKDC-205ENST00000535375 WFDC9Q8NEX5 89 aa-0.46□□□□□ -2.48
PRKDC-205ENST00000535375 CCNB3Q8WWL7 1395 aa-0.46□□□□□ -2.48
PRKDC-205ENST00000535375 PLIN4Q96Q06 1357 aa-0.46□□□□□ -2.48
PRKDC-205ENST00000535375 PPLO60437 1756 aa-0.47□□□□□ -2.48
PRKDC-205ENST00000535375 CDC42BPGQ6DT37 1551 aa-0.47□□□□□ -2.48
PRKDC-205ENST00000535375 GYPAP02724 150 aa-0.47□□□□□ -2.48
PRKDC-205ENST00000535375 IAPPP10997 89 aa-0.47□□□□□ -2.48
PRKDC-205ENST00000535375 DEFB106AQ8N104 65 aa-0.47□□□□□ -2.48
PRKDC-205ENST00000535375 RABAC1Q9UI14 185 aa-0.47□□□□□ -2.48
PRKDC-205ENST00000535375 FANCD2Q9BXW9 1451 aa-0.48□□□□□ -2.49
PRKDC-205ENST00000535375 CEBPZOSA8MTT3 80 aa-0.48□□□□□ -2.49
PRKDC-205ENST00000535375 NDUFB1O75438 58 aa-0.48□□□□□ -2.49
PRKDC-205ENST00000535375 MT1EP04732 61 aa-0.48□□□□□ -2.49
PRKDC-205ENST00000535375 IQGAP2Q13576 1575 aa-0.49□□□□□ -2.49
PRKDC-205ENST00000535375 DEFB131BA0A096LNP1 70 aa-0.49□□□□□ -2.49
PRKDC-205ENST00000535375 UMAD1C9J7I0 102 aa-0.49□□□□□ -2.49
PRKDC-205ENST00000535375 NDUFA4O00483 81 aa-0.49□□□□□ -2.49
PRKDC-205ENST00000535375 ACYP1P07311 99 aa-0.49□□□□□ -2.49
PRKDC-205ENST00000535375 SNRPFP62306 86 aaKnown RBP-0.49□□□□□ -2.49
PRKDC-205ENST00000535375 LINC00643Q86TS7 51 aa-0.49□□□□□ -2.49
PRKDC-205ENST00000535375 IGLV5-48A0A075B6I7 105 aa-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 MMP24-AS1A0A0U1RRL7 71 aa-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 TNP1P09430 55 aa-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 IFI27P40305 119 aaPredicted RBP-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 RPS27P42677 84 aaKnown RBP-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 WT1-ASQ06250 92 aa-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 NREPQ16612 68 aa-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 PYY3Q5JQD4 70 aa-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 CLPSL2Q6UWE3 100 aa-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 RPS27LQ71UM5 84 aaKnown RBP-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 MT1LQ93083 61 aa-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 ABCA10Q8WWZ4 1543 aa-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 SYCP2Q9BX26 1530 aa-0.5□□□□□ -2.49
PRKDC-205ENST00000535375 HMGA1P17096 107 aaKnown RBP-0.51□□□□□ -2.49
PRKDC-205ENST00000535375 DEFB121Q5J5C9 76 aa-0.51□□□□□ -2.49
PRKDC-205ENST00000535375 S100A16Q96FQ6 103 aaKnown RBP-0.51□□□□□ -2.49
PRKDC-205ENST00000535375 KCNQ1DNQ9H478 68 aa-0.51□□□□□ -2.49
PRKDC-205ENST00000535375 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.51□□□□□ -2.49
PRKDC-205ENST00000535375 CD163L1Q9NR16 1453 aa-0.52□□□□□ -2.49
PRKDC-205ENST00000535375 RRBP1Q9P2E9 1410 aaKnown RBP-0.52□□□□□ -2.49
PRKDC-205ENST00000535375 PVALEFA0A1B0GWK0 134 aa-0.52□□□□□ -2.49
PRKDC-205ENST00000535375 CRIP1P50238 77 aa-0.52□□□□□ -2.49
PRKDC-205ENST00000535375 ATP5EP2Q5VTU8 51 aa-0.52□□□□□ -2.49
PRKDC-205ENST00000535375 TOP2AP11388 1531 aaKnown RBP-0.53□□□□□ -2.49
PRKDC-205ENST00000535375 MRPL33O75394 65 aaKnown RBP-0.53□□□□□ -2.49
PRKDC-205ENST00000535375 MT1GP13640 62 aa-0.53□□□□□ -2.49
PRKDC-205ENST00000535375 TDRG1Q3Y452 100 aa-0.53□□□□□ -2.49
PRKDC-205ENST00000535375 V9GYS6 101 aa-0.53□□□□□ -2.49
PRKDC-205ENST00000535375 UACAQ9BZF9 1416 aa-0.54□□□□□ -2.5
PRKDC-205ENST00000535375 KANTRA0A1W2PQU2 76 aa-0.54□□□□□ -2.5
PRKDC-205ENST00000535375 SMIM13P0DJ93 91 aa-0.54□□□□□ -2.5
PRKDC-205ENST00000535375 BVES-AS1Q5T3Y7 98 aa-0.54□□□□□ -2.5
PRKDC-205ENST00000535375 NCBP2-AS2Q69YL0 99 aa-0.54□□□□□ -2.5
PRKDC-205ENST00000535375 UBL5Q9BZL1 73 aa-0.54□□□□□ -2.5
PRKDC-205ENST00000535375 ETDCA0A1B0GVM5 59 aa-0.55□□□□□ -2.5
PRKDC-205ENST00000535375 H3BUA1 57 aa-0.55□□□□□ -2.5
PRKDC-205ENST00000535375 MINOS1Q5TGZ0 78 aa-0.55□□□□□ -2.5
PRKDC-205ENST00000535375 Q9H521 79 aa-0.55□□□□□ -2.5
PRKDC-205ENST00000535375 NOP10Q9NPE3 64 aaKnown RBP-0.55□□□□□ -2.5
PRKDC-205ENST00000535375 A0A087WXM4 84 aa-0.56□□□□□ -2.5
PRKDC-205ENST00000535375 ENHOQ6UWT2 76 aa-0.56□□□□□ -2.5
PRKDC-205ENST00000535375 ST20Q9HBF5 79 aa-0.56□□□□□ -2.5
PRKDC-205ENST00000535375 C6orf48Q9UBA6 75 aa-0.56□□□□□ -2.5
PRKDC-205ENST00000535375 H3BUT2 72 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms