RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 A0A087WVE0 104 aa5.51□□□□□ -1.53
COPB1-209ENST00000533096 SPRR2DP22532 72 aa5.51□□□□□ -1.53
COPB1-209ENST00000533096 M0R143 59 aa5.5□□□□□ -1.53
COPB1-209ENST00000533096 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
COPB1-209ENST00000533096 H3BS24 57 aa5.47□□□□□ -1.53
COPB1-209ENST00000533096 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.54
COPB1-209ENST00000533096 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
COPB1-209ENST00000533096 MT1XP80297 61 aa5.45□□□□□ -1.54
COPB1-209ENST00000533096 PLAC4Q8WY50 150 aa5.44□□□□□ -1.54
COPB1-209ENST00000533096 H3BT86 120 aa5.43□□□□□ -1.54
COPB1-209ENST00000533096 BATFQ16520 125 aa5.43□□□□□ -1.54
COPB1-209ENST00000533096 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
COPB1-209ENST00000533096 TMA7Q9Y2S6 64 aaKnown RBP5.42□□□□□ -1.54
COPB1-209ENST00000533096 A8MUN3 132 aa5.41□□□□□ -1.54
COPB1-209ENST00000533096 NDUFC1O43677 76 aa5.4□□□□□ -1.54
COPB1-209ENST00000533096 ADM2Q7Z4H4 148 aa5.4□□□□□ -1.54
COPB1-209ENST00000533096 CYP4F30PQ9H0H9 118 aa5.4□□□□□ -1.54
COPB1-209ENST00000533096 TP53AIP1Q9HCN2 124 aa5.4□□□□□ -1.54
COPB1-209ENST00000533096 UBL5Q9BZL1 73 aa5.39□□□□□ -1.55
COPB1-209ENST00000533096 K7EP34 96 aa5.37□□□□□ -1.55
COPB1-209ENST00000533096 C9orf118A6NHY6 69 aa5.34□□□□□ -1.55
COPB1-209ENST00000533096 KRTAP12-2P59991 146 aa5.33□□□□□ -1.56
COPB1-209ENST00000533096 A0A1W2PPM0 123 aa5.32□□□□□ -1.56
COPB1-209ENST00000533096 H0YAA0 97 aa5.32□□□□□ -1.56
COPB1-209ENST00000533096 TAX1BP3O14907 124 aa5.28□□□□□ -1.56
COPB1-209ENST00000533096 R4GN34 69 aa5.27□□□□□ -1.57
COPB1-209ENST00000533096 LOC101927531A0A1B0GV80 90 aa5.26□□□□□ -1.57
COPB1-209ENST00000533096 TRAV22A0A0B4J277 110 aa5.25□□□□□ -1.57
COPB1-209ENST00000533096 ACYP1P07311 99 aa5.25□□□□□ -1.57
COPB1-209ENST00000533096 SPCS1Q9Y6A9 102 aa5.25□□□□□ -1.57
COPB1-209ENST00000533096 LINC01554Q52M75 96 aa5.24□□□□□ -1.57
COPB1-209ENST00000533096 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
COPB1-209ENST00000533096 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
COPB1-209ENST00000533096 M0QZ58 72 aa5.22□□□□□ -1.57
COPB1-209ENST00000533096 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
COPB1-209ENST00000533096 P0C880 135 aa5.2□□□□□ -1.58
COPB1-209ENST00000533096 KRTAP4-9Q9BYQ8 210 aa5.18□□□□□ -1.58
COPB1-209ENST00000533096 H0Y9P7 68 aa5.16□□□□□ -1.58
COPB1-209ENST00000533096 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
COPB1-209ENST00000533096 GPR98Q8WXG9 6306 aa5.14□□□□□ -1.59
COPB1-209ENST00000533096 C20orf197Q8N268 126 aa5.13□□□□□ -1.59
COPB1-209ENST00000533096 PRO0461Q9UI25 63 aa5.13□□□□□ -1.59
COPB1-209ENST00000533096 UQCRQO14949 82 aa5.12□□□□□ -1.59
COPB1-209ENST00000533096 SMIM6P0DI80 62 aa5.11□□□□□ -1.59
COPB1-209ENST00000533096 ATOX1O00244 68 aa5.1□□□□□ -1.59
COPB1-209ENST00000533096 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
COPB1-209ENST00000533096 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
COPB1-209ENST00000533096 LINC00208Q96KT6 92 aa5.07□□□□□ -1.6
COPB1-209ENST00000533096 HIST1H4AP62805 103 aaKnown RBP5.06□□□□□ -1.6
COPB1-209ENST00000533096 DSTQ03001 7570 aaKnown RBP5.02□□□□□ -1.61
COPB1-209ENST00000533096 MT-ATP8P03928 68 aa5.02□□□□□ -1.61
COPB1-209ENST00000533096 ETDBQ3ZM63 59 aa5.01□□□□□ -1.61
COPB1-209ENST00000533096 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
COPB1-209ENST00000533096 COL5A1-AS1Q5SY13 56 aa4.97□□□□□ -1.61
COPB1-209ENST00000533096 F8W1H4 67 aa4.95□□□□□ -1.62
COPB1-209ENST00000533096 MP68P56378 58 aa4.95□□□□□ -1.62
COPB1-209ENST00000533096 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
COPB1-209ENST00000533096 GTF2H5Q6ZYL4 71 aa4.93□□□□□ -1.62
COPB1-209ENST00000533096 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
COPB1-209ENST00000533096 MT4P47944 62 aa4.89□□□□□ -1.63
COPB1-209ENST00000533096 ATP5EP2Q5VTU8 51 aa4.88□□□□□ -1.63
COPB1-209ENST00000533096 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
COPB1-209ENST00000533096 KRTAP19-7Q3SYF9 63 aa4.87□□□□□ -1.63
COPB1-209ENST00000533096 DMAC1Q96GE9 116 aa4.87□□□□□ -1.63
COPB1-209ENST00000533096 MT1EP04732 61 aa4.85□□□□□ -1.63
COPB1-209ENST00000533096 OCR1Q9BZK8 76 aa4.84□□□□□ -1.63
COPB1-209ENST00000533096 CYSTM1Q9H1C7 97 aa4.84□□□□□ -1.63
COPB1-209ENST00000533096 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
COPB1-209ENST00000533096 LOC105371267A0A1B0GV96 52 aa4.81□□□□□ -1.64
COPB1-209ENST00000533096 TRAV7A0A075B6U4 112 aa4.76□□□□□ -1.65
COPB1-209ENST00000533096 FAM240AA0A1B0GVK7 77 aa4.76□□□□□ -1.65
COPB1-209ENST00000533096 LINC00643Q86TS7 51 aa4.76□□□□□ -1.65
COPB1-209ENST00000533096 H3BPC8 53 aa4.75□□□□□ -1.65
COPB1-209ENST00000533096 ACYP2P14621 99 aa4.75□□□□□ -1.65
COPB1-209ENST00000533096 SPTSSBQ8NFR3 76 aa4.75□□□□□ -1.65
COPB1-209ENST00000533096 MT1GP13640 62 aa4.74□□□□□ -1.65
COPB1-209ENST00000533096 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
COPB1-209ENST00000533096 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
COPB1-209ENST00000533096 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
COPB1-209ENST00000533096 PP632Q6XCG6 107 aa4.71□□□□□ -1.66
COPB1-209ENST00000533096 CHKB-CPT1BH3BT56 60 aa4.7□□□□□ -1.66
COPB1-209ENST00000533096 A0A0D9SG42 100 aa4.69□□□□□ -1.66
COPB1-209ENST00000533096 SCGB1A1P11684 91 aa4.69□□□□□ -1.66
COPB1-209ENST00000533096 KRTAP13-4Q3LI77 160 aa4.69□□□□□ -1.66
COPB1-209ENST00000533096 PCP4L1A6NKN8 68 aa4.65□□□□□ -1.67
COPB1-209ENST00000533096 MT1MQ8N339 61 aa4.65□□□□□ -1.67
COPB1-209ENST00000533096 AHNAK2Q8IVF2 5795 aa4.64□□□□□ -1.67
COPB1-209ENST00000533096 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
COPB1-209ENST00000533096 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
COPB1-209ENST00000533096 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
COPB1-209ENST00000533096 KRTAP5-7Q6L8G8 165 aa4.58□□□□□ -1.68
COPB1-209ENST00000533096 MT1LQ93083 61 aa4.58□□□□□ -1.68
COPB1-209ENST00000533096 SPINT4Q6UDR6 99 aa4.56□□□□□ -1.68
COPB1-209ENST00000533096 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
COPB1-209ENST00000533096 SPATA8Q6RVD6 105 aa4.48□□□□□ -1.69
COPB1-209ENST00000533096 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
COPB1-209ENST00000533096 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
COPB1-209ENST00000533096 SNURFQ9Y675 71 aa4.43□□□□□ -1.7
COPB1-209ENST00000533096 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
COPB1-209ENST00000533096 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms