RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 FAM236BA0A1B0GV22 79 aa5.9□□□□□ -1.46
HMGCS1-205ENST00000508319 S4R3F8 94 aa5.9□□□□□ -1.46
HMGCS1-205ENST00000508319 MT1BP07438 61 aa5.89□□□□□ -1.47
HMGCS1-205ENST00000508319 LCA10Q71F78 164 aa5.87□□□□□ -1.47
HMGCS1-205ENST00000508319 C1orf64Q8NEQ6 169 aa5.87□□□□□ -1.47
HMGCS1-205ENST00000508319 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
HMGCS1-205ENST00000508319 K7EP34 96 aa5.85□□□□□ -1.47
HMGCS1-205ENST00000508319 CSAG1Q6PB30 78 aa5.85□□□□□ -1.47
HMGCS1-205ENST00000508319 A6NN06 94 aa5.84□□□□□ -1.47
HMGCS1-205ENST00000508319 SEC61GP60059 68 aa5.84□□□□□ -1.47
HMGCS1-205ENST00000508319 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.47
HMGCS1-205ENST00000508319 COL5A1-AS1Q5SY13 56 aa5.83□□□□□ -1.48
HMGCS1-205ENST00000508319 Q5VV11 94 aa5.83□□□□□ -1.48
HMGCS1-205ENST00000508319 NEBP20929 6669 aa5.83□□□□□ -1.48
HMGCS1-205ENST00000508319 TP53AIP1Q9HCN2 124 aa5.82□□□□□ -1.48
HMGCS1-205ENST00000508319 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
HMGCS1-205ENST00000508319 KLKP1Q107X0 134 aa5.78□□□□□ -1.48
HMGCS1-205ENST00000508319 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
HMGCS1-205ENST00000508319 CYP4F30PQ9H0H9 118 aa5.75□□□□□ -1.49
HMGCS1-205ENST00000508319 A0A087WVE0 104 aa5.73□□□□□ -1.49
HMGCS1-205ENST00000508319 ETDBQ3ZM63 59 aa5.72□□□□□ -1.49
HMGCS1-205ENST00000508319 TRAV22A0A0B4J277 110 aa5.71□□□□□ -1.5
HMGCS1-205ENST00000508319 F8W1H4 67 aa5.71□□□□□ -1.5
HMGCS1-205ENST00000508319 GTF2H5Q6ZYL4 71 aa5.71□□□□□ -1.5
HMGCS1-205ENST00000508319 LOC101927531A0A1B0GV80 90 aa5.68□□□□□ -1.5
HMGCS1-205ENST00000508319 CRIPTQ9P021 101 aa5.67□□□□□ -1.5
HMGCS1-205ENST00000508319 KMT2DO14686 5537 aa5.65□□□□□ -1.5
HMGCS1-205ENST00000508319 KRTAP5-9P26371 169 aa5.65□□□□□ -1.5
HMGCS1-205ENST00000508319 IMUPQ9GZP8 106 aa5.63□□□□□ -1.51
HMGCS1-205ENST00000508319 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
HMGCS1-205ENST00000508319 H0YAA0 97 aa5.61□□□□□ -1.51
HMGCS1-205ENST00000508319 ATP5EP2Q5VTU8 51 aa5.6□□□□□ -1.51
HMGCS1-205ENST00000508319 H0Y9P7 68 aa5.59□□□□□ -1.51
HMGCS1-205ENST00000508319 UQCRQO14949 82 aa5.59□□□□□ -1.51
HMGCS1-205ENST00000508319 ACYP1P07311 99 aa5.59□□□□□ -1.51
HMGCS1-205ENST00000508319 FAM240AA0A1B0GVK7 77 aa5.58□□□□□ -1.52
HMGCS1-205ENST00000508319 ATOX1O00244 68 aa5.58□□□□□ -1.52
HMGCS1-205ENST00000508319 NDUFC1O43677 76 aa5.58□□□□□ -1.52
HMGCS1-205ENST00000508319 KRTAP20-1Q3LI63 56 aa5.58□□□□□ -1.52
HMGCS1-205ENST00000508319 HIST1H4AP62805 103 aaKnown RBP5.57□□□□□ -1.52
HMGCS1-205ENST00000508319 A8MUN3 132 aa5.53□□□□□ -1.52
HMGCS1-205ENST00000508319 ADM2Q7Z4H4 148 aa5.53□□□□□ -1.52
HMGCS1-205ENST00000508319 MT1XP80297 61 aa5.49□□□□□ -1.53
HMGCS1-205ENST00000508319 LINC00208Q96KT6 92 aa5.49□□□□□ -1.53
HMGCS1-205ENST00000508319 PRO2289Q9P1D8 64 aa5.46□□□□□ -1.54
HMGCS1-205ENST00000508319 LINC00643Q86TS7 51 aa5.45□□□□□ -1.54
HMGCS1-205ENST00000508319 OCR1Q9BZK8 76 aa5.45□□□□□ -1.54
HMGCS1-205ENST00000508319 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
HMGCS1-205ENST00000508319 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
HMGCS1-205ENST00000508319 MP68P56378 58 aa5.42□□□□□ -1.54
HMGCS1-205ENST00000508319 P0C880 135 aa5.41□□□□□ -1.54
HMGCS1-205ENST00000508319 PLAC4Q8WY50 150 aa5.41□□□□□ -1.54
HMGCS1-205ENST00000508319 R4GN34 69 aa5.39□□□□□ -1.55
HMGCS1-205ENST00000508319 KRTAP2-3P0C7H8 128 aa5.38□□□□□ -1.55
HMGCS1-205ENST00000508319 SPRR2EP22531 72 aa5.38□□□□□ -1.55
HMGCS1-205ENST00000508319 SPRR2BP35325 72 aa5.38□□□□□ -1.55
HMGCS1-205ENST00000508319 SPRR2AP35326 72 aa5.38□□□□□ -1.55
HMGCS1-205ENST00000508319 KRTAP2-4Q9BYR9 128 aa5.38□□□□□ -1.55
HMGCS1-205ENST00000508319 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
HMGCS1-205ENST00000508319 KRTAP8-1Q8IUC2 63 aa5.37□□□□□ -1.55
HMGCS1-205ENST00000508319 C20orf197Q8N268 126 aa5.36□□□□□ -1.55
HMGCS1-205ENST00000508319 DMAC1Q96GE9 116 aa5.36□□□□□ -1.55
HMGCS1-205ENST00000508319 M0QZ58 72 aa5.35□□□□□ -1.55
HMGCS1-205ENST00000508319 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
HMGCS1-205ENST00000508319 H3BPC8 53 aa5.32□□□□□ -1.56
HMGCS1-205ENST00000508319 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
HMGCS1-205ENST00000508319 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
HMGCS1-205ENST00000508319 A0A1B0GV90 55 aa5.27□□□□□ -1.57
HMGCS1-205ENST00000508319 V9GYY9 64 aa5.24□□□□□ -1.57
HMGCS1-205ENST00000508319 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
HMGCS1-205ENST00000508319 TRAV7A0A075B6U4 112 aa5.22□□□□□ -1.57
HMGCS1-205ENST00000508319 SCGB1A1P11684 91 aa5.22□□□□□ -1.57
HMGCS1-205ENST00000508319 SPRR2DP22532 72 aa5.2□□□□□ -1.58
HMGCS1-205ENST00000508319 KRTAP10-12P60413 245 aa5.2□□□□□ -1.58
HMGCS1-205ENST00000508319 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
HMGCS1-205ENST00000508319 KRTAP2-1Q9BYU5 128 aa5.2□□□□□ -1.58
HMGCS1-205ENST00000508319 J3QR89 54 aa5.19□□□□□ -1.58
HMGCS1-205ENST00000508319 ACYP2P14621 99 aa5.15□□□□□ -1.59
HMGCS1-205ENST00000508319 MT-ATP8P03928 68 aa5.12□□□□□ -1.59
HMGCS1-205ENST00000508319 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
HMGCS1-205ENST00000508319 CHKB-CPT1BH3BT56 60 aa5.05□□□□□ -1.6
HMGCS1-205ENST00000508319 SMIM20Q8N5G0 67 aa5.05□□□□□ -1.6
HMGCS1-205ENST00000508319 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
HMGCS1-205ENST00000508319 SNURFQ9Y675 71 aa5.01□□□□□ -1.61
HMGCS1-205ENST00000508319 SPANXA2-OT1Q8N9U9 137 aa4.96□□□□□ -1.62
HMGCS1-205ENST00000508319 K7ERU9 68 aa4.94□□□□□ -1.62
HMGCS1-205ENST00000508319 CAMK2N1Q7Z7J9 78 aa4.93□□□□□ -1.62
HMGCS1-205ENST00000508319 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
HMGCS1-205ENST00000508319 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
HMGCS1-205ENST00000508319 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
HMGCS1-205ENST00000508319 MT1EP04732 61 aa4.87□□□□□ -1.63
HMGCS1-205ENST00000508319 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
HMGCS1-205ENST00000508319 SERP2Q8N6R1 65 aa4.85□□□□□ -1.63
HMGCS1-205ENST00000508319 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
HMGCS1-205ENST00000508319 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.83□□□□□ -1.64
HMGCS1-205ENST00000508319 COA5Q86WW8 74 aa4.83□□□□□ -1.64
HMGCS1-205ENST00000508319 A0A0D9SG42 100 aa4.81□□□□□ -1.64
HMGCS1-205ENST00000508319 SMIM26A0A096LP01 95 aa4.78□□□□□ -1.64
HMGCS1-205ENST00000508319 PSPHP1O15172 72 aa4.78□□□□□ -1.64
HMGCS1-205ENST00000508319 SPATA8Q6RVD6 105 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms