RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 V9GYY9 64 aa8.43□□□□□ -1.06
SMN1-204ENST00000506163 SSPOA2VEC9 5147 aa8.4□□□□□ -1.06
SMN1-204ENST00000506163 UQCRQO14949 82 aa8.39□□□□□ -1.07
SMN1-204ENST00000506163 LOC101927531A0A1B0GV80 90 aa8.36□□□□□ -1.07
SMN1-204ENST00000506163 H0Y9P7 68 aa8.35□□□□□ -1.07
SMN1-204ENST00000506163 J3QR89 54 aa8.34□□□□□ -1.07
SMN1-204ENST00000506163 S4R3F8 94 aa8.33□□□□□ -1.08
SMN1-204ENST00000506163 LCA10Q71F78 164 aa8.32□□□□□ -1.08
SMN1-204ENST00000506163 OCR1Q9BZK8 76 aa8.32□□□□□ -1.08
SMN1-204ENST00000506163 KRTAP19-1Q8IUB9 90 aa8.31□□□□□ -1.08
SMN1-204ENST00000506163 KRTAP4-2Q9BYR5 136 aa8.3□□□□□ -1.08
SMN1-204ENST00000506163 ATOX1O00244 68 aa8.29□□□□□ -1.08
SMN1-204ENST00000506163 KRTAP4-9Q9BYQ8 210 aa8.29□□□□□ -1.08
SMN1-204ENST00000506163 KLKP1Q107X0 134 aa8.24□□□□□ -1.09
SMN1-204ENST00000506163 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
SMN1-204ENST00000506163 LINC00208Q96KT6 92 aa8.24□□□□□ -1.09
SMN1-204ENST00000506163 PRO0628Q9UI54 55 aa8.2□□□□□ -1.1
SMN1-204ENST00000506163 FCGBPQ9Y6R7 5405 aaPredicted RBP8.2□□□□□ -1.1
SMN1-204ENST00000506163 MT-ATP8P03928 68 aa8.18□□□□□ -1.1
SMN1-204ENST00000506163 MP68P56378 58 aa8.16□□□□□ -1.1
SMN1-204ENST00000506163 FAM236AA0A1B0GUQ0 79 aa8.12□□□□□ -1.11
SMN1-204ENST00000506163 FAM236BA0A1B0GV22 79 aa8.12□□□□□ -1.11
SMN1-204ENST00000506163 RPS28P62857 69 aaKnown RBP8.11□□□□□ -1.11
SMN1-204ENST00000506163 IMUPQ9GZP8 106 aa8.11□□□□□ -1.11
SMN1-204ENST00000506163 KRTAP19-6Q3LI70 58 aa8.09□□□□□ -1.11
SMN1-204ENST00000506163 ANAPC13Q9BS18 74 aa8.08□□□□□ -1.12
SMN1-204ENST00000506163 A8MUN3 132 aa8.07□□□□□ -1.12
SMN1-204ENST00000506163 H3BPC8 53 aa8.07□□□□□ -1.12
SMN1-204ENST00000506163 KRTAP5-3Q6L8H2 238 aa8.05□□□□□ -1.12
SMN1-204ENST00000506163 NDUFC1O43677 76 aa8.03□□□□□ -1.12
SMN1-204ENST00000506163 SPRR2GQ9BYE4 73 aa8.03□□□□□ -1.12
SMN1-204ENST00000506163 MT1BP07438 61 aa7.98□□□□□ -1.13
SMN1-204ENST00000506163 KRTAP19-8Q3LI54 63 aa7.96□□□□□ -1.13
SMN1-204ENST00000506163 TRAV7A0A075B6U4 112 aa7.95□□□□□ -1.14
SMN1-204ENST00000506163 DMAC1Q96GE9 116 aa7.95□□□□□ -1.14
SMN1-204ENST00000506163 H3BS24 57 aa7.95□□□□□ -1.14
SMN1-204ENST00000506163 H0YAA0 97 aa7.94□□□□□ -1.14
SMN1-204ENST00000506163 Q5VV11 94 aa7.89□□□□□ -1.15
SMN1-204ENST00000506163 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
SMN1-204ENST00000506163 CRIPTQ9P021 101 aa7.87□□□□□ -1.15
SMN1-204ENST00000506163 KRTAP9-7A8MTY7 169 aa7.86□□□□□ -1.15
SMN1-204ENST00000506163 KRTAP4-11Q9BYQ6 195 aa7.86□□□□□ -1.15
SMN1-204ENST00000506163 MACF1Q9UPN3 7388 aaKnown RBP7.85□□□□□ -1.15
SMN1-204ENST00000506163 CCDC179H3BU77 68 aa7.82□□□□□ -1.16
SMN1-204ENST00000506163 SNURFQ9Y675 71 aa7.82□□□□□ -1.16
SMN1-204ENST00000506163 PMAIP1Q13794 54 aa7.79□□□□□ -1.16
SMN1-204ENST00000506163 P0C880 135 aa7.78□□□□□ -1.16
SMN1-204ENST00000506163 ACYP2P14621 99 aa7.76□□□□□ -1.17
SMN1-204ENST00000506163 SERP2Q8N6R1 65 aa7.75□□□□□ -1.17
SMN1-204ENST00000506163 A6NN06 94 aa7.73□□□□□ -1.17
SMN1-204ENST00000506163 C20orf197Q8N268 126 aa7.73□□□□□ -1.17
SMN1-204ENST00000506163 SYNE2Q8WXH0 6885 aaKnown RBP7.73□□□□□ -1.17
SMN1-204ENST00000506163 KRTAP10-5P60370 271 aa7.72□□□□□ -1.17
SMN1-204ENST00000506163 A0A0A0MQY5 61 aa7.7□□□□□ -1.18
SMN1-204ENST00000506163 SPANXA2-OT1Q8N9U9 137 aa7.65□□□□□ -1.18
SMN1-204ENST00000506163 TMEM258P61165 79 aa7.64□□□□□ -1.19
SMN1-204ENST00000506163 R4GN34 69 aa7.61□□□□□ -1.19
SMN1-204ENST00000506163 M0QZ58 72 aa7.59□□□□□ -1.19
SMN1-204ENST00000506163 CHKB-CPT1BH3BT56 60 aa7.58□□□□□ -1.2
SMN1-204ENST00000506163 COX7CP15954 63 aa7.56□□□□□ -1.2
SMN1-204ENST00000506163 SPTSSBQ8NFR3 76 aa7.56□□□□□ -1.2
SMN1-204ENST00000506163 KRTAP6-3Q3LI67 103 aa7.55□□□□□ -1.2
SMN1-204ENST00000506163 CYSTM1Q9H1C7 97 aa7.53□□□□□ -1.2
SMN1-204ENST00000506163 MT1XP80297 61 aa7.52□□□□□ -1.21
SMN1-204ENST00000506163 PLAC4Q8WY50 150 aa7.5□□□□□ -1.21
SMN1-204ENST00000506163 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
SMN1-204ENST00000506163 BRK1Q8WUW1 75 aa7.45□□□□□ -1.22
SMN1-204ENST00000506163 H7BZZ5 65 aa7.44□□□□□ -1.22
SMN1-204ENST00000506163 COA5Q86WW8 74 aa7.44□□□□□ -1.22
SMN1-204ENST00000506163 SMIM26A0A096LP01 95 aa7.44□□□□□ -1.22
SMN1-204ENST00000506163 SERP1Q9Y6X1 66 aa7.41□□□□□ -1.22
SMN1-204ENST00000506163 PRO2289Q9P1D8 64 aa7.39□□□□□ -1.23
SMN1-204ENST00000506163 KTN1-AS1Q86SY8 53 aa7.37□□□□□ -1.23
SMN1-204ENST00000506163 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
SMN1-204ENST00000506163 KMT2DO14686 5537 aa7.35□□□□□ -1.23
SMN1-204ENST00000506163 MUC12Q9UKN1 5478 aa7.33□□□□□ -1.24
SMN1-204ENST00000506163 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
SMN1-204ENST00000506163 KRTAP12-2P59991 146 aa7.25□□□□□ -1.25
SMN1-204ENST00000506163 NEBP20929 6669 aa7.24□□□□□ -1.25
SMN1-204ENST00000506163 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
SMN1-204ENST00000506163 ATP5EP56381 51 aaPredicted RBP7.19□□□□□ -1.26
SMN1-204ENST00000506163 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
SMN1-204ENST00000506163 MDN1Q9NU22 5596 aa7.18□□□□□ -1.26
SMN1-204ENST00000506163 LCE5AQ5TCM9 118 aa7.14□□□□□ -1.27
SMN1-204ENST00000506163 SPATA8Q6RVD6 105 aa7.13□□□□□ -1.27
SMN1-204ENST00000506163 KRTAP10-12P60413 245 aa7.12□□□□□ -1.27
SMN1-204ENST00000506163 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
SMN1-204ENST00000506163 A0A1B0GU33 70 aa7.1□□□□□ -1.27
SMN1-204ENST00000506163 PSPHP1O15172 72 aa7.1□□□□□ -1.27
SMN1-204ENST00000506163 SPRR2FQ96RM1 72 aa7.1□□□□□ -1.27
SMN1-204ENST00000506163 A0A0D9SG42 100 aa7.09□□□□□ -1.28
SMN1-204ENST00000506163 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
SMN1-204ENST00000506163 A0A1B0GU69 56 aa7.01□□□□□ -1.29
SMN1-204ENST00000506163 CAMK2N1Q7Z7J9 78 aa7.01□□□□□ -1.29
SMN1-204ENST00000506163 KRTAP12-1P59990 96 aa6.97□□□□□ -1.29
SMN1-204ENST00000506163 SPRR2EP22531 72 aa6.95□□□□□ -1.3
SMN1-204ENST00000506163 SPRR2BP35325 72 aa6.95□□□□□ -1.3
SMN1-204ENST00000506163 SPRR2AP35326 72 aa6.95□□□□□ -1.3
SMN1-204ENST00000506163 SPINT4Q6UDR6 99 aa6.95□□□□□ -1.3
SMN1-204ENST00000506163 LCE1AQ5T7P2 110 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms