RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZNF73O43830 326 aaPredicted RBP1.54□□□□□ -2.16
CHMP4A-208ENST00000534106 SEC61GP60059 68 aa1.54□□□□□ -2.16
CHMP4A-208ENST00000534106 KRTAP19-6Q3LI70 58 aa1.54□□□□□ -2.16
CHMP4A-208ENST00000534106 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.54□□□□□ -2.16
CHMP4A-208ENST00000534106 OBSCN-AS1Q96MR7 158 aa1.54□□□□□ -2.16
CHMP4A-208ENST00000534106 TRBV7-6A0A0J9YX20 115 aa1.53□□□□□ -2.16
CHMP4A-208ENST00000534106 H3BQ85 93 aa1.53□□□□□ -2.16
CHMP4A-208ENST00000534106 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
CHMP4A-208ENST00000534106 PDE6GP18545 87 aa1.53□□□□□ -2.16
CHMP4A-208ENST00000534106 ATP5EP56381 51 aaPredicted RBP1.53□□□□□ -2.16
CHMP4A-208ENST00000534106 KRTAP10-10P60014 251 aa1.53□□□□□ -2.16
CHMP4A-208ENST00000534106 SPRR4Q96PI1 79 aa1.53□□□□□ -2.16
CHMP4A-208ENST00000534106 SMIM26A0A096LP01 95 aa1.52□□□□□ -2.17
CHMP4A-208ENST00000534106 SPINK1P00995 79 aa1.52□□□□□ -2.17
CHMP4A-208ENST00000534106 IGLV6-57P01721 117 aa1.52□□□□□ -2.17
CHMP4A-208ENST00000534106 IGKV4-1P06312 121 aa1.52□□□□□ -2.17
CHMP4A-208ENST00000534106 ELOF1P60002 83 aaKnown RBP1.52□□□□□ -2.17
CHMP4A-208ENST00000534106 Q5XG85 94 aa1.52□□□□□ -2.17
CHMP4A-208ENST00000534106 WFDC13Q8IUB5 93 aa1.52□□□□□ -2.17
CHMP4A-208ENST00000534106 TMEM254Q8TBM7 123 aa1.52□□□□□ -2.17
CHMP4A-208ENST00000534106 HIGD2AQ9BW72 106 aa1.52□□□□□ -2.17
CHMP4A-208ENST00000534106 H7BZZ5 65 aa1.51□□□□□ -2.17
CHMP4A-208ENST00000534106 NDUFC1O43677 76 aa1.51□□□□□ -2.17
CHMP4A-208ENST00000534106 RPS28P62857 69 aaKnown RBP1.51□□□□□ -2.17
CHMP4A-208ENST00000534106 MOBPQ13875 183 aa1.51□□□□□ -2.17
CHMP4A-208ENST00000534106 DEFB116Q30KQ4 102 aa1.51□□□□□ -2.17
CHMP4A-208ENST00000534106 ST20-AS1Q8NBB2 130 aa1.51□□□□□ -2.17
CHMP4A-208ENST00000534106 A0A0G2JQZ4 141 aa1.5□□□□□ -2.17
CHMP4A-208ENST00000534106 TRBV7-4A0A0J9YYF1 115 aa1.5□□□□□ -2.17
CHMP4A-208ENST00000534106 ERC2-IT1O76042 136 aa1.5□□□□□ -2.17
CHMP4A-208ENST00000534106 C1orf195Q5TG92 126 aa1.5□□□□□ -2.17
CHMP4A-208ENST00000534106 HCG22E2RYF7 251 aa1.49□□□□□ -2.17
CHMP4A-208ENST00000534106 H0Y9P7 68 aa1.49□□□□□ -2.17
CHMP4A-208ENST00000534106 K7EQZ3 153 aa1.49□□□□□ -2.17
CHMP4A-208ENST00000534106 PSPHP1O15172 72 aa1.49□□□□□ -2.17
CHMP4A-208ENST00000534106 NDUFS5O43920 106 aa1.49□□□□□ -2.17
CHMP4A-208ENST00000534106 KRTAP2-3P0C7H8 128 aa1.49□□□□□ -2.17
CHMP4A-208ENST00000534106 MP68P56378 58 aa1.49□□□□□ -2.17
CHMP4A-208ENST00000534106 KLKP1Q107X0 134 aa1.49□□□□□ -2.17
CHMP4A-208ENST00000534106 KRTAP2-4Q9BYR9 128 aa1.49□□□□□ -2.17
CHMP4A-208ENST00000534106 PRO0628Q9UI54 55 aa1.49□□□□□ -2.17
CHMP4A-208ENST00000534106 A0A087WSZ3 146 aa1.48□□□□□ -2.17
CHMP4A-208ENST00000534106 A0A1W2PNM2 257 aa1.48□□□□□ -2.17
CHMP4A-208ENST00000534106 RPL37P61927 97 aaKnown RBP1.48□□□□□ -2.17
CHMP4A-208ENST00000534106 PP632Q6XCG6 107 aa1.48□□□□□ -2.17
CHMP4A-208ENST00000534106 Q6ZRX8 168 aa1.48□□□□□ -2.17
CHMP4A-208ENST00000534106 SSBP3-AS1Q7Z2R9 100 aa1.48□□□□□ -2.17
CHMP4A-208ENST00000534106 CAMK2N1Q7Z7J9 78 aa1.48□□□□□ -2.17
CHMP4A-208ENST00000534106 SPTSSBQ8NFR3 76 aa1.48□□□□□ -2.17
CHMP4A-208ENST00000534106 Q9BRP9 147 aa1.48□□□□□ -2.17
CHMP4A-208ENST00000534106 PRR15LQ9BU68 103 aa1.48□□□□□ -2.17
CHMP4A-208ENST00000534106 CHKB-CPT1BH3BT56 60 aa1.47□□□□□ -2.17
CHMP4A-208ENST00000534106 LINC00483Q53H64 154 aa1.47□□□□□ -2.17
CHMP4A-208ENST00000534106 IGFL1Q6UW32 110 aa1.47□□□□□ -2.17
CHMP4A-208ENST00000534106 CASC2Q6XLA1 102 aa1.47□□□□□ -2.17
CHMP4A-208ENST00000534106 LINC00208Q96KT6 92 aa1.47□□□□□ -2.17
CHMP4A-208ENST00000534106 KCNQ1DNQ9H478 68 aa1.47□□□□□ -2.17
CHMP4A-208ENST00000534106 V9GYY9 64 aa1.47□□□□□ -2.17
CHMP4A-208ENST00000534106 hDV103S1A0JD37 113 aa1.46□□□□□ -2.18
CHMP4A-208ENST00000534106 A6NED7 52 aa1.46□□□□□ -2.18
CHMP4A-208ENST00000534106 RPS29P62273 56 aaKnown RBP1.46□□□□□ -2.18
CHMP4A-208ENST00000534106 C1orf64Q8NEQ6 169 aa1.46□□□□□ -2.18
CHMP4A-208ENST00000534106 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
CHMP4A-208ENST00000534106 IGHV6-1A0A0B4J1U7 121 aa1.45□□□□□ -2.18
CHMP4A-208ENST00000534106 A8MUN3 132 aa1.45□□□□□ -2.18
CHMP4A-208ENST00000534106 NDUFB1O75438 58 aa1.45□□□□□ -2.18
CHMP4A-208ENST00000534106 ZNF706Q9Y5V0 76 aaPredicted RBP1.45□□□□□ -2.18
CHMP4A-208ENST00000534106 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
CHMP4A-208ENST00000534106 IGLV5-48A0A075B6I7 105 aa1.44□□□□□ -2.18
CHMP4A-208ENST00000534106 TRAV22A0A0B4J277 110 aa1.44□□□□□ -2.18
CHMP4A-208ENST00000534106 C20orf166-AS1Q96NR2 134 aa1.44□□□□□ -2.18
CHMP4A-208ENST00000534106 A8MWP4 228 aa1.43□□□□□ -2.18
CHMP4A-208ENST00000534106 PMAIP1Q13794 54 aa1.43□□□□□ -2.18
CHMP4A-208ENST00000534106 ATP11AUNQ6ZP68 121 aa1.43□□□□□ -2.18
CHMP4A-208ENST00000534106 COA5Q86WW8 74 aa1.43□□□□□ -2.18
CHMP4A-208ENST00000534106 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
CHMP4A-208ENST00000534106 A0A1B0GW54 56 aa1.42□□□□□ -2.18
CHMP4A-208ENST00000534106 SPRR1AP35321 89 aa1.42□□□□□ -2.18
CHMP4A-208ENST00000534106 Q1T7F1 81 aa1.42□□□□□ -2.18
CHMP4A-208ENST00000534106 PRR15Q8IV56 129 aa1.42□□□□□ -2.18
CHMP4A-208ENST00000534106 CYP4F30PQ9H0H9 118 aa1.42□□□□□ -2.18
CHMP4A-208ENST00000534106 MMP24-AS1A0A0U1RRL7 71 aa1.41□□□□□ -2.18
CHMP4A-208ENST00000534106 H3BPC8 53 aa1.41□□□□□ -2.18
CHMP4A-208ENST00000534106 CD164Q04900 197 aa1.41□□□□□ -2.18
CHMP4A-208ENST00000534106 Q5VV11 94 aa1.41□□□□□ -2.18
CHMP4A-208ENST00000534106 ZCCHC13Q8WW36 166 aaKnown RBP1.41□□□□□ -2.18
CHMP4A-208ENST00000534106 LIMD2Q9BT23 127 aa1.41□□□□□ -2.18
CHMP4A-208ENST00000534106 LCE3DQ9BYE3 92 aa1.41□□□□□ -2.18
CHMP4A-208ENST00000534106 C8orf17Q9NRJ1 99 aa1.41□□□□□ -2.18
CHMP4A-208ENST00000534106 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.19
CHMP4A-208ENST00000534106 A0A1B0GVX0 72 aa1.4□□□□□ -2.19
CHMP4A-208ENST00000534106 A6NN06 94 aa1.4□□□□□ -2.19
CHMP4A-208ENST00000534106 SPRR2EP22531 72 aa1.4□□□□□ -2.19
CHMP4A-208ENST00000534106 SPRR2BP35325 72 aa1.4□□□□□ -2.19
CHMP4A-208ENST00000534106 SPRR2AP35326 72 aa1.4□□□□□ -2.19
CHMP4A-208ENST00000534106 LOC101927531A0A1B0GV80 90 aa1.39□□□□□ -2.19
CHMP4A-208ENST00000534106 KTN1-AS1Q86SY8 53 aa1.39□□□□□ -2.19
CHMP4A-208ENST00000534106 SPANXA2-OT1Q8N9U9 137 aa1.39□□□□□ -2.19
CHMP4A-208ENST00000534106 MRPL34Q9BQ48 92 aaKnown RBP1.39□□□□□ -2.19
CHMP4A-208ENST00000534106 TP53AIP1Q9HCN2 124 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms