RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 KLKP1Q107X0 134 aa4.91□□□□□ -1.62
CSDE1-217ENST00000534699 NDUFC1O43677 76 aa4.9□□□□□ -1.63
CSDE1-217ENST00000534699 SERP1Q9Y6X1 66 aa4.9□□□□□ -1.63
CSDE1-217ENST00000534699 C20orf197Q8N268 126 aa4.9□□□□□ -1.63
CSDE1-217ENST00000534699 ATP5EP56381 51 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-217ENST00000534699 H7BZZ5 65 aa4.88□□□□□ -1.63
CSDE1-217ENST00000534699 SEC61GP60059 68 aa4.86□□□□□ -1.63
CSDE1-217ENST00000534699 Q8N9L7 120 aa4.85□□□□□ -1.63
CSDE1-217ENST00000534699 CSAG1Q6PB30 78 aa4.84□□□□□ -1.63
CSDE1-217ENST00000534699 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
CSDE1-217ENST00000534699 S4R3F8 94 aa4.83□□□□□ -1.64
CSDE1-217ENST00000534699 SMIM26A0A096LP01 95 aa4.83□□□□□ -1.64
CSDE1-217ENST00000534699 C1orf64Q8NEQ6 169 aa4.82□□□□□ -1.64
CSDE1-217ENST00000534699 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
CSDE1-217ENST00000534699 USH2AO75445 5202 aa4.81□□□□□ -1.64
CSDE1-217ENST00000534699 CRIPTQ9P021 101 aa4.8□□□□□ -1.64
CSDE1-217ENST00000534699 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
CSDE1-217ENST00000534699 SNURFQ9Y675 71 aa4.79□□□□□ -1.64
CSDE1-217ENST00000534699 V9GYY9 64 aa4.79□□□□□ -1.64
CSDE1-217ENST00000534699 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.64
CSDE1-217ENST00000534699 OCR1Q9BZK8 76 aa4.78□□□□□ -1.64
CSDE1-217ENST00000534699 CYP4F30PQ9H0H9 118 aa4.77□□□□□ -1.65
CSDE1-217ENST00000534699 TRAV22A0A0B4J277 110 aa4.76□□□□□ -1.65
CSDE1-217ENST00000534699 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
CSDE1-217ENST00000534699 SPRR2GQ9BYE4 73 aa4.76□□□□□ -1.65
CSDE1-217ENST00000534699 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
CSDE1-217ENST00000534699 A8MUN3 132 aa4.74□□□□□ -1.65
CSDE1-217ENST00000534699 KRTAP6-3Q3LI67 103 aa4.74□□□□□ -1.65
CSDE1-217ENST00000534699 H0YAA0 97 aa4.73□□□□□ -1.65
CSDE1-217ENST00000534699 Q5VV11 94 aa4.73□□□□□ -1.65
CSDE1-217ENST00000534699 LCA10Q71F78 164 aa4.73□□□□□ -1.65
CSDE1-217ENST00000534699 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
CSDE1-217ENST00000534699 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-217ENST00000534699 H3BPC8 53 aa4.66□□□□□ -1.66
CSDE1-217ENST00000534699 MT1BP07438 61 aa4.66□□□□□ -1.66
CSDE1-217ENST00000534699 H0Y9P7 68 aa4.65□□□□□ -1.66
CSDE1-217ENST00000534699 Q1T7F1 81 aa4.65□□□□□ -1.67
CSDE1-217ENST00000534699 A6NN06 94 aa4.64□□□□□ -1.67
CSDE1-217ENST00000534699 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
CSDE1-217ENST00000534699 H3BS24 57 aa4.62□□□□□ -1.67
CSDE1-217ENST00000534699 MP68P56378 58 aa4.61□□□□□ -1.67
CSDE1-217ENST00000534699 PMAIP1Q13794 54 aa4.6□□□□□ -1.67
CSDE1-217ENST00000534699 SPANXA2-OT1Q8N9U9 137 aa4.59□□□□□ -1.68
CSDE1-217ENST00000534699 LINC00208Q96KT6 92 aa4.55□□□□□ -1.68
CSDE1-217ENST00000534699 PRO2289Q9P1D8 64 aa4.52□□□□□ -1.69
CSDE1-217ENST00000534699 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
CSDE1-217ENST00000534699 DMAC1Q96GE9 116 aa4.49□□□□□ -1.69
CSDE1-217ENST00000534699 PSPHP1O15172 72 aa4.49□□□□□ -1.69
CSDE1-217ENST00000534699 ADM2Q7Z4H4 148 aa4.48□□□□□ -1.69
CSDE1-217ENST00000534699 MACF1Q9UPN3 7388 aaKnown RBP4.48□□□□□ -1.69
CSDE1-217ENST00000534699 A8MU10 97 aa4.46□□□□□ -1.7
CSDE1-217ENST00000534699 SPTSSBQ8NFR3 76 aa4.45□□□□□ -1.7
CSDE1-217ENST00000534699 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
CSDE1-217ENST00000534699 COA5Q86WW8 74 aa4.43□□□□□ -1.7
CSDE1-217ENST00000534699 CHKB-CPT1BH3BT56 60 aa4.42□□□□□ -1.7
CSDE1-217ENST00000534699 PRR15LQ9BU68 103 aa4.42□□□□□ -1.7
CSDE1-217ENST00000534699 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
CSDE1-217ENST00000534699 R4GN34 69 aa4.41□□□□□ -1.7
CSDE1-217ENST00000534699 ACYP2P14621 99 aa4.41□□□□□ -1.7
CSDE1-217ENST00000534699 LINC01558Q9Y6Z2 57 aa4.4□□□□□ -1.71
CSDE1-217ENST00000534699 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
CSDE1-217ENST00000534699 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
CSDE1-217ENST00000534699 A6NED7 52 aa4.36□□□□□ -1.71
CSDE1-217ENST00000534699 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
CSDE1-217ENST00000534699 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
CSDE1-217ENST00000534699 MT1XP80297 61 aa4.35□□□□□ -1.71
CSDE1-217ENST00000534699 M0QZ58 72 aa4.34□□□□□ -1.71
CSDE1-217ENST00000534699 P0C880 135 aa4.32□□□□□ -1.72
CSDE1-217ENST00000534699 NEBP20929 6669 aa4.31□□□□□ -1.72
CSDE1-217ENST00000534699 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
CSDE1-217ENST00000534699 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
CSDE1-217ENST00000534699 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
CSDE1-217ENST00000534699 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
CSDE1-217ENST00000534699 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
CSDE1-217ENST00000534699 SPRR2EP22531 72 aa4.21□□□□□ -1.74
CSDE1-217ENST00000534699 SPRR2BP35325 72 aa4.21□□□□□ -1.74
CSDE1-217ENST00000534699 SPRR2AP35326 72 aa4.21□□□□□ -1.74
CSDE1-217ENST00000534699 KRTAP10-12P60413 245 aa4.21□□□□□ -1.74
CSDE1-217ENST00000534699 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
CSDE1-217ENST00000534699 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
CSDE1-217ENST00000534699 A0A1B0GU69 56 aa4.19□□□□□ -1.74
CSDE1-217ENST00000534699 SPATA8Q6RVD6 105 aa4.18□□□□□ -1.74
CSDE1-217ENST00000534699 LINC01554Q52M75 96 aa4.17□□□□□ -1.74
CSDE1-217ENST00000534699 UQCR11O14957 56 aa4.15□□□□□ -1.75
CSDE1-217ENST00000534699 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
CSDE1-217ENST00000534699 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
CSDE1-217ENST00000534699 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
CSDE1-217ENST00000534699 SPRR2DP22532 72 aa4.08□□□□□ -1.76
CSDE1-217ENST00000534699 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-217ENST00000534699 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
CSDE1-217ENST00000534699 KRTAP4-8A0A0G2JLE6 195 aa4.05□□□□□ -1.76
CSDE1-217ENST00000534699 KRTAP4-8Q9BYQ9 185 aa4.05□□□□□ -1.76
CSDE1-217ENST00000534699 KMT2DO14686 5537 aa4.05□□□□□ -1.76
CSDE1-217ENST00000534699 CAMK2N1Q7Z7J9 78 aa4.04□□□□□ -1.76
CSDE1-217ENST00000534699 KRTAP13-4Q3LI77 160 aa4□□□□□ -1.77
CSDE1-217ENST00000534699 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
CSDE1-217ENST00000534699 A0A1B0GU33 70 aa3.98□□□□□ -1.77
CSDE1-217ENST00000534699 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
CSDE1-217ENST00000534699 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.78
CSDE1-217ENST00000534699 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms