RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-209ENST00000506632 CSAG1Q6PB30 78 aa4.12□□□□□ -1.75
PDLIM5-209ENST00000506632 CYP4F30PQ9H0H9 118 aa4.11□□□□□ -1.75
PDLIM5-209ENST00000506632 FAM236AA0A1B0GUQ0 79 aa4.1□□□□□ -1.75
PDLIM5-209ENST00000506632 FAM236BA0A1B0GV22 79 aa4.1□□□□□ -1.75
PDLIM5-209ENST00000506632 FAM240AA0A1B0GVK7 77 aa4.1□□□□□ -1.75
PDLIM5-209ENST00000506632 ACYP1P07311 99 aa4.1□□□□□ -1.75
PDLIM5-209ENST00000506632 MT1BP07438 61 aa4.1□□□□□ -1.75
PDLIM5-209ENST00000506632 SPRR2GQ9BYE4 73 aa4.1□□□□□ -1.75
PDLIM5-209ENST00000506632 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
PDLIM5-209ENST00000506632 TRAV22A0A0B4J277 110 aa4.09□□□□□ -1.75
PDLIM5-209ENST00000506632 KRTAP19-8Q3LI54 63 aa4.09□□□□□ -1.75
PDLIM5-209ENST00000506632 LOC101927531A0A1B0GV80 90 aa4.08□□□□□ -1.76
PDLIM5-209ENST00000506632 LCE5AQ5TCM9 118 aa4.08□□□□□ -1.76
PDLIM5-209ENST00000506632 ATP5EP2Q5VTU8 51 aa4.08□□□□□ -1.76
PDLIM5-209ENST00000506632 A0A087WVE0 104 aa4.06□□□□□ -1.76
PDLIM5-209ENST00000506632 KLKP1Q107X0 134 aa4.06□□□□□ -1.76
PDLIM5-209ENST00000506632 KRTAP6-3Q3LI67 103 aa4.06□□□□□ -1.76
PDLIM5-209ENST00000506632 V9GYY9 64 aa4.06□□□□□ -1.76
PDLIM5-209ENST00000506632 Q5VV11 94 aa4.05□□□□□ -1.76
PDLIM5-209ENST00000506632 UQCRQO14949 82 aa4.04□□□□□ -1.76
PDLIM5-209ENST00000506632 HIST1H4AP62805 103 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-209ENST00000506632 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
PDLIM5-209ENST00000506632 A6NN06 94 aa4.02□□□□□ -1.77
PDLIM5-209ENST00000506632 H0Y9P7 68 aa4.02□□□□□ -1.77
PDLIM5-209ENST00000506632 A0A1B0GV90 55 aa4.01□□□□□ -1.77
PDLIM5-209ENST00000506632 ATOX1O00244 68 aa4.01□□□□□ -1.77
PDLIM5-209ENST00000506632 KRTAP10-5P60370 271 aa4□□□□□ -1.77
PDLIM5-209ENST00000506632 LINC00643Q86TS7 51 aa4□□□□□ -1.77
PDLIM5-209ENST00000506632 H0YAA0 97 aa3.99□□□□□ -1.77
PDLIM5-209ENST00000506632 CRIPTQ9P021 101 aa3.99□□□□□ -1.77
PDLIM5-209ENST00000506632 IMUPQ9GZP8 106 aa3.98□□□□□ -1.77
PDLIM5-209ENST00000506632 A8MUN3 132 aa3.96□□□□□ -1.78
PDLIM5-209ENST00000506632 NDUFC1O43677 76 aa3.96□□□□□ -1.78
PDLIM5-209ENST00000506632 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
PDLIM5-209ENST00000506632 LINC00208Q96KT6 92 aa3.95□□□□□ -1.78
PDLIM5-209ENST00000506632 MP68P56378 58 aa3.91□□□□□ -1.78
PDLIM5-209ENST00000506632 NEBP20929 6669 aa3.9□□□□□ -1.79
PDLIM5-209ENST00000506632 ADM2Q7Z4H4 148 aa3.9□□□□□ -1.79
PDLIM5-209ENST00000506632 H3BPC8 53 aa3.88□□□□□ -1.79
PDLIM5-209ENST00000506632 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
PDLIM5-209ENST00000506632 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
PDLIM5-209ENST00000506632 DMAC1Q96GE9 116 aa3.86□□□□□ -1.79
PDLIM5-209ENST00000506632 J3QR89 54 aa3.85□□□□□ -1.79
PDLIM5-209ENST00000506632 P0C880 135 aa3.83□□□□□ -1.8
PDLIM5-209ENST00000506632 MT1XP80297 61 aa3.83□□□□□ -1.8
PDLIM5-209ENST00000506632 KMT2DO14686 5537 aa3.83□□□□□ -1.8
PDLIM5-209ENST00000506632 SMIM26A0A096LP01 95 aa3.8□□□□□ -1.8
PDLIM5-209ENST00000506632 SCGB1A1P11684 91 aa3.8□□□□□ -1.8
PDLIM5-209ENST00000506632 C20orf197Q8N268 126 aa3.8□□□□□ -1.8
PDLIM5-209ENST00000506632 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
PDLIM5-209ENST00000506632 R4GN34 69 aa3.8□□□□□ -1.8
PDLIM5-209ENST00000506632 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
PDLIM5-209ENST00000506632 CAMK2N1Q7Z7J9 78 aa3.78□□□□□ -1.8
PDLIM5-209ENST00000506632 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
PDLIM5-209ENST00000506632 TRAV7A0A075B6U4 112 aa3.76□□□□□ -1.81
PDLIM5-209ENST00000506632 M0QZ58 72 aa3.76□□□□□ -1.81
PDLIM5-209ENST00000506632 KRTAP12-2P59991 146 aa3.75□□□□□ -1.81
PDLIM5-209ENST00000506632 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
PDLIM5-209ENST00000506632 MT-ATP8P03928 68 aa3.74□□□□□ -1.81
PDLIM5-209ENST00000506632 PSPHP1O15172 72 aa3.73□□□□□ -1.81
PDLIM5-209ENST00000506632 KRTAP4-8A0A0G2JLE6 195 aa3.72□□□□□ -1.81
PDLIM5-209ENST00000506632 ACYP2P14621 99 aa3.72□□□□□ -1.81
PDLIM5-209ENST00000506632 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
PDLIM5-209ENST00000506632 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
PDLIM5-209ENST00000506632 SMIM20Q8N5G0 67 aa3.72□□□□□ -1.81
PDLIM5-209ENST00000506632 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
PDLIM5-209ENST00000506632 K7ERU9 68 aa3.7□□□□□ -1.82
PDLIM5-209ENST00000506632 LINC01554Q52M75 96 aa3.69□□□□□ -1.82
PDLIM5-209ENST00000506632 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
PDLIM5-209ENST00000506632 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
PDLIM5-209ENST00000506632 SPRR2EP22531 72 aa3.67□□□□□ -1.82
PDLIM5-209ENST00000506632 SPRR2BP35325 72 aa3.67□□□□□ -1.82
PDLIM5-209ENST00000506632 SPRR2AP35326 72 aa3.67□□□□□ -1.82
PDLIM5-209ENST00000506632 SPTSSBQ8NFR3 76 aa3.67□□□□□ -1.82
PDLIM5-209ENST00000506632 KRTAP2-3P0C7H8 128 aa3.66□□□□□ -1.82
PDLIM5-209ENST00000506632 KRTAP2-4Q9BYR9 128 aa3.66□□□□□ -1.82
PDLIM5-209ENST00000506632 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-209ENST00000506632 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
PDLIM5-209ENST00000506632 SNURFQ9Y675 71 aa3.64□□□□□ -1.83
PDLIM5-209ENST00000506632 CHKB-CPT1BH3BT56 60 aa3.63□□□□□ -1.83
PDLIM5-209ENST00000506632 MT3P25713 68 aa3.63□□□□□ -1.83
PDLIM5-209ENST00000506632 SPANXA2-OT1Q8N9U9 137 aa3.63□□□□□ -1.83
PDLIM5-209ENST00000506632 SERP2Q8N6R1 65 aa3.59□□□□□ -1.83
PDLIM5-209ENST00000506632 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
PDLIM5-209ENST00000506632 KRTAP13-4Q3LI77 160 aa3.58□□□□□ -1.84
PDLIM5-209ENST00000506632 ANAPC13Q9BS18 74 aa3.56□□□□□ -1.84
PDLIM5-209ENST00000506632 SPRR2DP22532 72 aa3.54□□□□□ -1.84
PDLIM5-209ENST00000506632 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
PDLIM5-209ENST00000506632 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
PDLIM5-209ENST00000506632 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
PDLIM5-209ENST00000506632 COA5Q86WW8 74 aa3.51□□□□□ -1.85
PDLIM5-209ENST00000506632 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
PDLIM5-209ENST00000506632 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
PDLIM5-209ENST00000506632 COX7CP15954 63 aa3.47□□□□□ -1.85
PDLIM5-209ENST00000506632 H7BZZ5 65 aa3.44□□□□□ -1.86
PDLIM5-209ENST00000506632 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
PDLIM5-209ENST00000506632 CYSTM1Q9H1C7 97 aa3.44□□□□□ -1.86
PDLIM5-209ENST00000506632 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
PDLIM5-209ENST00000506632 SERP1Q9Y6X1 66 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms